CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 172

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2172E172DE352DnonsyngaAgaC395139310.9949381319-1321
ORF1ab/nsp2172E172DE352DnonsyngaAgaT3951200.005062011319-1321
ORF1ab/nsp2172E172KE352KnonsynGaaAaa3833780.9869451319-1321
ORF1ab/nsp2172E172KE352KnonsynGaAAaG38350.01305481319-1321
ORF1ab/nsp2172E172GE352GnonsyngAagGa1791700.9497211319-1321
ORF1ab/nsp2172E172GE352GnonsyngAAgGG17960.03351961319-1321
ORF1ab/nsp2172E172GE352GnonsyngAAgGT17930.01675981319-1321
ORF1ab/nsp2172E172XE352XnonsynGaaTaa1471310.8911561319-1321
ORF1ab/nsp2172E172XE352XnonsynGAaTGa147110.07482991319-1321
ORF1ab/nsp2172E172XE352XnonsynGaATaG14750.03401361319-1321
ORF1ab/nsp2172E172EE352EsyngaAgaG12112111319-1321
ORF1ab/nsp2172E172AE352AnonsyngAagCa10710711319-1321
ORF1ab/nsp2172E172delE352deldelGAA---444411319-1321
ORF1ab/nsp2172E172VE352VnonsyngAagTa39310.7948721319-1321
ORF1ab/nsp2172E172VE352VnonsyngAAgTT3940.1025641319-1321
ORF1ab/nsp2172E172VE352VnonsyngAAgTG3930.07692311319-1321
ORF1ab/nsp2172E172VE352VnonsyngAAgTC3910.0256411319-1321
ORF1ab/nsp2172E172LE352LnonsynGAaTTa27160.5925931319-1321
ORF1ab/nsp2172E172LE352LnonsynGAaCTa2750.1851851319-1321
ORF1ab/nsp2172E172LE352LnonsynGAATTG2730.1111111319-1321
ORF1ab/nsp2172E172LE352LnonsynGAACTG2710.0370371319-1321
ORF1ab/nsp2172E172LE352LnonsynGAACTT2710.0370371319-1321
ORF1ab/nsp2172E172LE352LnonsynGAACTC2710.0370371319-1321
ORF1ab/nsp2172E172QE352QnonsynGaaCaa22210.9545451319-1321
ORF1ab/nsp2172E172QE352QnonsynGaACaG2210.04545451319-1321
ORF1ab/nsp2172E172RE352RnonsynGAaAGa17110.6470591319-1321
ORF1ab/nsp2172E172RE352RnonsynGAAAGG1730.1764711319-1321
ORF1ab/nsp2172E172RE352RnonsynGAaCGa1720.1176471319-1321
ORF1ab/nsp2172E172RE352RnonsynGAACGT1710.05882351319-1321
ORF1ab/nsp2172E172IE352InonsynGAaATa650.8333331319-1321
ORF1ab/nsp2172E172IE352InonsynGAAATT610.1666671319-1321
ORF1ab/nsp2172E172YE352YnonsynGaATaT540.81319-1321
ORF1ab/nsp2172E172SE352SnonsynGAaTCa540.81319-1321
ORF1ab/nsp2172E172del1E352del1delgAag-a520.41319-1321
ORF1ab/nsp2172E172del1E352del1delGaa-aa510.21319-1321
ORF1ab/nsp2172E172del1E352del1delgaAga-510.21319-1321
ORF1ab/nsp2172E172del1E352del1delGaA-aG510.21319-1321
ORF1ab/nsp2172E172SE352SnonsynGAAAGT510.21319-1321
ORF1ab/nsp2172E172YE352YnonsynGaATaC510.21319-1321
ORF1ab/nsp2172E172TE352TnonsynGAaACa4411319-1321
ORF1ab/nsp2172E172CE352CnonsynGAATGT430.751319-1321
ORF1ab/nsp2172E172FE352FnonsynGAATTT430.751319-1321
ORF1ab/nsp2172E172FE352FnonsynGAATTC410.251319-1321
ORF1ab/nsp2172E172CE352CnonsynGAATGC410.251319-1321
