CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 174

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2174A174VA354VnonsyngCcgTc152415010.9849081325-1327
ORF1ab/nsp2174A174VA354VnonsyngCCgTG1524200.01312341325-1327
ORF1ab/nsp2174A174VA354VnonsyngCCgTT152430.00196851325-1327
ORF1ab/nsp2174A174AA354AsyngcCgcT139513380.959141325-1327
ORF1ab/nsp2174A174AA354AsyngcCgcA1395390.0279571325-1327
ORF1ab/nsp2174A174AA354AsyngcCgcG1395180.01290321325-1327
ORF1ab/nsp2174A174SA354SnonsynGccTcc2702550.9444441325-1327
ORF1ab/nsp2174A174SA354SnonsynGcCTcG270130.04814811325-1327
ORF1ab/nsp2174A174SA354SnonsynGCcAGc27010.00370371325-1327
ORF1ab/nsp2174A174SA354SnonsynGcCTcT27010.00370371325-1327
ORF1ab/nsp2174A174TA354TnonsynGccAcc1391370.9856111325-1327
ORF1ab/nsp2174A174TA354TnonsynGcCAcA13910.007194241325-1327
ORF1ab/nsp2174A174TA354TnonsynGcCAcT13910.007194241325-1327
ORF1ab/nsp2174A174DA354DnonsyngCcgAc555511325-1327
ORF1ab/nsp2174A174delA354deldelGCC---424211325-1327
ORF1ab/nsp2174A174FA354FnonsynGCcTTc19150.7894741325-1327
ORF1ab/nsp2174A174FA354FnonsynGCCTTT1940.2105261325-1327
ORF1ab/nsp2174A174LA354LnonsynGCCTTG18170.9444441325-1327
ORF1ab/nsp2174A174LA354LnonsynGCcCTc1810.05555561325-1327
ORF1ab/nsp2174A174GA354GnonsyngCcgGc14100.7142861325-1327
ORF1ab/nsp2174A174GA354GnonsyngCCgGG1430.2142861325-1327
ORF1ab/nsp2174A174GA354GnonsyngCCgGT1410.07142861325-1327
ORF1ab/nsp2174A174CA354CnonsynGCcTGc530.61325-1327
ORF1ab/nsp2174A174CA354CnonsynGCCTGT520.41325-1327
ORF1ab/nsp2174A174WA354WnonsynGCCTGG4411325-1327
ORF1ab/nsp2174A174PA354PnonsynGccCcc3311325-1327
ORF1ab/nsp2174A174IA354InonsynGCcATc320.6666671325-1327
ORF1ab/nsp2174A174IA354InonsynGCCATT310.3333331325-1327
ORF1ab/nsp2174A174del1A354del1delGcc-cc2211325-1327
ORF1ab/nsp2174A174NA354NnonsynGCcAAc1111325-1327
ORF1ab/nsp2174A174EA354EnonsyngCCgAA1111325-1327
ORF1ab/nsp2174A174del2A354del2delgCCg--1111325-1327

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2174A174VgCcgTc15011524All0.000287
ORF1ab/nsp2174A174VgCCgTG201524All0.000004
ORF1ab/nsp2174A174VgCCgTT31524All0.000001
ORF1ab/nsp2174A174AgcCgcT13381395All0.000256
ORF1ab/nsp2174A174AgcCgcA391395All0.000007
ORF1ab/nsp2174A174AgcCgcG181395All0.000003
ORF1ab/nsp2174A174AgcCgcT905905AY.430.00401
ORF1ab/nsp2174A174SGccTcc255270All0.000049
ORF1ab/nsp2174A174SGcCTcG13270All0.000002
ORF1ab/nsp2174A174SGcCTcT1270All0
ORF1ab/nsp2174A174SGCcAGc1270All0
ORF1ab/nsp2174A174VgCcgTc263266B.1.1.70.000235
ORF1ab/nsp2174A174VgCCgTG3266B.1.1.70.000003
ORF1ab/nsp2174A174VgCcgTc207207AY.40.000322
