CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 181 & Codon = Tcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2181P181SP361SnonsynCccTcc311431130.9996791346-1348

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2181P181SCccTcc31133114All0.000595
ORF1ab/nsp2181P181SCccTcc20562056B.1.1.70.001841
ORF1ab/nsp2181P181SCccTcc143143AY.420.005753
ORF1ab/nsp2181P181SCccTcc135135B.1.1.2980.116379
ORF1ab/nsp2181P181SCccTcc112112AY.40.000174
ORF1ab/nsp2181P181SCccTcc3838AY.250.000229
ORF1ab/nsp2181P181SCccTcc3738B.1.617.20.000139
ORF1ab/nsp2181P181SCccTcc3535B.1.20.000308
ORF1ab/nsp2181P181SCccTcc3131AY.4.50.003332
ORF1ab/nsp2181P181SCccTcc3030AY.1160.008603
ORF1ab/nsp2181P181SCccTcc2727P.1.170.004368
ORF1ab/nsp2181P181SCccTcc2626Q.80.004288
ORF1ab/nsp2181P181SCccTcc2424B.10.00022
ORF1ab/nsp2181P181SCccTcc2222AY.430.000097
ORF1ab/nsp2181P181SCccTcc2020P.10.000315
ORF1ab/nsp2181P181SCccTcc1818B.310.067164
ORF1ab/nsp2181P181SCccTcc1717AY.1030.000106
ORF1ab/nsp2181P181SCccTcc1616AY.440.000097
ORF1ab/nsp2181P181SCccTcc1313B.1.4290.000306
ORF1ab/nsp2181P181SCccTcc1212AY.260.00034
ORF1ab/nsp2181P181SCccTcc1111AY.50.000227
ORF1ab/nsp2181P181SCccTcc1111B.1.1600.000343
ORF1ab/nsp2181P181SCccTcc1010AY.5.30.003374
ORF1ab/nsp2181P181SCccTcc1010AY.960.020747
ORF1ab/nsp2181P181SCccTcc99AY.46.30.008403
ORF1ab/nsp2181P181SCccTcc99Q.10.001137
ORF1ab/nsp2181P181SCccTcc88AY.1190.000282
ORF1ab/nsp2181P181SCccTcc88AY.30.00008
ORF1ab/nsp2181P181SCccTcc88AY.390.000198
ORF1ab/nsp2181P181SCccTcc88B.1.1770.000105
ORF1ab/nsp2181P181SCccTcc88B.1.2580.000532
ORF1ab/nsp2181P181SCccTcc88Q.20.004908
ORF1ab/nsp2181P181SCccTcc77AY.99.20.000645
ORF1ab/nsp2181P181SCccTcc77B.1.10.000127
ORF1ab/nsp2181P181SCccTcc66AY.46.60.000433
ORF1ab/nsp2181P181SCccTcc66B.1.2210.000426
ORF1ab/nsp2181P181SCccTcc66P.20.00112
ORF1ab/nsp2181P181SCccTcc55AY.1020.000133
ORF1ab/nsp2181P181SCccTcc55AY.610.000524
ORF1ab/nsp2181P181SCccTcc55B.1.1.5190.000199
ORF1ab/nsp2181P181SCccTcc55B.1.2400.001078
ORF1ab/nsp2181P181SCccTcc44AY.4.20.000087
ORF1ab/nsp2181P181SCccTcc44B.1.1.2140.000222
ORF1ab/nsp2181P181SCccTcc44B.1.5750.001214
ORF1ab/nsp2181P181SCccTcc33AY.20.001068
ORF1ab/nsp2181P181SCccTcc33AY.980.000237
ORF1ab/nsp2181P181SCccTcc33AY.99.10.004658
ORF1ab/nsp2181P181SCccTcc33B.1.1.1610.010601
ORF1ab/nsp2181P181SCccTcc33B.1.1.330.001263
ORF1ab/nsp2181P181SCccTcc33B.1.1050.028846
ORF1ab/nsp2181P181SCccTcc33B.1.5260.000071
ORF1ab/nsp2181P181SCccTcc220.111111
ORF1ab/nsp2181P181SCccTcc22A.270.003311
ORF1ab/nsp2181P181SCccTcc22AY.1000.000092
ORF1ab/nsp2181P181SCccTcc22AY.1130.000285
ORF1ab/nsp2181P181SCccTcc22AY.230.000139
ORF1ab/nsp2181P181SCccTcc22AY.270.000129
ORF1ab/nsp2181P181SCccTcc22AY.3.10.000171
ORF1ab/nsp2181P181SCccTcc22AY.380.000999
ORF1ab/nsp2181P181SCccTcc22AY.510.001818
ORF1ab/nsp2181P181SCccTcc22AY.60.000082
ORF1ab/nsp2181P181SCccTcc22AY.750.000112
ORF1ab/nsp2181P181SCccTcc22AY.98.10.000097
ORF1ab/nsp2181P181SCccTcc22B.1.1.620.054054
ORF1ab/nsp2181P181SCccTcc22B.1.1100.00905