ORF1ab/nsp2172E172HE352HnonsynGaACaT210.51319-1321
ORF1ab/nsp2172E172HE352HnonsynGaACaC210.51319-1321
ORF1ab/nsp2172E172PE352PnonsynGAaCCa1111319-1321
ORF1ab/nsp2172E172ME352MnonsynGAAATG1111319-1321
ORF1ab/nsp2172E172NE352NnonsynGaAAaT1111319-1321
ORF1ab/nsp2172E172WE352WnonsynGAATGG1111319-1321

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2172E172DgaAgaC39313951All0.000752
ORF1ab/nsp2172E172DgaAgaT203951All0.000004
ORF1ab/nsp2172E172DgaAgaC18891889AY.40.00294
ORF1ab/nsp2172E172DgaAgaC18821882B.1.1.1760.826889
ORF1ab/nsp2172E172KGaaAaa378383All0.000072
ORF1ab/nsp2172E172KGaAAaG5383All0.000001
ORF1ab/nsp2172E172GgAagGa170179All0.000033
ORF1ab/nsp2172E172GgAAgGG6179All0.000001
ORF1ab/nsp2172E172GgAAgGT3179All0.000001
ORF1ab/nsp2172E172XGaaTaa131147All0.000025
ORF1ab/nsp2172E172XGAaTGa11147All0.000002
ORF1ab/nsp2172E172XGaATaG5147All0.000001
ORF1ab/nsp2172E172EgaAgaG121121All0.000023
ORF1ab/nsp2172E172AgAagCa107107All0.00002
ORF1ab/nsp2172E172GgAagGa104106AY.250.000626
ORF1ab/nsp2172E172GgAAgGG2106AY.250.000012
ORF1ab/nsp2172E172KGaaAaa104104B.1.1100.470588
ORF1ab/nsp2172E172EgaAgaG4949B.1.1.70.000044
ORF1ab/nsp2172E172delGAA---4444All0.000008
ORF1ab/nsp2172E172KGaaAaa4143B.1.1.70.000037
ORF1ab/nsp2172E172KGaAAaG243B.1.1.70.000002
ORF1ab/nsp2172E172AgAagCa4141B.1.617.20.000154
ORF1ab/nsp2172E172VgAagTa3139All0.000006
ORF1ab/nsp2172E172VgAAgTT439All0.000001
ORF1ab/nsp2172E172VgAAgTG339All0.000001
ORF1ab/nsp2172E172VgAAgTC139All0
ORF1ab/nsp2172E172DgaAgaC3838B0.004857
ORF1ab/nsp2172E172XGaaTaa3333AY.40.000051
ORF1ab/nsp2172E172DgaAgaC3333B.1.617.20.000124
ORF1ab/nsp2172E172KGaaAaa3030AY.440.000183
ORF1ab/nsp2172E172AgAagCa3030B.1.1.70.000027
ORF1ab/nsp2172E172KGaaAaa2929B.1.1.3180.008751
ORF1ab/nsp2172E172LGAaTTa1627All0.000003
ORF1ab/nsp2172E172LGAaCTa527All0.000001
ORF1ab/nsp2172E172LGAATTG327All0.000001
ORF1ab/nsp2172E172LGAACTC127All0
ORF1ab/nsp2172E172LGAACTG127All0
ORF1ab/nsp2172E172LGAACTT127All0
ORF1ab/nsp2172E172XGaaTaa2323AY.4.50.002472
ORF1ab/nsp2172E172QGaaCaa2122All0.000004
ORF1ab/nsp2172E172QGaACaG122All0
ORF1ab/nsp2172E172KGaaAaa2121AY.46.60.001516
ORF1ab/nsp2172E172KGaaAaa2020AY.40.000031
ORF1ab/nsp2172E172DgaAgaC1920B.1.10.000345
ORF1ab/nsp2172E172DgaAgaT120B.1.10.000018
ORF1ab/nsp2172E172KGaaAaa1818AY.30.000179
ORF1ab/nsp2172E172RGAaAGa1117All0.000002
ORF1ab/nsp2172E172RGAAAGG317All0.000001
ORF1ab/nsp2172E172RGAaCGa217All0
ORF1ab/nsp2172E172RGAACGT117All0
ORF1ab/nsp2172E172XGaaTaa1317B.10.000119
ORF1ab/nsp2172E172XGAaTGa317B.10.000027
ORF1ab/nsp2172E172XGaATaG117B.10.000009
ORF1ab/nsp2172E172DgaAgaC1414AY.390.000346