ORF1ab/nsp2174A174VgCcgTc143144AY.440.00087
ORF1ab/nsp2174A174VgCCgTG1144AY.440.000006
ORF1ab/nsp2174A174TGccAcc137139All0.000026
ORF1ab/nsp2174A174TGcCAcA1139All0
ORF1ab/nsp2174A174TGcCAcT1139All0
ORF1ab/nsp2174A174VgCcgTc137137B.1.617.20.000516
ORF1ab/nsp2174A174VgCcgTc113113B.1.5410.5
ORF1ab/nsp2174A174VgCcgTc6363AY.430.000279
ORF1ab/nsp2174A174SGccTcc5959AY.40.000092
ORF1ab/nsp2174A174AgcCgcT5057B.1.1.70.000045
ORF1ab/nsp2174A174AgcCgcA457B.1.1.70.000004
ORF1ab/nsp2174A174AgcCgcG357B.1.1.70.000003
ORF1ab/nsp2174A174DgCcgAc5555All0.000011
ORF1ab/nsp2174A174SGccTcc5254AY.1030.000323
ORF1ab/nsp2174A174SGcCTcG254AY.1030.000012
ORF1ab/nsp2174A174VgCcgTc4554AY.250.000271
ORF1ab/nsp2174A174VgCCgTG954AY.250.000054
ORF1ab/nsp2174A174VgCcgTc5151B.1.1.4670.980769
ORF1ab/nsp2174A174VgCcgTc4850AY.30.000477
ORF1ab/nsp2174A174VgCCgTG150AY.30.00001
ORF1ab/nsp2174A174VgCCgTT150AY.30.00001
ORF1ab/nsp2174A174SGccTcc4649B.1.1.70.000041
ORF1ab/nsp2174A174SGcCTcG349B.1.1.70.000003
ORF1ab/nsp2174A174VgCcgTc4444B.1.360.00642
ORF1ab/nsp2174A174delGCC---4242All0.000008
ORF1ab/nsp2174A174AgcCgcT3437B.10.000311
ORF1ab/nsp2174A174AgcCgcA337B.10.000027
ORF1ab/nsp2174A174AgcCgcT3033AY.40.000047
ORF1ab/nsp2174A174AgcCgcA333AY.40.000005
ORF1ab/nsp2174A174AgcCgcT2833B.1.617.20.000105
ORF1ab/nsp2174A174AgcCgcA533B.1.617.20.000019
ORF1ab/nsp2174A174VgCcgTc3232AY.390.000791
ORF1ab/nsp2174A174AgcCgcT3232B.1.1.5190.001271
ORF1ab/nsp2174A174AgcCgcT1424AY.250.000084
ORF1ab/nsp2174A174AgcCgcG724AY.250.000042
ORF1ab/nsp2174A174AgcCgcA324AY.250.000018
ORF1ab/nsp2174A174TGccAcc2424AY.30.000239
ORF1ab/nsp2174A174VgCcgTc2222B.1.36.170.01087
ORF1ab/nsp2174A174VgCcgTc2121B.1.20.000185
ORF1ab/nsp2174A174SGccTcc2020AY.39.10.000792
ORF1ab/nsp2174A174SGccTcc1920P.10.000299
ORF1ab/nsp2174A174SGcCTcG120P.10.000016
ORF1ab/nsp2174A174FGCcTTc1519All0.000003
ORF1ab/nsp2174A174FGCCTTT419All0.000001
ORF1ab/nsp2174A174LGCCTTG1718All0.000003
ORF1ab/nsp2174A174LGCcCTc118All0
ORF1ab/nsp2174A174VgCcgTc1618AY.1030.000099
ORF1ab/nsp2174A174VgCCgTG218AY.1030.000012
ORF1ab/nsp2174A174AgcCgcT1317AY.1030.000081
ORF1ab/nsp2174A174AgcCgcG217AY.1030.000012
ORF1ab/nsp2174A174AgcCgcA217AY.1030.000012
ORF1ab/nsp2174A174VgCcgTc1717B.1.10.000308
ORF1ab/nsp2174A174AgcCgcT1016AY.1020.000265
ORF1ab/nsp2174A174AgcCgcA616AY.1020.000159
ORF1ab/nsp2174A174VgCcgTc1616B.10.000147
ORF1ab/nsp2174A174AgcCgcT1515AY.99.20.001382
ORF1ab/nsp2174A174AgcCgcT1515B.1.20.000132
ORF1ab/nsp2174A174TGccAcc1515B.1.617.20.000056
ORF1ab/nsp2174A174GgCcgGc1014All0.000002
ORF1ab/nsp2174A174GgCCgGG314All0.000001
