CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 165

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2165G165GG345GsynggCggT146714300.9747781298-1300
ORF1ab/nsp2165G165GG345GsynggCggA1467330.02249491298-1300
ORF1ab/nsp2165G165GG345GsynggCggG146740.002726651298-1300
ORF1ab/nsp2165G165DG345DnonsyngGcgAc63263211298-1300
ORF1ab/nsp2165G165CG345CnonsynGgcTgc33133111298-1300
ORF1ab/nsp2165G165SG345SnonsynGgcAgc24924911298-1300
ORF1ab/nsp2165G165VG345VnonsyngGcgTc83820.9879521298-1300
ORF1ab/nsp2165G165VG345VnonsyngGCgTT8310.01204821298-1300
ORF1ab/nsp2165G165delG345deldelGGC---181811298-1300
ORF1ab/nsp2165G165RG345RnonsynGgcCgc640.6666671298-1300
ORF1ab/nsp2165G165RG345RnonsynGgCAgA620.3333331298-1300
ORF1ab/nsp2165G165KG345KnonsynGGCAAA320.6666671298-1300
ORF1ab/nsp2165G165del1G345del1delggCgg-310.3333331298-1300
ORF1ab/nsp2165G165KG345KnonsynGGCAAG310.3333331298-1300
ORF1ab/nsp2165G165del1G345del1delGgc-gc310.3333331298-1300
ORF1ab/nsp2165G165del1G345del1delGgC-gT310.3333331298-1300
ORF1ab/nsp2165G165AG345AnonsyngGcgCc2211298-1300
ORF1ab/nsp2165G165del2G345del2delgGCg--210.51298-1300
ORF1ab/nsp2165G165del2G345del2delGGc--c210.51298-1300
ORF1ab/nsp2165G165WG345WnonsynGgCTgG1111298-1300
ORF1ab/nsp2165G165XG345XnonsynGgCTgA1111298-1300
ORF1ab/nsp2165G165HG345HnonsynGGCCAT1111298-1300
ORF1ab/nsp2165G165IG345InonsynGGcATc1111298-1300
ORF1ab/nsp2165G165FG345FnonsynGGcTTc1111298-1300

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2165G165GggCggT14301467All0.000274
ORF1ab/nsp2165G165GggCggA331467All0.000006
ORF1ab/nsp2165G165GggCggG41467All0.000001
ORF1ab/nsp2165G165DgGcgAc632632All0.000121
ORF1ab/nsp2165G165GggCggT353353AY.40.000549
ORF1ab/nsp2165G165CGgcTgc331331All0.000063
ORF1ab/nsp2165G165GggCggT289289AY.330.019299
ORF1ab/nsp2165G165GggCggT273284B.1.1.70.000244
ORF1ab/nsp2165G165GggCggA11284B.1.1.70.00001
ORF1ab/nsp2165G165SGgcAgc249249All0.000048
ORF1ab/nsp2165G165DgGcgAc196196B.1.1.70.000175
ORF1ab/nsp2165G165CGgcTgc167167B.1.1.70.00015
ORF1ab/nsp2165G165DgGcgAc133133AY.440.00081
ORF1ab/nsp2165G165VgGcgTc8283All0.000016
ORF1ab/nsp2165G165VgGCgTT183All0
ORF1ab/nsp2165G165SGgcAgc7474B.1.3850.787234
ORF1ab/nsp2165G165GggCggT7373AY.250.000439
ORF1ab/nsp2165G165DgGcgAc5959AY.40.000092