ORF1ab/nsp2172E172GgAagGa1213B.10.00011
ORF1ab/nsp2172E172GgAAgGT113B.10.000009
ORF1ab/nsp2172E172EgaAgaG1212AY.250.000072
ORF1ab/nsp2172E172KGaaAaa1212B.1.2100.025586
ORF1ab/nsp2172E172XGaaTaa710B.1.10.000127
ORF1ab/nsp2172E172XGAaTGa210B.1.10.000036
ORF1ab/nsp2172E172XGaATaG110B.1.10.000018
ORF1ab/nsp2172E172GgAagGa910B.1.1.70.000008
ORF1ab/nsp2172E172GgAAgGG110B.1.1.70.000001
ORF1ab/nsp2172E172KGaaAaa1010B.1.110.11
ORF1ab/nsp2172E172DgaAgaC99AY.350.002097
ORF1ab/nsp2172E172VgAagTa69B.10.000055
ORF1ab/nsp2172E172LGAaTTa59B.10.000046
ORF1ab/nsp2172E172LGAaCTa29B.10.000018
ORF1ab/nsp2172E172VgAAgTT29B.10.000018
ORF1ab/nsp2172E172LGAACTG19B.10.000009
ORF1ab/nsp2172E172LGAATTG19B.10.000009
ORF1ab/nsp2172E172VgAAgTG19B.10.000009
ORF1ab/nsp2172E172KGaaAaa89B.1.10.000145
ORF1ab/nsp2172E172KGaAAaG19B.1.10.000018
ORF1ab/nsp2172E172KGaaAaa99B.1.617.20.000034
ORF1ab/nsp2172E172KGaaAaa88B.1.2580.000532
ORF1ab/nsp2172E172DgaAgaC77AS.10.066667
ORF1ab/nsp2172E172KGaaAaa77B.10.000064
ORF1ab/nsp2172E172EgaAgaG77B.10.000064
ORF1ab/nsp2172E172LGAaCTa37B.1.1770.00004
ORF1ab/nsp2172E172LGAaTTa27B.1.1770.000026
ORF1ab/nsp2172E172LGAACTT17B.1.1770.000013
ORF1ab/nsp2172E172LGAACTC17B.1.1770.000013
ORF1ab/nsp2172E172KGaaAaa77B.1.177.210.000535
ORF1ab/nsp2172E172IGAaATa56All0.000001
ORF1ab/nsp2172E172IGAAATT16All0
ORF1ab/nsp2172E172AgAagCa66AY.3.10.000512
ORF1ab/nsp2172E172AgAagCa66AY.440.000037
ORF1ab/nsp2172E172EgaAgaG66AY.46.60.000433
ORF1ab/nsp2172E172AgAagCa66B.10.000055
ORF1ab/nsp2172E172VgAagTa46B.1.10.000073
ORF1ab/nsp2172E172GgAagGa46B.1.10.000073
ORF1ab/nsp2172E172VgAAgTG16B.1.10.000018
ORF1ab/nsp2172E172GgAAgGT16B.1.10.000018
ORF1ab/nsp2172E172VgAAgTT16B.1.10.000018
ORF1ab/nsp2172E172GgAAgGG16B.1.10.000018
ORF1ab/nsp2172E172delGAA---66B.1.1.70.000005
ORF1ab/nsp2172E172DgaAgaT56B.1.1.70.000004
ORF1ab/nsp2172E172DgaAgaC16B.1.1.70.000001
ORF1ab/nsp2172E172KGaaAaa66B.1.1770.000079
ORF1ab/nsp2172E172EgaAgaG66B.1.20.000053
ORF1ab/nsp2172E172XGaaTaa66D.20.00045
ORF1ab/nsp2172E172YGaATaT45All0.000001
ORF1ab/nsp2172E172SGAaTCa45All0.000001
ORF1ab/nsp2172E172del1gAag-a25All0
ORF1ab/nsp2172E172del1GaA-aG15All0
ORF1ab/nsp2172E172SGAAAGT15All0
ORF1ab/nsp2172E172del1gaAga-15All0
ORF1ab/nsp2172E172del1Gaa-aa15All0
ORF1ab/nsp2172E172YGaATaC15All0
ORF1ab/nsp2172E172XGaaTaa55AY.90.000338
ORF1ab/nsp2172E172QGaaCaa45B.10.000037
ORF1ab/nsp2172E172DgaAgaC35B.10.000027
ORF1ab/nsp2172E172DgaAgaT25B.10.000018
ORF1ab/nsp2172E172QGaACaG15B.10.000009
ORF1ab/nsp2172E172LGAaTTa45B.1.10.000073
ORF1ab/nsp2172E172LGAATTG15B.1.10.000018
ORF1ab/nsp2172E172delGAA---55B.1.1.330.002104