ORF1ab/nsp2174A174GgCCgGT114All0
ORF1ab/nsp2174A174AgcCgcT1414AY.4.10.010324
ORF1ab/nsp2174A174DgCcgAc1414AY.510.012727
ORF1ab/nsp2174A174VgCcgTc1414B.1.1.5190.000556
ORF1ab/nsp2174A174TGccAcc1313B.1.1.70.000012
ORF1ab/nsp2174A174AgcCgcT1012AY.260.000283
ORF1ab/nsp2174A174AgcCgcG212AY.260.000057
ORF1ab/nsp2174A174SGccTcc1111AY.290.000174
ORF1ab/nsp2174A174AgcCgcT1111AY.290.000174
ORF1ab/nsp2174A174TGccAcc1111AY.40.000017
ORF1ab/nsp2174A174VgCcgTc810AY.1000.000368
ORF1ab/nsp2174A174VgCCgTG110AY.1000.000046
ORF1ab/nsp2174A174VgCCgTT110AY.1000.000046
ORF1ab/nsp2174A174TGccAcc1010AY.430.000044
ORF1ab/nsp2174A174VgCcgTc1010B.1.1.2070.01182
ORF1ab/nsp2174A174DgCcgAc1010B.1.1.70.000009
ORF1ab/nsp2174A174AgcCgcT1010B.1.2210.00071
ORF1ab/nsp2174A174AgcCgcT1010B.1.4290.000235
ORF1ab/nsp2174A174VgCcgTc99AY.1020.000239
ORF1ab/nsp2174A174VgCcgTc99B.1.2580.000599
ORF1ab/nsp2174A174VgCcgTc88AY.290.000126
ORF1ab/nsp2174A174VgCcgTc88B.1.2210.000568
ORF1ab/nsp2174A174VgCcgTc78P.10.00011
ORF1ab/nsp2174A174VgCCgTG18P.10.000016
ORF1ab/nsp2174A174AgcCgcT88P.30.012759
ORF1ab/nsp2174A174SGccTcc47AY.250.000024
ORF1ab/nsp2174A174SGcCTcG37AY.250.000018
ORF1ab/nsp2174A174AgcCgcT47AY.440.000024
ORF1ab/nsp2174A174AgcCgcA27AY.440.000012
ORF1ab/nsp2174A174AgcCgcG17AY.440.000006
ORF1ab/nsp2174A174AgcCgcT77B.1.10.000127
ORF1ab/nsp2174A174delGCC---77B.1.1.70.000006
ORF1ab/nsp2174A174DgCcgAc77P.10.00011
ORF1ab/nsp2174A174GgCcgGc46AY.250.000024
ORF1ab/nsp2174A174GgCCgGG26AY.250.000012
ORF1ab/nsp2174A174VgCcgTc46AY.260.000113
ORF1ab/nsp2174A174VgCCgTG26AY.260.000057
ORF1ab/nsp2174A174VgCcgTc66AY.330.000401
ORF1ab/nsp2174A174AgcCgcA36AY.390.000074
ORF1ab/nsp2174A174AgcCgcT36AY.390.000074
ORF1ab/nsp2174A174SGccTcc56B.10.000046
ORF1ab/nsp2174A174SGCcAGc16B.10.000009
ORF1ab/nsp2174A174TGccAcc66B.1.10.000109
ORF1ab/nsp2174A174AgcCgcT66B.1.3960.004234
ORF1ab/nsp2174A174VgCcgTc66B.1.4290.000141
ORF1ab/nsp2174A174SGccTcc66P.1.150.001394
ORF1ab/nsp2174A174CGCcTGc35All0.000001
ORF1ab/nsp2174A174CGCCTGT25All0
ORF1ab/nsp2174A174VgCcgTc55AY.1190.000177
ORF1ab/nsp2174A174SGccTcc55AY.1210.000677
ORF1ab/nsp2174A174VgCcgTc55AY.190.005701
ORF1ab/nsp2174A174LGCCTTG55AY.250.00003
ORF1ab/nsp2174A174FGCcTTc55AY.250.00003
ORF1ab/nsp2174A174SGccTcc35AY.260.000085
ORF1ab/nsp2174A174SGcCTcG25AY.260.000057
ORF1ab/nsp2174A174TGccAcc55AY.290.000079
ORF1ab/nsp2174A174DgCcgAc55AY.390.000124
ORF1ab/nsp2174A174AgcCgcT55AY.39.10.000198
ORF1ab/nsp2174A174VgCcgTc55AY.4.20.000108
ORF1ab/nsp2174A174VgCcgTc55AY.470.000156
ORF1ab/nsp2174A174AgcCgcT55AY.540.000477
ORF1ab/nsp2174A174VgCcgTc55AY.60.000206