ORF1ab/nsp2165G165GggCggT5757B.1.5391
ORF1ab/nsp2165G165SGgcAgc4646B.1.4370.958333
ORF1ab/nsp2165G165GggCggT4444AY.430.000195
ORF1ab/nsp2165G165CGgcTgc4141B.1.4290.000965
ORF1ab/nsp2165G165GggCggT3334B.1.20.000291
ORF1ab/nsp2165G165GggCggA134B.1.20.000009
ORF1ab/nsp2165G165GggCggT3030B.1.1.5190.001191
ORF1ab/nsp2165G165GggCggT2627AY.440.000158
ORF1ab/nsp2165G165GggCggA127AY.440.000006
ORF1ab/nsp2165G165CGgcTgc2626AY.40.00004
ORF1ab/nsp2165G165GggCggT2224B.1.617.20.000083
ORF1ab/nsp2165G165GggCggG224B.1.617.20.000008
ORF1ab/nsp2165G165SGgcAgc2323B.1.1.70.000021
ORF1ab/nsp2165G165DgGcgAc2323P.1.140.001099
ORF1ab/nsp2165G165GggCggT2122B.10.000192
ORF1ab/nsp2165G165GggCggG122B.10.000009
ORF1ab/nsp2165G165GggCggT2222P.10.000347
ORF1ab/nsp2165G165DgGcgAc2020B.1.617.20.000075
ORF1ab/nsp2165G165DgGcgAc1919AY.5.30.00641
ORF1ab/nsp2165G165VgGcgTc1919B.1.1.70.000017
ORF1ab/nsp2165G165delGGC---1818All0.000003
ORF1ab/nsp2165G165DgGcgAc1818AY.250.000108
ORF1ab/nsp2165G165SGgcAgc1515B.1.617.20.000056
ORF1ab/nsp2165G165DgGcgAc1414AY.1030.000087
ORF1ab/nsp2165G165SGgcAgc1414AY.40.000022
ORF1ab/nsp2165G165CGgcTgc1414AY.7.10.001578
ORF1ab/nsp2165G165GggCggT1414B.1.617.10.001806
ORF1ab/nsp2165G165DgGcgAc1313P.10.000205
ORF1ab/nsp2165G165DgGcgAc1212AY.430.000053
ORF1ab/nsp2165G165DgGcgAc1212B.1.4290.000282
ORF1ab/nsp2165G165GggCggT1212B.1.5960.001046
ORF1ab/nsp2165G165DgGcgAc1111AY.200.000428
ORF1ab/nsp2165G165VgGcgTc1111AY.40.000017
ORF1ab/nsp2165G165SGgcAgc1111B.1.1600.000343
ORF1ab/nsp2165G165GggCggT89B.1.4290.000188
ORF1ab/nsp2165G165GggCggA19B.1.4290.000024
ORF1ab/nsp2165G165DgGcgAc99B.1.621.10.004552
ORF1ab/nsp2165G165CGgcTgc88AY.1210.001083
ORF1ab/nsp2165G165GggCggA88B.1.1600.00025
ORF1ab/nsp2165G165CGgcTgc88B.1.617.20.00003
ORF1ab/nsp2165G165GggCggT77AY.1190.000247
ORF1ab/nsp2165G165GggCggT77AY.230.000488
ORF1ab/nsp2165G165CGgcTgc77AY.430.000031
ORF1ab/nsp2165G165GggCggT77B.1.1770.000092
ORF1ab/nsp2165G165RGgcCgc46All0.000001
ORF1ab/nsp2165G165RGgCAgA26All0
ORF1ab/nsp2165G165GggCggT66AY.1030.000037
ORF1ab/nsp2165G165GggCggT66AY.34.10.00306
ORF1ab/nsp2165G165GggCggT66B.1.1.2140.000333
ORF1ab/nsp2165G165GggCggT66B.1.177.870.004367
ORF1ab/nsp2165G165SGgcAgc55AY.1190.000177
ORF1ab/nsp2165G165GggCggT55AY.200.000194
ORF1ab/nsp2165G165SGgcAgc55AY.250.00003