ORF1ab/nsp2172E172GgAagGa45B.1.1770.000053
ORF1ab/nsp2172E172XGaaTaa45B.1.1770.000053
ORF1ab/nsp2172E172VgAagTa35B.1.1770.00004
ORF1ab/nsp2172E172XGAaTGa15B.1.1770.000013
ORF1ab/nsp2172E172VgAAgTC15B.1.1770.000013
ORF1ab/nsp2172E172VgAAgTT15B.1.1770.000013
ORF1ab/nsp2172E172GgAAgGT15B.1.1770.000013
ORF1ab/nsp2172E172GgAagGa55B.1.5960.000436
ORF1ab/nsp2172E172TGAaACa44All0.000001
ORF1ab/nsp2172E172FGAATTT34All0.000001
ORF1ab/nsp2172E172CGAATGT34All0.000001
ORF1ab/nsp2172E172CGAATGC14All0
ORF1ab/nsp2172E172FGAATTC14All0
ORF1ab/nsp2172E172KGaaAaa34AY.250.000018
ORF1ab/nsp2172E172KGaAAaG14AY.250.000006
ORF1ab/nsp2172E172DgaAgaC44AY.430.000018
ORF1ab/nsp2172E172XGaaTaa44AY.80.002424
ORF1ab/nsp2172E172SGAaTCa34B.10.000027
ORF1ab/nsp2172E172SGAAAGT14B.10.000009
ORF1ab/nsp2172E172XGaaTaa44B.1.1.70.000004
ORF1ab/nsp2172E172EgaAgaG44B.1.5250.000453
ORF1ab/nsp2172E172EgaAgaG33AY.1030.000019
ORF1ab/nsp2172E172KGaaAaa23AY.1030.000012
ORF1ab/nsp2172E172KGaAAaG13AY.1030.000006
ORF1ab/nsp2172E172XGaaTaa23AY.1200.000074
ORF1ab/nsp2172E172XGaATaG13AY.1200.000037
ORF1ab/nsp2172E172KGaaAaa33AY.430.000013
ORF1ab/nsp2172E172VgAagTa33AY.46.10.00308
ORF1ab/nsp2172E172EgaAgaG33B.1.10.000054
ORF1ab/nsp2172E172RGAaAGa23B.1.10.000036
ORF1ab/nsp2172E172RGAAAGG13B.1.10.000018
ORF1ab/nsp2172E172delGAA---33B.1.1.3480.002389
ORF1ab/nsp2172E172XGaaTaa23B.1.1600.000062
ORF1ab/nsp2172E172XGAaTGa13B.1.1600.000031
ORF1ab/nsp2172E172QGaaCaa33B.1.1770.00004
ORF1ab/nsp2172E172RGAaAGa13B.1.1770.000013
ORF1ab/nsp2172E172RGAACGT13B.1.1770.000013
ORF1ab/nsp2172E172RGAaCGa13B.1.1770.000013
ORF1ab/nsp2172E172GgAagGa33B.1.20.000026
ORF1ab/nsp2172E172EgaAgaG33B.1.2340.000396
ORF1ab/nsp2172E172DgaAgaT33B.1.351.30.002629
ORF1ab/nsp2172E172KGaaAaa33B.1.5240.004219
ORF1ab/nsp2172E172EgaAgaG33B.1.5640.001278
ORF1ab/nsp2172E172AgAagCa33C.370.000348
ORF1ab/nsp2172E172EgaAgaG33P.10.000047
ORF1ab/nsp2172E172HGaACaT12All0
ORF1ab/nsp2172E172HGaACaC12All0
ORF1ab/nsp2172E172GgAAgGG12AY.1000.000046
ORF1ab/nsp2172E172GgAagGa12AY.1000.000046
ORF1ab/nsp2172E172AgAagCa22AY.1030.000012
ORF1ab/nsp2172E172DgaAgaC22AY.1030.000012
ORF1ab/nsp2172E172KGaaAaa22AY.1200.000074
ORF1ab/nsp2172E172DgaAgaT12AY.200.000039
ORF1ab/nsp2172E172DgaAgaC12AY.200.000039
ORF1ab/nsp2172E172RGAaAGa12AY.250.000006
ORF1ab/nsp2172E172RGAAAGG12AY.250.000006
ORF1ab/nsp2172E172EgaAgaG22AY.260.000057
ORF1ab/nsp2172E172DgaAgaC22AY.270.000129
ORF1ab/nsp2172E172delGAA---22AY.350.000466
ORF1ab/nsp2172E172GgAagGa22AY.40.000003
ORF1ab/nsp2172E172EgaAgaG22AY.40.000003
ORF1ab/nsp2172E172VgAagTa22AY.4.20.000043
ORF1ab/nsp2172E172DgaAgaC22AY.440.000012
