CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 172 | E172D | E352D | nonsyn | gaA | gaC | 3951 | 3931 | 0.994938 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172D | E352D | nonsyn | gaA | gaT | 3951 | 20 | 0.00506201 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172K | E352K | nonsyn | Gaa | Aaa | 383 | 378 | 0.986945 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172K | E352K | nonsyn | GaA | AaG | 383 | 5 | 0.0130548 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172G | E352G | nonsyn | gAa | gGa | 179 | 170 | 0.949721 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172G | E352G | nonsyn | gAA | gGG | 179 | 6 | 0.0335196 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172G | E352G | nonsyn | gAA | gGT | 179 | 3 | 0.0167598 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172X | E352X | nonsyn | Gaa | Taa | 147 | 131 | 0.891156 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172X | E352X | nonsyn | GAa | TGa | 147 | 11 | 0.0748299 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172X | E352X | nonsyn | GaA | TaG | 147 | 5 | 0.0340136 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172E | E352E | syn | gaA | gaG | 121 | 121 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172A | E352A | nonsyn | gAa | gCa | 107 | 107 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172del | E352del | del | GAA | --- | 44 | 44 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172V | E352V | nonsyn | gAa | gTa | 39 | 31 | 0.794872 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172V | E352V | nonsyn | gAA | gTT | 39 | 4 | 0.102564 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172V | E352V | nonsyn | gAA | gTG | 39 | 3 | 0.0769231 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172V | E352V | nonsyn | gAA | gTC | 39 | 1 | 0.025641 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAa | TTa | 27 | 16 | 0.592593 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAa | CTa | 27 | 5 | 0.185185 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAA | TTG | 27 | 3 | 0.111111 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAA | CTG | 27 | 1 | 0.037037 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAA | CTT | 27 | 1 | 0.037037 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172L | E352L | nonsyn | GAA | CTC | 27 | 1 | 0.037037 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172Q | E352Q | nonsyn | Gaa | Caa | 22 | 21 | 0.954545 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172Q | E352Q | nonsyn | GaA | CaG | 22 | 1 | 0.0454545 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172R | E352R | nonsyn | GAa | AGa | 17 | 11 | 0.647059 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172R | E352R | nonsyn | GAA | AGG | 17 | 3 | 0.176471 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172R | E352R | nonsyn | GAa | CGa | 17 | 2 | 0.117647 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172R | E352R | nonsyn | GAA | CGT | 17 | 1 | 0.0588235 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172I | E352I | nonsyn | GAa | ATa | 6 | 5 | 0.833333 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172I | E352I | nonsyn | GAA | ATT | 6 | 1 | 0.166667 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172Y | E352Y | nonsyn | GaA | TaT | 5 | 4 | 0.8 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172S | E352S | nonsyn | GAa | TCa | 5 | 4 | 0.8 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172del1 | E352del1 | del | gAa | g-a | 5 | 2 | 0.4 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172del1 | E352del1 | del | Gaa | -aa | 5 | 1 | 0.2 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172del1 | E352del1 | del | gaA | ga- | 5 | 1 | 0.2 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172del1 | E352del1 | del | GaA | -aG | 5 | 1 | 0.2 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172S | E352S | nonsyn | GAA | AGT | 5 | 1 | 0.2 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172Y | E352Y | nonsyn | GaA | TaC | 5 | 1 | 0.2 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172T | E352T | nonsyn | GAa | ACa | 4 | 4 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172C | E352C | nonsyn | GAA | TGT | 4 | 3 | 0.75 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172F | E352F | nonsyn | GAA | TTT | 4 | 3 | 0.75 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172F | E352F | nonsyn | GAA | TTC | 4 | 1 | 0.25 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172C | E352C | nonsyn | GAA | TGC | 4 | 1 | 0.25 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172H | E352H | nonsyn | GaA | CaT | 2 | 1 | 0.5 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172H | E352H | nonsyn | GaA | CaC | 2 | 1 | 0.5 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172P | E352P | nonsyn | GAa | CCa | 1 | 1 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172M | E352M | nonsyn | GAA | ATG | 1 | 1 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172N | E352N | nonsyn | GaA | AaT | 1 | 1 | 1 | 1319-1321 |
ORF1ab/nsp2 | 172 | E172W | E352W | nonsyn | GAA | TGG | 1 | 1 | 1 | 1319-1321 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 3931 | 3951 | All | 0.000752 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 20 | 3951 | All | 0.000004 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1889 | 1889 | AY.4 | 0.00294 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1882 | 1882 | B.1.1.176 | 0.826889 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 378 | 383 | All | 0.000072 |
ORF1ab/nsp2 | 172 | E172K | GaA | AaG | 5 | 383 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 170 | 179 | All | 0.000033 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 6 | 179 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGT | 3 | 179 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 131 | 147 | All | 0.000025 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 11 | 147 | All | 0.000002 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 5 | 147 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 121 | 121 | All | 0.000023 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 107 | 107 | All | 0.00002 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 104 | 106 | AY.25 | 0.000626 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 2 | 106 | AY.25 | 0.000012 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 104 | 104 | B.1.110 | 0.470588 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 49 | 49 | B.1.1.7 | 0.000044 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 44 | 44 | All | 0.000008 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 41 | 43 | B.1.1.7 | 0.000037 |