ORF1ab/nsp2165G165VgGcgTc55AY.30.00005
ORF1ab/nsp2165G165GggCggT45AY.390.000099
ORF1ab/nsp2165G165GggCggA15AY.390.000025
ORF1ab/nsp2165G165DgGcgAc55AY.39.10.000198
ORF1ab/nsp2165G165DgGcgAc55AY.470.000156
ORF1ab/nsp2165G165GggCggT45AY.610.000419
ORF1ab/nsp2165G165GggCggA15AY.610.000105
ORF1ab/nsp2165G165GggCggT55AY.9.20.000184
ORF1ab/nsp2165G165CGgcTgc55B.10.000046
ORF1ab/nsp2165G165VgGcgTc45B.10.000037
ORF1ab/nsp2165G165VgGCgTT15B.10.000009
ORF1ab/nsp2165G165delGGC---55B.1.1.330.002104
ORF1ab/nsp2165G165DgGcgAc44AY.1190.000141
ORF1ab/nsp2165G165CGgcTgc44AY.250.000024
ORF1ab/nsp2165G165DgGcgAc44AY.30.00004
ORF1ab/nsp2165G165GggCggT44AY.30.00004
ORF1ab/nsp2165G165DgGcgAc44AY.4.20.000087
ORF1ab/nsp2165G165VgGcgTc44AY.46.40.000658
ORF1ab/nsp2165G165SGgcAgc44B.10.000037
ORF1ab/nsp2165G165SGgcAgc44B.1.1770.000053
ORF1ab/nsp2165G165DgGcgAc44B.1.1770.000053
ORF1ab/nsp2165G165DgGcgAc44B.1.20.000035
ORF1ab/nsp2165G165GggCggT44B.1.3490.002859
ORF1ab/nsp2165G165GggCggT44B.1.5880.00364
ORF1ab/nsp2165G165VgGcgTc44B.1.617.20.000015
ORF1ab/nsp2165G165KGGCAAA23All0
ORF1ab/nsp2165G165del1Ggc-gc13All0
ORF1ab/nsp2165G165del1GgC-gT13All0
ORF1ab/nsp2165G165del1ggCgg-13All0
ORF1ab/nsp2165G165KGGCAAG13All0
ORF1ab/nsp2165G165CGgcTgc33AY.1000.000138
ORF1ab/nsp2165G165CGgcTgc33AY.1020.00008
ORF1ab/nsp2165G165CGgcTgc33AY.1030.000019
ORF1ab/nsp2165G165VgGcgTc33AY.1030.000019
ORF1ab/nsp2165G165CGgcTgc33AY.1180.000188
ORF1ab/nsp2165G165DgGcgAc33AY.260.000085
ORF1ab/nsp2165G165GggCggA33AY.340.000291
ORF1ab/nsp2165G165DgGcgAc33AY.340.000291
ORF1ab/nsp2165G165DgGcgAc33AY.390.000074
ORF1ab/nsp2165G165VgGcgTc33AY.390.000074
ORF1ab/nsp2165G165SGgcAgc33AY.430.000013
ORF1ab/nsp2165G165GggCggT33AY.50.000062
ORF1ab/nsp2165G165CGgcTgc33AY.50.000062
ORF1ab/nsp2165G165DgGcgAc33AY.610.000314
ORF1ab/nsp2165G165DgGcgAc33AY.980.000237
ORF1ab/nsp2165G165DgGcgAc33B.10.000027
ORF1ab/nsp2165G165delGGC---33B.1.1.3480.002389
ORF1ab/nsp2165G165delGGC---33B.1.1.70.000003
ORF1ab/nsp2165G165GggCggA33B.1.4040.003906
ORF1ab/nsp2165G165DgGcgAc33B.1.5230.007353
ORF1ab/nsp2165G165SGgcAgc33B.1.5260.000071
ORF1ab/nsp2165G165DgGcgAc33B.1.5260.000071
ORF1ab/nsp2165G165SGgcAgc33B.1.5960.000261
ORF1ab/nsp2165G165AgGcgCc22All0
ORF1ab/nsp2165G165del2GGc--c12All0