ORF1ab/nsp2172E172GgAAgGG12AY.440.000006
ORF1ab/nsp2172E172GgAagGa12AY.440.000006
ORF1ab/nsp2172E172DgaAgaC22AY.50.000041
ORF1ab/nsp2172E172XGaaTaa22AY.580.001815
ORF1ab/nsp2172E172DgaAgaC22AY.610.00021
ORF1ab/nsp2172E172DgaAgaC22AY.870.001665
ORF1ab/nsp2172E172AgAagCa22AY.980.000158
ORF1ab/nsp2172E172TGAaACa22B.10.000018
ORF1ab/nsp2172E172delGAA---22B.10.000018
ORF1ab/nsp2172E172CGAATGT12B.10.000009
ORF1ab/nsp2172E172IGAAATT12B.10.000009
ORF1ab/nsp2172E172IGAaATa12B.10.000009
ORF1ab/nsp2172E172CGAATGC12B.10.000009
ORF1ab/nsp2172E172delGAA---22B.1.10.000036
ORF1ab/nsp2172E172IGAaATa22B.1.10.000036
ORF1ab/nsp2172E172XGaATaG12B.1.1.1700.001247
ORF1ab/nsp2172E172XGaaTaa12B.1.1.1700.001247
ORF1ab/nsp2172E172GgAagGa22B.1.1.2070.002364
ORF1ab/nsp2172E172XGAaTGa12B.1.1.2770.000759
ORF1ab/nsp2172E172XGaaTaa12B.1.1.2770.000759
ORF1ab/nsp2172E172GgAagGa22B.1.1.5190.000079
ORF1ab/nsp2172E172QGaaCaa22B.1.1.70.000002
ORF1ab/nsp2172E172RGAAAGG12B.1.1.70.000001
ORF1ab/nsp2172E172RGAaAGa12B.1.1.70.000001
ORF1ab/nsp2172E172KGaaAaa22B.1.1600.000062
ORF1ab/nsp2172E172EgaAgaG22B.1.1600.000062
ORF1ab/nsp2172E172YGaATaT12B.1.1770.000013
ORF1ab/nsp2172E172FGAATTC12B.1.1770.000013
ORF1ab/nsp2172E172DgaAgaT12B.1.1770.000013
ORF1ab/nsp2172E172HGaACaT12B.1.1770.000013
ORF1ab/nsp2172E172FGAATTT12B.1.1770.000013
ORF1ab/nsp2172E172DgaAgaC12B.1.1770.000013
ORF1ab/nsp2172E172YGaATaC12B.1.1770.000013
ORF1ab/nsp2172E172HGaACaC12B.1.1770.000013
ORF1ab/nsp2172E172XGaaTaa12B.1.177.350.000691
ORF1ab/nsp2172E172XGAaTGa12B.1.177.350.000691
ORF1ab/nsp2172E172XGAaTGa12B.1.2210.000071
ORF1ab/nsp2172E172XGaaTaa12B.1.2210.000071
ORF1ab/nsp2172E172delGAA---22B.1.2580.000133
ORF1ab/nsp2172E172XGaaTaa12B.1.2580.000067
ORF1ab/nsp2172E172XGAaTGa12B.1.2580.000067
ORF1ab/nsp2172E172GgAagGa22B.1.3510.000059
ORF1ab/nsp2172E172KGaaAaa22B.1.3510.000059
ORF1ab/nsp2172E172delGAA---22B.1.617.20.000008
ORF1ab/nsp2172E172LGAATTG12B.1.6300.005236
ORF1ab/nsp2172E172VgAagTa12B.1.6300.005236
ORF1ab/nsp2172E172XGaaTaa12B.1.6300.005236
ORF1ab/nsp2172E172LGAaTTa12B.1.6300.005236
ORF1ab/nsp2172E172XGaATaG12B.1.6300.005236
ORF1ab/nsp2172E172VgAAgTG12B.1.6300.005236
ORF1ab/nsp2172E172KGaaAaa22B.390.004662
ORF1ab/nsp2172E172QGaaCaa22D.20.00015
ORF1ab/nsp2172E172delGAA---22N.60.014184
ORF1ab/nsp2172E172DgaAgaC22P.10.000032
ORF1ab/nsp2172E172DgaAgaC22P.1.10.000635
ORF1ab/nsp2172E172KGaaAaa22P.1.140.000096
ORF1ab/nsp2172E172DgaAgaT22P.1.140.000096
ORF1ab/nsp2172E172delGAA---22P.20.000373
ORF1ab/nsp2172E172XGaaTaa110.055556
ORF1ab/nsp2172E172delGAA---11A0.000387
ORF1ab/nsp2172E172DgaAgaT11A.2.50.000499