ORF1ab/nsp2181P181SCccTcc22B.1.1110.00235
ORF1ab/nsp2181P181SCccTcc22B.1.177.460.001837
ORF1ab/nsp2181P181SCccTcc22B.1.2220.003384
ORF1ab/nsp2181P181SCccTcc22B.1.2430.000139
ORF1ab/nsp2181P181SCccTcc22B.1.2890.005319
ORF1ab/nsp2181P181SCccTcc22B.1.3110.000549
ORF1ab/nsp2181P181SCccTcc22B.1.360.000292
ORF1ab/nsp2181P181SCccTcc22P.1.100.000539
ORF1ab/nsp2181P181SCccTcc22P.1.150.000465
ORF1ab/nsp2181P181SCccTcc22P.1.160.000748
ORF1ab/nsp2181P181SCccTcc11A.2.40.003367
ORF1ab/nsp2181P181SCccTcc11A.23.10.000704
ORF1ab/nsp2181P181SCccTcc11AY.1070.000466
ORF1ab/nsp2181P181SCccTcc11AY.1110.000183
ORF1ab/nsp2181P181SCccTcc11AY.1200.000037
ORF1ab/nsp2181P181SCccTcc11AY.130.000161
ORF1ab/nsp2181P181SCccTcc11AY.160.00038
ORF1ab/nsp2181P181SCccTcc11AY.16.10.00047
ORF1ab/nsp2181P181SCccTcc11AY.240.000431
ORF1ab/nsp2181P181SCccTcc11AY.290.000016
ORF1ab/nsp2181P181SCccTcc11AY.330.000067
ORF1ab/nsp2181P181SCccTcc11AY.34.10.00051
ORF1ab/nsp2181P181SCccTcc11AY.360.000148
ORF1ab/nsp2181P181SCccTcc11AY.39.10.00004
ORF1ab/nsp2181P181SCccTcc11AY.410.000294
ORF1ab/nsp2181P181SCccTcc11AY.450.000122
ORF1ab/nsp2181P181SCccTcc11AY.460.000104
ORF1ab/nsp2181P181SCccTcc11AY.5.40.000277
ORF1ab/nsp2181P181SCccTcc11AY.530.000288
ORF1ab/nsp2181P181SCccTcc11AY.550.000917
ORF1ab/nsp2181P181SCccTcc11AY.680.000274
ORF1ab/nsp2181P181SCccTcc11AY.7.10.000113
ORF1ab/nsp2181P181SCccTcc11AY.790.001211
ORF1ab/nsp2181P181SCccTcc11AY.9.10.000084
ORF1ab/nsp2181P181SCccTcc11AY.9.20.000037
ORF1ab/nsp2181P181SCccTcc11AZ.30.00152
ORF1ab/nsp2181P181SCccTcc11B0.000128
ORF1ab/nsp2181P181SCccTcc11B.1.1.1890.001513
ORF1ab/nsp2181P181SCccTcc11B.1.1.2220.000204
ORF1ab/nsp2181P181SCccTcc11B.1.1.2410.00207
ORF1ab/nsp2181P181SCccTcc11B.1.1.2730.006757
ORF1ab/nsp2181P181SCccTcc11B.1.1.280.000311
ORF1ab/nsp2181P181SCccTcc11B.1.1.3170.000412
ORF1ab/nsp2181P181SCccTcc11B.1.1.340.013158
ORF1ab/nsp2181P181SCccTcc11B.1.1.4320.001266
ORF1ab/nsp2181P181SCccTcc11B.1.160.70.002079
ORF1ab/nsp2181P181SCccTcc11B.1.177.150.000631
ORF1ab/nsp2181P181SCccTcc11B.1.177.810.000189
ORF1ab/nsp2181P181SCccTcc11B.1.2340.000132
ORF1ab/nsp2181P181SCccTcc11B.1.3360.002439
ORF1ab/nsp2181P181SCccTcc11B.1.351.20.000303
ORF1ab/nsp2181P181SCccTcc11B.1.351.30.000876
ORF1ab/nsp2181P181SCccTcc11B.1.3670.000792
ORF1ab/nsp2181P181SCccTcc11B.1.3690.000285
ORF1ab/nsp2181P181SCccTcc11B.1.3890.001002
ORF1ab/nsp2181P181SCccTcc11B.1.4040.001302
ORF1ab/nsp2181P181SCccTcc11B.1.4090.000781
ORF1ab/nsp2181P181SCccTcc11B.1.4270.00005
ORF1ab/nsp2181P181SCccTcc11B.1.438.10.000107
ORF1ab/nsp2181P181SCccTcc11B.1.466.20.000391
ORF1ab/nsp2181P181SCccTcc11B.1.5960.000087
ORF1ab/nsp2181P181SCccTcc11B.1.6090.000479
ORF1ab/nsp2181P181SCccTcc11B.1.617.10.000129
ORF1ab/nsp2181P181SCccTcc11B.1.6210.000089
ORF1ab/nsp2181P181SCccTcc11B.1.6280.000352
ORF1ab/nsp2181P181SCccTcc11B.1.910.002075
ORF1ab/nsp2181P181SCccTcc11B.40.002208
ORF1ab/nsp2181P181SCccTcc11C.140.004329
ORF1ab/nsp2181P181SCccTcc11C.36.30.000567
ORF1ab/nsp2181P181SCccTcc11C.370.000116