ORF1ab/nsp2174A174VgCcgTc55B.1.1.2180.038462
ORF1ab/nsp2174A174VgCcgTc55B.1.1.280.001556
ORF1ab/nsp2174A174delGCC---55B.1.1.330.002104
ORF1ab/nsp2174A174TGccAcc55B.1.1.5190.000199
ORF1ab/nsp2174A174DgCcgAc55B.1.617.20.000019
ORF1ab/nsp2174A174VgCcgTc55C.370.00058
ORF1ab/nsp2174A174AgcCgcT45P.10.000063
ORF1ab/nsp2174A174AgcCgcG15P.10.000016
ORF1ab/nsp2174A174WGCCTGG44All0.000001
ORF1ab/nsp2174A174VgCcgTc44AY.270.000259
ORF1ab/nsp2174A174VgCcgTc44AY.4.50.00043
ORF1ab/nsp2174A174VgCcgTc44AY.750.000224
ORF1ab/nsp2174A174AgcCgcT44AY.750.000224
ORF1ab/nsp2174A174LGCCTTG44B.1.1.70.000004
ORF1ab/nsp2174A174FGCcTTc34B.1.1.70.000003
ORF1ab/nsp2174A174FGCCTTT14B.1.1.70.000001
ORF1ab/nsp2174A174AgcCgcT44B.1.2340.000528
ORF1ab/nsp2174A174VgCcgTc44B.1.4090.003125
ORF1ab/nsp2174A174AgcCgcT44B.1.4270.000202
ORF1ab/nsp2174A174TGccAcc44B.1.5600.018519
ORF1ab/nsp2174A174VgCcgTc44B.1.6210.000354
ORF1ab/nsp2174A174VgCcgTc33A.10.000846
ORF1ab/nsp2174A174PGccCcc33All0.000001
ORF1ab/nsp2174A174IGCcATc23All0
ORF1ab/nsp2174A174IGCCATT13All0
ORF1ab/nsp2174A174GgCCgGT13AY.1000.000046
ORF1ab/nsp2174A174GgCcgGc13AY.1000.000046
ORF1ab/nsp2174A174GgCCgGG13AY.1000.000046
ORF1ab/nsp2174A174AgcCgcT33AY.1130.000427
ORF1ab/nsp2174A174VgCcgTc33AY.1180.000188
ORF1ab/nsp2174A174AgcCgcT33AY.200.000117
ORF1ab/nsp2174A174AgcCgcT23AY.30.00002
ORF1ab/nsp2174A174AgcCgcG13AY.30.00001
ORF1ab/nsp2174A174VgCcgTc33AY.350.000699
ORF1ab/nsp2174A174AgcCgcT33AY.4.20.000065
ORF1ab/nsp2174A174TGccAcc33AY.440.000018
ORF1ab/nsp2174A174GgCcgGc33AY.440.000018
ORF1ab/nsp2174A174SGccTcc23AY.440.000012
ORF1ab/nsp2174A174SGcCTcG13AY.440.000006
ORF1ab/nsp2174A174TGccAcc33AY.460.000312
ORF1ab/nsp2174A174VgCcgTc33AY.50.000062
ORF1ab/nsp2174A174VgCcgTc33AY.680.000821
ORF1ab/nsp2174A174VgCcgTc33AY.980.000237
ORF1ab/nsp2174A174TGccAcc33B.10.000027
ORF1ab/nsp2174A174delGCC---33B.1.1.3480.002389
ORF1ab/nsp2174A174VgCcgTc33B.1.177.460.002755
ORF1ab/nsp2174A174AgcCgcT23B.1.5260.000047
ORF1ab/nsp2174A174AgcCgcG13B.1.5260.000024
ORF1ab/nsp2174A174SGccTcc33B.1.617.20.000011
ORF1ab/nsp2174A174AgcCgcT220.111111
ORF1ab/nsp2174A174VgCcgTc22A.23.10.001408
ORF1ab/nsp2174A174del1Gcc-cc22All0
ORF1ab/nsp2174A174AgcCgcT22AY.1000.000092
ORF1ab/nsp2174A174CGCcTGc12AY.1000.000046
ORF1ab/nsp2174A174FGCcTTc12AY.1000.000046
ORF1ab/nsp2174A174CGCCTGT12AY.1000.000046
ORF1ab/nsp2174A174FGCCTTT12AY.1000.000046
ORF1ab/nsp2174A174LGCCTTG22AY.1030.000012
ORF1ab/nsp2174A174FGCcTTc22AY.1030.000012
ORF1ab/nsp2174A174AgcCgcA12AY.1190.000035
ORF1ab/nsp2174A174AgcCgcT12AY.1190.000035
ORF1ab/nsp2174A174VgCcgTc22AY.1200.000074