ORF1ab/nsp2172E172XGaaTaa11A.2.50.000499
ORF1ab/nsp2172E172YGaATaT11A.2.50.000499
ORF1ab/nsp2172E172MGAAATG11All0
ORF1ab/nsp2172E172PGAaCCa11All0
ORF1ab/nsp2172E172WGAATGG11All0
ORF1ab/nsp2172E172NGaAAaT11All0
ORF1ab/nsp2172E172XGaaTaa11AY.1000.000046
ORF1ab/nsp2172E172EgaAgaG11AY.1000.000046
ORF1ab/nsp2172E172DgaAgaT11AY.1010.00049
ORF1ab/nsp2172E172DgaAgaC11AY.1020.000027
ORF1ab/nsp2172E172GgAagGa11AY.1030.000006
ORF1ab/nsp2172E172GgAagGa11AY.1130.000142
ORF1ab/nsp2172E172EgaAgaG11AY.1170.000085
ORF1ab/nsp2172E172KGaaAaa11AY.1190.000035
ORF1ab/nsp2172E172GgAagGa11AY.1190.000035
ORF1ab/nsp2172E172EgaAgaG11AY.120.000316
ORF1ab/nsp2172E172AgAagCa11AY.1200.000037
ORF1ab/nsp2172E172RGAaAGa11AY.1200.000037
ORF1ab/nsp2172E172XGaaTaa11AY.1210.000135
ORF1ab/nsp2172E172XGaaTaa11AY.170.008197
ORF1ab/nsp2172E172KGaaAaa11AY.230.00007
ORF1ab/nsp2172E172delGAA---11AY.250.000006
ORF1ab/nsp2172E172DgaAgaC11AY.250.000006
ORF1ab/nsp2172E172DgaAgaT11AY.260.000028
ORF1ab/nsp2172E172KGaaAaa11AY.260.000028
ORF1ab/nsp2172E172QGaaCaa11AY.260.000028
ORF1ab/nsp2172E172delGAA---11AY.290.000016
ORF1ab/nsp2172E172EgaAgaG11AY.30.00001
ORF1ab/nsp2172E172EgaAgaG11AY.3.10.000085
ORF1ab/nsp2172E172GgAagGa11AY.320.000532
ORF1ab/nsp2172E172EgaAgaG11AY.340.000097
ORF1ab/nsp2172E172KGaaAaa11AY.390.000025
ORF1ab/nsp2172E172GgAagGa11AY.390.000025
ORF1ab/nsp2172E172DgaAgaC11AY.39.1.10.000725
ORF1ab/nsp2172E172VgAagTa11AY.40.000002
ORF1ab/nsp2172E172delGAA---11AY.40.000002
ORF1ab/nsp2172E172GgAagGa11AY.4.20.000022
ORF1ab/nsp2172E172KGaaAaa11AY.4.20.000022
ORF1ab/nsp2172E172VgAagTa11AY.400.000964
ORF1ab/nsp2172E172XGaaTaa11AY.400.000964
ORF1ab/nsp2172E172DgaAgaC11AY.420.00004
ORF1ab/nsp2172E172GgAagGa11AY.420.00004
ORF1ab/nsp2172E172GgAagGa11AY.430.000004
ORF1ab/nsp2172E172delGAA---11AY.430.000004
ORF1ab/nsp2172E172del1gAag-a11AY.440.000006
ORF1ab/nsp2172E172EgaAgaG11AY.440.000006
ORF1ab/nsp2172E172QGaaCaa11AY.440.000006
ORF1ab/nsp2172E172QGaaCaa11AY.450.000122
ORF1ab/nsp2172E172EgaAgaG11AY.460.000104
ORF1ab/nsp2172E172delGAA---11AY.460.000104
ORF1ab/nsp2172E172KGaaAaa11AY.460.000104
ORF1ab/nsp2172E172DgaAgaC11AY.46.50.000198
ORF1ab/nsp2172E172GgAagGa11AY.46.60.000072
ORF1ab/nsp2172E172KGaaAaa11AY.470.000031
ORF1ab/nsp2172E172VgAagTa11AY.470.000031
ORF1ab/nsp2172E172DgaAgaC11AY.480.000465
ORF1ab/nsp2172E172GgAagGa11AY.50.000021
ORF1ab/nsp2172E172DgaAgaC11AY.5.30.000337
ORF1ab/nsp2172E172AgAagCa11AY.510.000909
ORF1ab/nsp2172E172DgaAgaC11AY.540.000095
ORF1ab/nsp2172E172DgaAgaC11AY.60.000041
ORF1ab/nsp2172E172AgAagCa11AY.610.000105
ORF1ab/nsp2172E172DgaAgaC11AY.700.000209
ORF1ab/nsp2172E172delGAA---11AY.750.000056