ORF1ab/nsp2 | 172 | E172K | GaA | AaG | 2 | 43 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 41 | 41 | B.1.617.2 | 0.000154 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 31 | 39 | All | 0.000006 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTT | 4 | 39 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTG | 3 | 39 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTC | 1 | 39 | All | 0 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 38 | 38 | B | 0.004857 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 33 | 33 | AY.4 | 0.000051 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 33 | 33 | B.1.617.2 | 0.000124 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 30 | 30 | AY.44 | 0.000183 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 30 | 30 | B.1.1.7 | 0.000027 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 29 | 29 | B.1.1.318 | 0.008751 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 16 | 27 | All | 0.000003 |
ORF1ab/nsp2 | 172 | E172L | GAa | CTa | 5 | 27 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172L | GAA | TTG | 3 | 27 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTC | 1 | 27 | All | 0 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTG | 1 | 27 | All | 0 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTT | 1 | 27 | All | 0 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 23 | 23 | AY.4.5 | 0.002472 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 21 | 22 | All | 0.000004 |
ORF1ab/nsp2 | 172 | E172Q | GaA | CaG | 1 | 22 | All | 0 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 21 | 21 | AY.46.6 | 0.001516 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 20 | 20 | AY.4 | 0.000031 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 19 | 20 | B.1.1 | 0.000345 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 20 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 11 | 17 | All | 0.000002 |
ORF1ab/nsp2 | 172 | E172R | GAA | AGG | 3 | 17 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172R | GAa | CGa | 2 | 17 | All | 0 |
ORF1ab/nsp2 | 172 | E172R | GAA | CGT | 1 | 17 | All | 0 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 13 | 17 | B.1 | 0.000119 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 3 | 17 | B.1 | 0.000027 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 1 | 17 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 14 | 14 | AY.39 | 0.000346 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 12 | 13 | B.1 | 0.00011 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGT | 1 | 13 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 12 | 12 | AY.25 | 0.000072 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 12 | 12 | B.1.210 | 0.025586 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 7 | 10 | B.1.1 | 0.000127 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 2 | 10 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 1 | 10 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 9 | 10 | B.1.1.7 | 0.000008 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 1 | 10 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 10 | 10 | B.1.110.1 | 1 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 9 | 9 | AY.35 | 0.002097 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 6 | 9 | B.1 | 0.000055 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 5 | 9 | B.1 | 0.000046 |
ORF1ab/nsp2 | 172 | E172L | GAa | CTa | 2 | 9 | B.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTT | 2 | 9 | B.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTG | 1 | 9 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172L | GAA | TTG | 1 | 9 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTG | 1 | 9 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 8 | 9 | B.1.1 | 0.000145 |
ORF1ab/nsp2 | 172 | E172K | GaA | AaG | 1 | 9 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 9 | 9 | B.1.617.2 | 0.000034 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 8 | 8 | B.1.258 | 0.000532 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 7 | 7 | AS.1 | 0.066667 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp2 | 172 | E172L | GAa | CTa | 3 | 7 | B.1.177 | 0.00004 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 2 | 7 | B.1.177 | 0.000026 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTT | 1 | 7 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172L | GAA | CTC | 1 | 7 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 7 | 7 | B.1.177.21 | 0.000535 |
ORF1ab/nsp2 | 172 | E172I | GAa | ATa | 5 | 6 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172I | GAA | ATT | 1 | 6 | All | 0 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 6 | 6 | AY.46.6 | 0.000433 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 4 | 6 | B.1.1 | 0.000073 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 4 | 6 | B.1.1 | 0.000073 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTG | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGT | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTT | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 5 | 6 | B.1.1.7 | 0.000004 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 6 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 6 | 6 | B.1.177 | 0.000079 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 6 | 6 | D.2 | 0.00045 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaT | 4 | 5 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172S | GAa | TCa | 4 | 5 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172del1 | gAa | g-a | 2 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172del1 | GaA | -aG | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172S | GAA | AGT | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172del1 | gaA | ga- | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172del1 | Gaa | -aa | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaC | 1 | 5 | All | 0 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 5 | 5 | AY.9 | 0.000338 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 4 | 5 | B.1 | 0.000037 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 3 | 5 | B.1 | 0.000027 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 2 | 5 | B.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172Q | GaA | CaG | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 4 | 5 | B.1.1 | 0.000073 |
ORF1ab/nsp2 | 172 | E172L | GAA | TTG | 1 | 5 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 5 | 5 | B.1.1.33 | 0.002104 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 4 | 5 | B.1.177 | 0.000053 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 4 | 5 | B.1.177 | 0.000053 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 3 | 5 | B.1.177 | 0.00004 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTC | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTT | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGT | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp2 | 172 | E172T | GAa | ACa | 4 | 4 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTT | 3 | 4 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGT | 3 | 4 | All | 0.000001 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGC | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTC | 1 | 4 | All | 0 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 3 | 4 | AY.25 | 0.000018 |