ORF1ab/nsp2174A174SGccTcc22AY.1200.000074
ORF1ab/nsp2174A174VgCcgTc22AY.120.10.000642
ORF1ab/nsp2174A174VgCcgTc22AY.160.000759
ORF1ab/nsp2174A174VgCcgTc22AY.230.000139
ORF1ab/nsp2174A174DgCcgAc22AY.250.000012
ORF1ab/nsp2174A174CGCcTGc22AY.250.000012
ORF1ab/nsp2174A174WGCCTGG22AY.250.000012
ORF1ab/nsp2174A174TGccAcc22AY.250.000012
ORF1ab/nsp2174A174FGCcTTc22AY.260.000057
ORF1ab/nsp2174A174LGCCTTG22AY.260.000057
ORF1ab/nsp2174A174DgCcgAc22AY.280.003781
ORF1ab/nsp2174A174SGcCTcT12AY.30.00001
ORF1ab/nsp2174A174SGcCTcG12AY.30.00001
ORF1ab/nsp2174A174AgcCgcT22AY.3.10.000171
ORF1ab/nsp2174A174TGccAcc22AY.320.001065
ORF1ab/nsp2174A174VgCcgTc22AY.320.001065
ORF1ab/nsp2174A174AgcCgcT22AY.350.000466
ORF1ab/nsp2174A174delGCC---22AY.350.000466
ORF1ab/nsp2174A174DgCcgAc22AY.40.000003
ORF1ab/nsp2174A174delGCC---22AY.430.000009
ORF1ab/nsp2174A174VgCcgTc22AY.450.000243
ORF1ab/nsp2174A174VgCcgTc22AY.46.40.000329
ORF1ab/nsp2174A174AgcCgcT22AY.470.000062
ORF1ab/nsp2174A174VgCcgTc22AY.540.000191
ORF1ab/nsp2174A174TGccAcc22AY.550.001835
ORF1ab/nsp2174A174AgcCgcT22AY.670.000929
ORF1ab/nsp2174A174TGccAcc22AY.750.000112
ORF1ab/nsp2174A174VgCcgTc22AY.880.001768
ORF1ab/nsp2174A174VgCcgTc22AY.910.001461
ORF1ab/nsp2174A174VgCcgTc22AY.98.10.000097
ORF1ab/nsp2174A174AgcCgcT22AY.98.10.000097
ORF1ab/nsp2174A174delGCC---22B.10.000018
ORF1ab/nsp2174A174VgCcgTc22B.1.1.2160.001781
ORF1ab/nsp2174A174VgCcgTc22B.1.1.3160.00185
ORF1ab/nsp2174A174VgCcgTc22B.1.1.3180.000604
ORF1ab/nsp2174A174AgcCgcT22B.1.1600.000062
ORF1ab/nsp2174A174SGccTcc22B.1.1600.000062
ORF1ab/nsp2174A174AgcCgcT22B.1.1640.029851
ORF1ab/nsp2174A174TGccAcc22B.1.1770.000026
ORF1ab/nsp2174A174VgCcgTc22B.1.2340.000264
ORF1ab/nsp2174A174delGCC---22B.1.2580.000133
ORF1ab/nsp2174A174AgcCgcT22B.1.351.20.000605
ORF1ab/nsp2174A174AgcCgcT22B.1.3690.00057
ORF1ab/nsp2174A174VgCcgTc22B.1.4270.000101
ORF1ab/nsp2174A174SGccTcc22B.1.4290.000047
ORF1ab/nsp2174A174VgCcgTc22B.1.5250.000226
ORF1ab/nsp2174A174VgCcgTc22B.1.5260.000047
ORF1ab/nsp2174A174SGccTcc22B.1.5510.002581
ORF1ab/nsp2174A174AgcCgcT22B.1.6090.000959
ORF1ab/nsp2174A174delGCC---22B.1.617.20.000008
ORF1ab/nsp2174A174AgcCgcT22B.1.6210.000177
ORF1ab/nsp2174A174VgCcgTc22B.1.621.10.001012
ORF1ab/nsp2174A174IGCcATc12B.1.6300.005236
ORF1ab/nsp2174A174VgCCgTT12B.1.6300.005236
ORF1ab/nsp2174A174IGCCATT12B.1.6300.005236
ORF1ab/nsp2174A174TGccAcc12B.1.6300.005236
ORF1ab/nsp2174A174TGcCAcT12B.1.6300.005236
ORF1ab/nsp2174A174VgCcgTc12B.1.6300.005236
ORF1ab/nsp2174A174delGCC---22N.60.014184
ORF1ab/nsp2174A174VgCcgTc22P.1.140.000096