ORF1ab/nsp2172E172delGAA---11AY.75.10.00018
ORF1ab/nsp2172E172XGaaTaa11AY.870.000833
ORF1ab/nsp2172E172KGaaAaa11AY.90.000068
ORF1ab/nsp2172E172XGaaTaa11AY.980.000079
ORF1ab/nsp2172E172EgaAgaG11AY.980.000079
ORF1ab/nsp2172E172KGaaAaa11AY.98.10.000048
ORF1ab/nsp2172E172KGaaAaa11B0.000128
ORF1ab/nsp2172E172FGAATTT11B.10.000009
ORF1ab/nsp2172E172YGaATaT11B.10.000009
ORF1ab/nsp2172E172RGAaAGa11B.10.000009
ORF1ab/nsp2172E172NGaAAaT11B.10.000009
ORF1ab/nsp2172E172MGAAATG11B.1.10.000018
ORF1ab/nsp2172E172WGAATGG11B.1.10.000018
ORF1ab/nsp2172E172FGAATTT11B.1.10.000018
ORF1ab/nsp2172E172CGAATGT11B.1.10.000018
ORF1ab/nsp2172E172TGAaACa11B.1.10.000018
ORF1ab/nsp2172E172YGaATaT11B.1.10.000018
ORF1ab/nsp2172E172SGAaTCa11B.1.10.000018
ORF1ab/nsp2172E172AgAagCa11B.1.10.000018
ORF1ab/nsp2172E172DgaAgaC11B.1.1.100.001115
ORF1ab/nsp2172E172EgaAgaG11B.1.1.1700.001247
ORF1ab/nsp2172E172KGaaAaa11B.1.1.2650.003155
ORF1ab/nsp2172E172VgAagTa11B.1.1.2690.001353
ORF1ab/nsp2172E172RGAaAGa11B.1.1.2770.000759
ORF1ab/nsp2172E172QGaaCaa11B.1.1.2770.000759
ORF1ab/nsp2172E172GgAagGa11B.1.1.2770.000759
ORF1ab/nsp2172E172KGaaAaa11B.1.1.2770.000759
ORF1ab/nsp2172E172KGaaAaa11B.1.1.2890.002083
ORF1ab/nsp2172E172delGAA---11B.1.1.3150.008475
ORF1ab/nsp2172E172QGaaCaa11B.1.1.330.000421
ORF1ab/nsp2172E172EgaAgaG11B.1.1.3360.016667
ORF1ab/nsp2172E172IGAaATa11B.1.1.3720.000689
ORF1ab/nsp2172E172LGAaTTa11B.1.1.3720.000689
ORF1ab/nsp2172E172XGaaTaa11B.1.1.3720.000689
ORF1ab/nsp2172E172VgAagTa11B.1.1.3720.000689
ORF1ab/nsp2172E172KGaaAaa11B.1.1.3720.000689
ORF1ab/nsp2172E172KGaaAaa11B.1.1.3850.004464
ORF1ab/nsp2172E172XGaaTaa11B.1.1.3850.004464
ORF1ab/nsp2172E172GgAagGa11B.1.1.390.00051
ORF1ab/nsp2172E172KGaaAaa11B.1.1.5190.00004
ORF1ab/nsp2172E172VgAagTa11B.1.1.70.000001
ORF1ab/nsp2172E172del1GaA-aG11B.1.1.70.000001
ORF1ab/nsp2172E172EgaAgaG11B.1.1.700.000341
ORF1ab/nsp2172E172delGAA---11B.1.1400.018868
ORF1ab/nsp2172E172del1gAag-a11B.1.1600.000031
ORF1ab/nsp2172E172GgAagGa11B.1.1600.000031
ORF1ab/nsp2172E172RGAaAGa11B.1.1600.000031
ORF1ab/nsp2172E172QGaaCaa11B.1.1670.007812
ORF1ab/nsp2172E172TGAaACa11B.1.1770.000013
ORF1ab/nsp2172E172PGAaCCa11B.1.1770.000013
ORF1ab/nsp2172E172AgAagCa11B.1.1770.000013
ORF1ab/nsp2172E172CGAATGT11B.1.1770.000013
ORF1ab/nsp2172E172IGAaATa11B.1.1770.000013
ORF1ab/nsp2172E172VgAagTa11B.1.177.330.001645
ORF1ab/nsp2172E172AgAagCa11B.1.177.330.001645
ORF1ab/nsp2172E172KGaaAaa11B.1.177.350.000691
ORF1ab/nsp2172E172RGAaAGa11B.1.177.350.000691
ORF1ab/nsp2172E172GgAagGa11B.1.177.350.000691
ORF1ab/nsp2172E172GgAagGa11B.1.177.440.000519