ORF1ab/nsp2 | 172 | E172K | GaA | AaG | 1 | 4 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 4 | 4 | AY.8 | 0.002424 |
ORF1ab/nsp2 | 172 | E172S | GAa | TCa | 3 | 4 | B.1 | 0.000027 |
ORF1ab/nsp2 | 172 | E172S | GAA | AGT | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 3 | AY.103 | 0.000012 |
ORF1ab/nsp2 | 172 | E172K | GaA | AaG | 1 | 3 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 2 | 3 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 1 | 3 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 3 | 3 | AY.46.1 | 0.00308 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 2 | 3 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 172 | E172R | GAA | AGG | 1 | 3 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 2 | 3 | B.1.160 | 0.000062 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 3 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 3 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172R | GAA | CGT | 1 | 3 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172R | GAa | CGa | 1 | 3 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 3 | 3 | B.1.351.3 | 0.002629 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp2 | 172 | E172H | GaA | CaT | 1 | 2 | All | 0 |
ORF1ab/nsp2 | 172 | E172H | GaA | CaC | 1 | 2 | All | 0 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 1 | 2 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 2 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 2 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 2 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 172 | E172R | GAA | AGG | 1 | 2 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp2 | 172 | E172G | gAA | gGG | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 2 | 2 | AY.58 | 0.001815 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp2 | 172 | E172T | GAa | ACa | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172I | GAA | ATT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172I | GAa | ATa | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGC | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 172 | E172I | GAa | ATa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 1 | 2 | B.1.1.170 | 0.001247 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.1.170 | 0.001247 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 2 | 2 | B.1.1.207 | 0.002364 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 2 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp2 | 172 | E172R | GAA | AGG | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTC | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172H | GaA | CaT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTT | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaC | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172H | GaA | CaC | 1 | 2 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 2 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 172 | E172X | GAa | TGa | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp2 | 172 | E172L | GAA | TTG | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172X | GaA | TaG | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172V | gAA | gTG | 1 | 2 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 2 | B.39 | 0.004662 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 2 | 2 | P.1.1 | 0.000635 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 172 | E172M | GAA | ATG | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 172 | E172P | GAa | CCa | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 172 | E172W | GAA | TGG | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 172 | E172N | GaA | AaT | 1 | 1 | All | 0 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 172 | E172del1 | gAa | g-a | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B | 0.000128 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172N | GaA | AaT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp2 | 172 | E172M | GAA | ATG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172W | GAA | TGG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172F | GAA | TTT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172T | GAa | ACa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172Y | GaA | TaT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172S | GAa | TCa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.1.269 | 0.001353 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp2 | 172 | E172I | GAa | ATa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.385 | 0.004464 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.1.385 | 0.004464 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172del1 | GaA | -aG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp2 | 172 | E172del1 | gAa | g-a | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp2 | 172 | E172T | GAa | ACa | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172P | GAa | CCa | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172C | GAA | TGT | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172I | GAa | ATa | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp2 | 172 | E172del1 | Gaa | -aa | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172R | GAa | CGa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 1 | B.1.240.1 | 0.025 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.252 | 0.006623 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 172 | E172R | GAa | AGa | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 172 | E172del1 | gaA | ga- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp2 | 172 | E172E | gaA | gaG | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp2 | 172 | E172G | gAa | gGa | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp2 | 172 | E172A | gAa | gCa | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp2 | 172 | E172Q | Gaa | Caa | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp2 | 172 | E172L | GAa | TTa | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp2 | 172 | E172X | Gaa | Taa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp2 | 172 | E172K | Gaa | Aaa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp2 | 172 | E172V | gAa | gTa | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp2 | 172 | E172D | gaA | gaC | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 172 | E172del | GAA | --- | 1 | 1 | Q.2 | 0.000613 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|