ORF1ab/nsp2165G165del2gGCg--12All0
ORF1ab/nsp2165G165GggCggT22AY.1000.000092
ORF1ab/nsp2165G165DgGcgAc22AY.1020.000053
ORF1ab/nsp2165G165GggCggT22AY.1100.000225
ORF1ab/nsp2165G165SGgcAgc22AY.1200.000074
ORF1ab/nsp2165G165GggCggT22AY.260.000057
ORF1ab/nsp2165G165SGgcAgc22AY.270.000129
ORF1ab/nsp2165G165CGgcTgc22AY.340.000194
ORF1ab/nsp2165G165VgGcgTc22AY.39.10.000079
ORF1ab/nsp2165G165DgGcgAc22AY.4.50.000215
ORF1ab/nsp2165G165SGgcAgc22AY.460.000208
ORF1ab/nsp2165G165SGgcAgc22AY.510.001818
ORF1ab/nsp2165G165GggCggT22AY.60.000082
ORF1ab/nsp2165G165CGgcTgc22AY.690.000373
ORF1ab/nsp2165G165GggCggT22AY.90.000135
ORF1ab/nsp2165G165CGgcTgc22B0.000256
ORF1ab/nsp2165G165DgGcgAc22B.1.10.000036
ORF1ab/nsp2165G165SGgcAgc22B.1.1.1740.006757
ORF1ab/nsp2165G165GggCggT22B.1.1.2160.001781
ORF1ab/nsp2165G165GggCggT22B.1.1.2280.006098
ORF1ab/nsp2165G165CGgcTgc22B.1.1.4160.00181
ORF1ab/nsp2165G165GggCggT22B.1.1.4200.002012
ORF1ab/nsp2165G165CGgcTgc22B.1.1.5190.000079
ORF1ab/nsp2165G165RGgcCgc22B.1.1.70.000002
ORF1ab/nsp2165G165GggCggT22B.1.1420.005797
ORF1ab/nsp2165G165CGgcTgc22B.1.177.40.000422
ORF1ab/nsp2165G165GggCggT22B.1.177.520.003515
ORF1ab/nsp2165G165RGgcCgc22B.1.20.000018
ORF1ab/nsp2165G165del1Ggc-gc12B.1.20.000009
ORF1ab/nsp2165G165del1ggCgg-12B.1.20.000009
ORF1ab/nsp2165G165GggCggT22B.1.2210.000142
ORF1ab/nsp2165G165SGgcAgc22B.1.2400.000431
ORF1ab/nsp2165G165DgGcgAc22B.1.2430.000139
ORF1ab/nsp2165G165DgGcgAc22B.1.2580.000133
ORF1ab/nsp2165G165CGgcTgc22B.1.3510.000059
ORF1ab/nsp2165G165SGgcAgc22B.1.4160.002538
ORF1ab/nsp2165G165SGgcAgc22B.1.4480.005249
ORF1ab/nsp2165G165GggCggT22B.1.5820.000981
ORF1ab/nsp2165G165GggCggT22B.1.6090.000959
ORF1ab/nsp2165G165DgGcgAc22B.1.6210.000177
ORF1ab/nsp2165G165GggCggT22B.1.6210.000177
ORF1ab/nsp2165G165GggCggT22B.1.6280.000705
ORF1ab/nsp2165G165DgGcgAc22B.1.9.50.011364
ORF1ab/nsp2165G165delGGC---22N.60.014184
ORF1ab/nsp2165G165delGGC---22P.20.000373
ORF1ab/nsp2165G165GggCggG110.055556
ORF1ab/nsp2165G165GggCggT11A.2.50.000499
ORF1ab/nsp2165G165DgGcgAc11A.23.10.000704
ORF1ab/nsp2165G165GggCggT11AE.80.000489
ORF1ab/nsp2165G165WGgCTgG11All0
ORF1ab/nsp2165G165FGGcTTc11All0
ORF1ab/nsp2165G165IGGcATc11All0
ORF1ab/nsp2165G165HGGCCAT11All0
ORF1ab/nsp2165G165XGgCTgA11All0