ORF1ab/nsp2172E172XGaaTaa11B.1.177.440.000519
ORF1ab/nsp2172E172LGAaTTa11B.1.177.440.000519
ORF1ab/nsp2172E172KGaaAaa11B.1.177.440.000519
ORF1ab/nsp2172E172VgAagTa11B.1.177.440.000519
ORF1ab/nsp2172E172EgaAgaG11B.1.177.600.000218
ORF1ab/nsp2172E172XGaaTaa11B.1.177.70.000165
ORF1ab/nsp2172E172XGaaTaa11B.1.177.770.000726
ORF1ab/nsp2172E172LGAaTTa11B.1.177.770.000726
ORF1ab/nsp2172E172VgAagTa11B.1.177.770.000726
ORF1ab/nsp2172E172XGaaTaa11B.1.1890.004292
ORF1ab/nsp2172E172KGaaAaa11B.1.20.000009
ORF1ab/nsp2172E172del1Gaa-aa11B.1.2100.002132
ORF1ab/nsp2172E172VgAagTa11B.1.2140.003663
ORF1ab/nsp2172E172QGaaCaa11B.1.2210.000071
ORF1ab/nsp2172E172KGaaAaa11B.1.2210.000071
ORF1ab/nsp2172E172GgAagGa11B.1.2210.000071
ORF1ab/nsp2172E172AgAagCa11B.1.2210.000071
ORF1ab/nsp2172E172RGAaCGa11B.1.2210.000071
ORF1ab/nsp2172E172XGaaTaa11B.1.2230.002778
ORF1ab/nsp2172E172DgaAgaC11B.1.2400.000216
ORF1ab/nsp2172E172DgaAgaT11B.1.240.10.025
ORF1ab/nsp2172E172delGAA---11B.1.2420.018868
ORF1ab/nsp2172E172KGaaAaa11B.1.2520.006623
ORF1ab/nsp2172E172GgAagGa11B.1.2580.000067
ORF1ab/nsp2172E172RGAaAGa11B.1.2580.000067
ORF1ab/nsp2172E172KGaaAaa11B.1.2840.013158
ORF1ab/nsp2172E172QGaaCaa11B.1.2840.013158
ORF1ab/nsp2172E172delGAA---11B.1.3060.005714
ORF1ab/nsp2172E172KGaaAaa11B.1.3320.003497
ORF1ab/nsp2172E172EgaAgaG11B.1.3380.008621
ORF1ab/nsp2172E172DgaAgaT11B.1.351.20.000303
ORF1ab/nsp2172E172QGaaCaa11B.1.360.000146
ORF1ab/nsp2172E172AgAagCa11B.1.36.240.006173
ORF1ab/nsp2172E172AgAagCa11B.1.4270.00005
ORF1ab/nsp2172E172delGAA---11B.1.4290.000024
ORF1ab/nsp2172E172DgaAgaC11B.1.4290.000024
ORF1ab/nsp2172E172GgAagGa11B.1.438.10.000107
ORF1ab/nsp2172E172XGaaTaa11B.1.4530.003236
ORF1ab/nsp2172E172AgAagCa11B.1.5960.000087
ORF1ab/nsp2172E172delGAA---11B.1.5960.000087
ORF1ab/nsp2172E172XGaaTaa11B.1.5990.00365
ORF1ab/nsp2172E172KGaaAaa11B.1.5990.00365
ORF1ab/nsp2172E172KGaaAaa11B.1.617.10.000129
ORF1ab/nsp2172E172XGaaTaa11B.1.617.20.000004
ORF1ab/nsp2172E172EgaAgaG11B.1.617.20.000004
ORF1ab/nsp2172E172KGaaAaa11B.1.6210.000089
ORF1ab/nsp2172E172del1gaAga-11B.1.6210.000089
ORF1ab/nsp2172E172EgaAgaG11B.1.6300.005236
ORF1ab/nsp2172E172GgAagGa11B.400.000364
ORF1ab/nsp2172E172AgAagCa11B.400.000364
ORF1ab/nsp2172E172QGaaCaa11C.350.000774
ORF1ab/nsp2172E172delGAA---11C.360.000911
ORF1ab/nsp2172E172XGaaTaa11K.10.02381
ORF1ab/nsp2172E172VgAagTa11K.10.02381
ORF1ab/nsp2172E172LGAaTTa11K.10.02381
ORF1ab/nsp2172E172XGaaTaa11P.10.000016
ORF1ab/nsp2172E172KGaaAaa11P.10.000016
ORF1ab/nsp2172E172VgAagTa11P.1.100.000269
ORF1ab/nsp2172E172DgaAgaC11P.1.170.000162
ORF1ab/nsp2172E172delGAA---11Q.20.000613