ORF1ab/nsp2174A174VgCcgTc22P.1.20.002312
ORF1ab/nsp2174A174delGCC---22P.20.000373
ORF1ab/nsp2174A174VgCcgTc22Q.80.00033
ORF1ab/nsp2174A174VgCcgTc22R.10.00018
ORF1ab/nsp2174A174PGccCcc11A.2.50.000499
ORF1ab/nsp2174A174TGccAcc11A.2.50.000499
ORF1ab/nsp2174A174VgCcgTc11A.2.50.000499
ORF1ab/nsp2174A174LGCcCTc11A.2.50.000499
ORF1ab/nsp2174A174del2gCCg--11All0
ORF1ab/nsp2174A174NGCcAAc11All0
ORF1ab/nsp2174A174EgCCgAA11All0
ORF1ab/nsp2174A174AgcCgcA11AY.100.00053
ORF1ab/nsp2174A174WGCCTGG11AY.1000.000046
ORF1ab/nsp2174A174IGCcATc11AY.1000.000046
ORF1ab/nsp2174A174LGCCTTG11AY.1000.000046
ORF1ab/nsp2174A174TGccAcc11AY.1000.000046
ORF1ab/nsp2174A174TGccAcc11AY.1010.00049
ORF1ab/nsp2174A174TGccAcc11AY.1030.000006
ORF1ab/nsp2174A174DgCcgAc11AY.1030.000006
ORF1ab/nsp2174A174VgCcgTc11AY.1040.001984
ORF1ab/nsp2174A174AgcCgcT11AY.1100.000113
ORF1ab/nsp2174A174VgCcgTc11AY.1130.000142
ORF1ab/nsp2174A174VgCcgTc11AY.1140.000231
ORF1ab/nsp2174A174VgCcgTc11AY.1170.000085
ORF1ab/nsp2174A174TGccAcc11AY.1170.000085
ORF1ab/nsp2174A174TGccAcc11AY.1200.000037
ORF1ab/nsp2174A174VgCcgTc11AY.130.000161
ORF1ab/nsp2174A174AgcCgcA11AY.160.00038
ORF1ab/nsp2174A174AgcCgcT11AY.16.10.00047
ORF1ab/nsp2174A174VgCcgTc11AY.16.10.00047
ORF1ab/nsp2174A174AgcCgcT11AY.20.000356
ORF1ab/nsp2174A174TGccAcc11AY.200.000039
ORF1ab/nsp2174A174VgCcgTc11AY.200.000039
ORF1ab/nsp2174A174AgcCgcT11AY.240.000431
ORF1ab/nsp2174A174delGCC---11AY.250.000006
ORF1ab/nsp2174A174TGccAcc11AY.260.000028
ORF1ab/nsp2174A174AgcCgcT11AY.270.000065
ORF1ab/nsp2174A174FGCCTTT11AY.30.00001
ORF1ab/nsp2174A174LGCCTTG11AY.30.00001
ORF1ab/nsp2174A174AgcCgcT11AY.300.000396
ORF1ab/nsp2174A174AgcCgcT11AY.330.000067
ORF1ab/nsp2174A174SGccTcc11AY.330.000067
ORF1ab/nsp2174A174VgCcgTc11AY.340.000097
ORF1ab/nsp2174A174TGccAcc11AY.34.10.00051
ORF1ab/nsp2174A174AgcCgcA11AY.360.000148
ORF1ab/nsp2174A174VgCcgTc11AY.370.000316
ORF1ab/nsp2174A174TGccAcc11AY.39.10.00004
ORF1ab/nsp2174A174DgCcgAc11AY.39.10.00004
ORF1ab/nsp2174A174delGCC---11AY.40.000002
ORF1ab/nsp2174A174TGccAcc11AY.4.2.10.000149
ORF1ab/nsp2174A174AgcCgcT11AY.4.40.000409
ORF1ab/nsp2174A174TGcCAcA11AY.400.000964
ORF1ab/nsp2174A174VgCcgTc11AY.420.00004
ORF1ab/nsp2174A174SGccTcc11AY.420.00004
ORF1ab/nsp2174A174DgCcgAc11AY.440.000006
ORF1ab/nsp2174A174FGCcTTc11AY.440.000006
ORF1ab/nsp2174A174LGCCTTG11AY.440.000006
ORF1ab/nsp2174A174SGccTcc11AY.450.000122
ORF1ab/nsp2174A174delGCC---11AY.460.000104
ORF1ab/nsp2174A174AgcCgcT11AY.460.000104
ORF1ab/nsp2174A174TGccAcc11AY.46.40.000165
ORF1ab/nsp2174A174AgcCgcT11AY.46.40.000165