ORF1ab/nsp2165G165CGgcTgc11AY.100.00053
ORF1ab/nsp2165G165SGgcAgc11AY.1020.000027
ORF1ab/nsp2165G165VgGcgTc11AY.1020.000027
ORF1ab/nsp2165G165GggCggT11AY.1020.000027
ORF1ab/nsp2165G165KGGCAAA11AY.1030.000006
ORF1ab/nsp2165G165SGgcAgc11AY.1030.000006
ORF1ab/nsp2165G165del1GgC-gT11AY.1030.000006
ORF1ab/nsp2165G165VgGcgTc11AY.1060.000335
ORF1ab/nsp2165G165CGgcTgc11AY.1090.00074
ORF1ab/nsp2165G165GggCggT11AY.1170.000085
ORF1ab/nsp2165G165VgGcgTc11AY.1180.000063
ORF1ab/nsp2165G165SGgcAgc11AY.1180.000063
ORF1ab/nsp2165G165KGGCAAG11AY.1190.000035
ORF1ab/nsp2165G165CGgcTgc11AY.1200.000037
ORF1ab/nsp2165G165DgGcgAc11AY.1200.000037
ORF1ab/nsp2165G165GggCggT11AY.120.10.000321
ORF1ab/nsp2165G165GggCggT11AY.120.20.001285
ORF1ab/nsp2165G165VgGcgTc11AY.200.000039
ORF1ab/nsp2165G165SGgcAgc11AY.230.00007
ORF1ab/nsp2165G165GggCggT11AY.240.000431
ORF1ab/nsp2165G165DgGcgAc11AY.240.000431
ORF1ab/nsp2165G165VgGcgTc11AY.260.000028
ORF1ab/nsp2165G165DgGcgAc11AY.270.000065
ORF1ab/nsp2165G165GggCggT11AY.270.000065
ORF1ab/nsp2165G165VgGcgTc11AY.290.000016
ORF1ab/nsp2165G165VgGcgTc11AY.29.10.000221
ORF1ab/nsp2165G165RGgCAgA11AY.30.00001
ORF1ab/nsp2165G165CGgcTgc11AY.30.00001
ORF1ab/nsp2165G165VgGcgTc11AY.3.10.000085
ORF1ab/nsp2165G165SGgcAgc11AY.340.000097
ORF1ab/nsp2165G165SGgcAgc11AY.380.000499
ORF1ab/nsp2165G165CGgcTgc11AY.390.000025
ORF1ab/nsp2165G165SGgcAgc11AY.390.000025
ORF1ab/nsp2165G165delGGC---11AY.40.000002
ORF1ab/nsp2165G165CGgcTgc11AY.4.20.000022
ORF1ab/nsp2165G165DgGcgAc11AY.4.40.000409
ORF1ab/nsp2165G165SGgcAgc11AY.4.50.000107
ORF1ab/nsp2165G165GggCggA11AY.4.50.000107
ORF1ab/nsp2165G165HGGCCAT11AY.400.000964
ORF1ab/nsp2165G165GggCggT11AY.420.00004
ORF1ab/nsp2165G165SGgcAgc11AY.440.000006
ORF1ab/nsp2165G165VgGcgTc11AY.440.000006
ORF1ab/nsp2165G165del2gGCg--11AY.440.000006
ORF1ab/nsp2165G165VgGcgTc11AY.450.000122
ORF1ab/nsp2165G165GggCggT11AY.460.000104
ORF1ab/nsp2165G165GggCggT11AY.46.40.000165
ORF1ab/nsp2165G165DgGcgAc11AY.46.50.000198
ORF1ab/nsp2165G165KGGCAAA11AY.470.000031
ORF1ab/nsp2165G165GggCggT11AY.480.000465
ORF1ab/nsp2165G165GggCggT11AY.540.000095
ORF1ab/nsp2165G165VgGcgTc11AY.540.000095
ORF1ab/nsp2165G165VgGcgTc11AY.590.00053
ORF1ab/nsp2165G165CGgcTgc11AY.60.000041
ORF1ab/nsp2165G165VgGcgTc11AY.680.000274
ORF1ab/nsp2165G165CGgcTgc11AY.70.000196
ORF1ab/nsp2165G165VgGcgTc11AY.7.10.000113
ORF1ab/nsp2165G165DgGcgAc11AY.7.10.000113
ORF1ab/nsp2165G165CGgcTgc11AY.750.000056
ORF1ab/nsp2165G165GggCggT11AY.750.000056
ORF1ab/nsp2165G165delGGC---11AY.750.000056
ORF1ab/nsp2165G165CGgcTgc11AY.75.10.00018
ORF1ab/nsp2165G165DgGcgAc11AY.770.001127
ORF1ab/nsp2165G165DgGcgAc11AY.850.000427
ORF1ab/nsp2165G165GggCggT11AY.860.00083
ORF1ab/nsp2165G165VgGcgTc11AY.9.10.000084
ORF1ab/nsp2165G165CGgcTgc11AY.9.10.000084
ORF1ab/nsp2165G165GggCggT11AY.910.00073
ORF1ab/nsp2165G165SGgcAgc11AY.950.000761
ORF1ab/nsp2165G165CGgcTgc11AY.980.000079
ORF1ab/nsp2165G165VgGcgTc11AY.980.000079
ORF1ab/nsp2165G165GggCggT11AY.98.10.000048
ORF1ab/nsp2165G165SGgcAgc11B0.000128
ORF1ab/nsp2165G165IGGcATc11B.10.000009
ORF1ab/nsp2165G165WGgCTgG11B.10.000009
ORF1ab/nsp2165G165GggCggT11B.1.10.000018
ORF1ab/nsp2165G165VgGcgTc11B.1.10.000018
ORF1ab/nsp2165G165GggCggT11B.1.1.1340.011364
ORF1ab/nsp2165G165GggCggT11B.1.1.1920.002309
ORF1ab/nsp2165G165VgGcgTc11B.1.1.2260.005814
ORF1ab/nsp2165G165DgGcgAc11B.1.1.2750.011236
ORF1ab/nsp2165G165SGgcAgc11B.1.1.280.000311
ORF1ab/nsp2165G165GggCggT11B.1.1.280.000311
ORF1ab/nsp2165G165GggCggT11B.1.1.2880.001916
ORF1ab/nsp2165G165DgGcgAc11B.1.1.3030.002762
ORF1ab/nsp2165G165GggCggT11B.1.1.3170.000412
ORF1ab/nsp2165G165VgGcgTc11B.1.1.3740.002375
ORF1ab/nsp2165G165GggCggT11B.1.1.4160.000905
ORF1ab/nsp2165G165DgGcgAc11B.1.1.5190.00004
ORF1ab/nsp2165G165FGGcTTc11B.1.1.70.000001
ORF1ab/nsp2165G165CGgcTgc11B.1.1.700.000341
ORF1ab/nsp2165G165CGgcTgc11B.1.1270.002198
ORF1ab/nsp2165G165CGgcTgc11B.1.1600.000031
ORF1ab/nsp2165G165VgGcgTc11B.1.1770.000013
ORF1ab/nsp2165G165SGgcAgc11B.1.177.250.014925
ORF1ab/nsp2165G165GggCggT11B.1.177.40.000211
ORF1ab/nsp2165G165DgGcgAc11B.1.177.570.000281
ORF1ab/nsp2165G165GggCggT11B.1.177.600.000218
ORF1ab/nsp2165G165DgGcgAc11B.1.177.650.000665
ORF1ab/nsp2165G165GggCggT11B.1.177.80.000752
ORF1ab/nsp2165G165GggCggT11B.1.177.840.006667
ORF1ab/nsp2165G165SGgcAgc11B.1.1950.005025
ORF1ab/nsp2165G165AgGcgCc11B.1.20.000009
ORF1ab/nsp2165G165CGgcTgc11B.1.20.000009
ORF1ab/nsp2165G165VgGcgTc11B.1.20.000009
ORF1ab/nsp2165G165SGgcAgc11B.1.20.000009
ORF1ab/nsp2165G165CGgcTgc11B.1.2080.04
ORF1ab/nsp2165G165DgGcgAc11B.1.2100.002132