ORF1ab/nsp2174A174AgcCgcT11AY.46.50.000198
ORF1ab/nsp2174A174AgcCgcT11AY.480.000465
ORF1ab/nsp2174A174AgcCgcT11AY.50.000021
ORF1ab/nsp2174A174SGccTcc11AY.50.000021
ORF1ab/nsp2174A174VgCcgTc11AY.5.30.000337
ORF1ab/nsp2174A174VgCcgTc11AY.5.40.000277
ORF1ab/nsp2174A174SGccTcc11AY.560.001605
ORF1ab/nsp2174A174TGccAcc11AY.600.000938
ORF1ab/nsp2174A174VgCcgTc11AY.600.000938
ORF1ab/nsp2174A174AgcCgcT11AY.610.000105
ORF1ab/nsp2174A174AgcCgcT11AY.650.000533
ORF1ab/nsp2174A174VgCcgTc11AY.700.000209
ORF1ab/nsp2174A174TGccAcc11AY.700.000209
ORF1ab/nsp2174A174AgcCgcT11AY.720.001361
ORF1ab/nsp2174A174AgcCgcT11AY.730.000665
ORF1ab/nsp2174A174AgcCgcT11AY.740.000116
ORF1ab/nsp2174A174delGCC---11AY.750.000056
ORF1ab/nsp2174A174delGCC---11AY.75.10.00018
ORF1ab/nsp2174A174AgcCgcT11AY.780.001541
ORF1ab/nsp2174A174VgCcgTc11AY.790.001211
ORF1ab/nsp2174A174VgCcgTc11AY.810.001992
ORF1ab/nsp2174A174AgcCgcT11AY.880.000884
ORF1ab/nsp2174A174VgCcgTc11AY.90.000068
ORF1ab/nsp2174A174AgcCgcA11AY.9.20.000037
ORF1ab/nsp2174A174TGccAcc11AY.930.000273
ORF1ab/nsp2174A174AgcCgcT11AY.930.000273
ORF1ab/nsp2174A174TGccAcc11AY.980.000079
ORF1ab/nsp2174A174AgcCgcA11B0.000128
ORF1ab/nsp2174A174FGCCTTT11B.10.000009
ORF1ab/nsp2174A174del2gCCg--11B.10.000009
ORF1ab/nsp2174A174GgCcgGc11B.10.000009
ORF1ab/nsp2174A174PGccCcc11B.10.000009
ORF1ab/nsp2174A174del1Gcc-cc11B.1.10.000018
ORF1ab/nsp2174A174delGCC---11B.1.10.000018
ORF1ab/nsp2174A174SGccTcc11B.1.10.000018
ORF1ab/nsp2174A174VgCcgTc11B.1.1.1760.000439
ORF1ab/nsp2174A174AgcCgcA11B.1.1.2140.000055
ORF1ab/nsp2174A174TGccAcc11B.1.1.2140.000055
ORF1ab/nsp2174A174AgcCgcT11B.1.1.2550.00303
ORF1ab/nsp2174A174TGccAcc11B.1.1.2770.000759
ORF1ab/nsp2174A174SGccTcc11B.1.1.2940.001266
ORF1ab/nsp2174A174TGccAcc11B.1.1.3060.000438
ORF1ab/nsp2174A174delGCC---11B.1.1.3150.008475
ORF1ab/nsp2174A174AgcCgcT11B.1.1.3170.000412
ORF1ab/nsp2174A174AgcCgcT11B.1.1.3480.000796
ORF1ab/nsp2174A174VgCcgTc11B.1.1.3490.010309
ORF1ab/nsp2174A174AgcCgcT11B.1.1.5250.005464
ORF1ab/nsp2174A174TGccAcc11B.1.1.5260.003546
ORF1ab/nsp2174A174AgcCgcT11B.1.1.610.008772
ORF1ab/nsp2174A174WGCCTGG11B.1.1.70.000001
ORF1ab/nsp2174A174PGccCcc11B.1.1.70.000001
ORF1ab/nsp2174A174CGCCTGT11B.1.1.70.000001
ORF1ab/nsp2174A174VgCcgTc11B.1.110.30.000718
ORF1ab/nsp2174A174delGCC---11B.1.1400.018868
ORF1ab/nsp2174A174SGccTcc11B.1.1670.007812
ORF1ab/nsp2174A174DgCcgAc11B.1.1770.000013
ORF1ab/nsp2174A174VgCcgTc11B.1.1770.000013
ORF1ab/nsp2174A174VgCcgTc11B.1.177.110.001698
ORF1ab/nsp2174A174VgCcgTc11B.1.177.170.000821
ORF1ab/nsp2174A174DgCcgAc11B.1.177.350.000691