ORF1ab/nsp2165G165XGgCTgA11B.1.3320.003497
ORF1ab/nsp2165G165SGgcAgc11B.1.3510.00003
ORF1ab/nsp2165G165GggCggT11B.1.3510.00003
ORF1ab/nsp2165G165VgGcgTc11B.1.3510.00003
ORF1ab/nsp2165G165GggCggT11B.1.3560.001727
ORF1ab/nsp2165G165GggCggT11B.1.360.000146
ORF1ab/nsp2165G165VgGcgTc11B.1.360.000146
ORF1ab/nsp2165G165CGgcTgc11B.1.3960.000706
ORF1ab/nsp2165G165GggCggT11B.1.4090.000781
ORF1ab/nsp2165G165GggCggT11B.1.4160.001269
ORF1ab/nsp2165G165DgGcgAc11B.1.4220.000812
ORF1ab/nsp2165G165GggCggT11B.1.4270.00005
ORF1ab/nsp2165G165delGGC---11B.1.4290.000024
ORF1ab/nsp2165G165SGgcAgc11B.1.4290.000024
ORF1ab/nsp2165G165del2GGc--c11B.1.4370.020833
ORF1ab/nsp2165G165DgGcgAc11B.1.438.10.000107
ORF1ab/nsp2165G165SGgcAgc11B.1.438.10.000107
ORF1ab/nsp2165G165SGgcAgc11B.1.5210.004975
ORF1ab/nsp2165G165GggCggT11B.1.5260.000024
ORF1ab/nsp2165G165GggCggA11B.1.5460.003704
ORF1ab/nsp2165G165CGgcTgc11B.1.5640.000426
ORF1ab/nsp2165G165DgGcgAc11B.1.564.10.001577
ORF1ab/nsp2165G165AgGcgCc11B.1.5710.009709
ORF1ab/nsp2165G165DgGcgAc11B.1.5750.000303
ORF1ab/nsp2165G165CGgcTgc11B.1.5890.007576
ORF1ab/nsp2165G165VgGcgTc11B.1.5960.000087
ORF1ab/nsp2165G165DgGcgAc11B.1.5960.000087
ORF1ab/nsp2165G165RGgCAgA11B.1.617.20.000004
ORF1ab/nsp2165G165SGgcAgc11B.1.6200.000946
ORF1ab/nsp2165G165SGgcAgc11B.1.6210.000089
ORF1ab/nsp2165G165VgGcgTc11B.1.6370.000073
ORF1ab/nsp2165G165CGgcTgc11B.400.000364
ORF1ab/nsp2165G165GggCggT11B.60.00091
ORF1ab/nsp2165G165GggCggT11C.350.000774
ORF1ab/nsp2165G165SGgcAgc11C.370.000116
ORF1ab/nsp2165G165GggCggT11C.370.000116
ORF1ab/nsp2165G165DgGcgAc11C.370.000116
ORF1ab/nsp2165G165DgGcgAc11D.20.000075
ORF1ab/nsp2165G165GggCggT11N.30.005814
ORF1ab/nsp2165G165GggCggT11N.90.005952
ORF1ab/nsp2165G165SGgcAgc11P.10.000016
ORF1ab/nsp2165G165CGgcTgc11P.10.000016
ORF1ab/nsp2165G165GggCggT11P.1.150.000232
ORF1ab/nsp2165G165GggCggT11P.1.170.000162
ORF1ab/nsp2165G165DgGcgAc11P.1.60.001946
ORF1ab/nsp2165G165VgGcgTc11P.20.000187
ORF1ab/nsp2165G165GggCggT11Q.10.000126
ORF1ab/nsp2165G165GggCggT11Q.30.000145
ORF1ab/nsp2165G165DgGcgAc11Q.40.000455
ORF1ab/nsp2165G165GggCggT11Q.80.000165
ORF1ab/nsp2165G165DgGcgAc11Q.80.000165
ORF1ab/nsp2165G165VgGcgTc11R.10.00009
ORF1ab/nsp2165G165GggCggA11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.