ORF1ab/nsp2174A174VgCcgTc11B.1.177.40.000211
ORF1ab/nsp2174A174VgCcgTc11B.1.177.580.001332
ORF1ab/nsp2174A174AgcCgcT11B.1.177.750.001041
ORF1ab/nsp2174A174VgCcgTc11B.1.177.860.000183
ORF1ab/nsp2174A174SGccTcc11B.1.20.000009
ORF1ab/nsp2174A174del1Gcc-cc11B.1.20.000009
ORF1ab/nsp2174A174VgCcgTc11B.1.214.30.007143
ORF1ab/nsp2174A174DgCcgAc11B.1.2210.000071
ORF1ab/nsp2174A174VgCcgTc11B.1.221.40.004167
ORF1ab/nsp2174A174delGCC---11B.1.2420.018868
ORF1ab/nsp2174A174AgcCgcT11B.1.2430.00007
ORF1ab/nsp2174A174AgcCgcT11B.1.2580.000067
ORF1ab/nsp2174A174NGCcAAc11B.1.258.110.000396
ORF1ab/nsp2174A174DgCcgAc11B.1.258.110.000396
ORF1ab/nsp2174A174TGccAcc11B.1.258.110.000396
ORF1ab/nsp2174A174TGccAcc11B.1.258.170.000104
ORF1ab/nsp2174A174VgCcgTc11B.1.3110.000275
ORF1ab/nsp2174A174AgcCgcA11B.1.3460.001311
ORF1ab/nsp2174A174AgcCgcT11B.1.3510.00003
ORF1ab/nsp2174A174VgCcgTc11B.1.3510.00003
ORF1ab/nsp2174A174AgcCgcT11B.1.360.000146
ORF1ab/nsp2174A174GgCcgGc11B.1.3690.000285
ORF1ab/nsp2174A174SGccTcc11B.1.3960.000706
ORF1ab/nsp2174A174VgCcgTc11B.1.4160.001269
ORF1ab/nsp2174A174AgcCgcT11B.1.4200.010417
ORF1ab/nsp2174A174VgCcgTc11B.1.4200.010417
ORF1ab/nsp2174A174TGccAcc11B.1.4270.00005
ORF1ab/nsp2174A174delGCC---11B.1.4290.000024
ORF1ab/nsp2174A174EgCCgAA11B.1.4620.007246
ORF1ab/nsp2174A174AgcCgcT11B.1.466.20.000391
ORF1ab/nsp2174A174VgCcgTc11B.1.4690.00361
ORF1ab/nsp2174A174DgCcgAc11B.1.5260.000024
ORF1ab/nsp2174A174TGccAcc11B.1.5510.00129
ORF1ab/nsp2174A174AgcCgcT11B.1.5760.000907
ORF1ab/nsp2174A174VgCcgTc11B.1.5880.00091
ORF1ab/nsp2174A174AgcCgcT11B.1.5960.000087
ORF1ab/nsp2174A174SGccTcc11B.1.5960.000087
ORF1ab/nsp2174A174VgCcgTc11B.1.5960.000087
ORF1ab/nsp2174A174VgCcgTc11B.1.617.10.000129
ORF1ab/nsp2174A174AgcCgcT11B.1.617.10.000129
ORF1ab/nsp2174A174delGCC---11B.1.6210.000089
ORF1ab/nsp2174A174AgcCgcT11B.1.6280.000352
ORF1ab/nsp2174A174AgcCgcT11B.1.6300.005236
ORF1ab/nsp2174A174AgcCgcT11B.1.6330.041667
ORF1ab/nsp2174A174VgCcgTc11B.280.003279
ORF1ab/nsp2174A174delGCC---11C.360.000911
ORF1ab/nsp2174A174VgCcgTc11C.36.30.000567
ORF1ab/nsp2174A174FGCcTTc11P.10.000016
ORF1ab/nsp2174A174LGCCTTG11P.10.000016
ORF1ab/nsp2174A174AgcCgcT11P.1.10.000318
ORF1ab/nsp2174A174AgcCgcT11P.1.120.000484
ORF1ab/nsp2174A174VgCcgTc11P.1.160.000374
ORF1ab/nsp2174A174VgCcgTc11P.1.170.000162
ORF1ab/nsp2174A174AgcCgcT11P.1.170.000162
ORF1ab/nsp2174A174VgCcgTc11P.1.40.000977
ORF1ab/nsp2174A174VgCcgTc11P.20.000187
ORF1ab/nsp2174A174VgCcgTc11Q.10.000126
ORF1ab/nsp2174A174delGCC---11Q.20.000613
ORF1ab/nsp2174A174SGccTcc11Q.80.000165
ORF1ab/nsp2174A174AgcCgcT11R.10.00009