CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 16 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp216Y16HY196HnonsynTacCac9849841851-853

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp216Y16HTacCac984984All0.000188
ORF1ab/nsp216Y16HTacCac295295AY.40.000459
ORF1ab/nsp216Y16HTacCac139139B.1.1.70.000124
ORF1ab/nsp216Y16HTacCac7878AY.440.000475
ORF1ab/nsp216Y16HTacCac6666B.1.617.20.000249
ORF1ab/nsp216Y16HTacCac3030AY.60.001234
ORF1ab/nsp216Y16HTacCac2323AY.1190.000812
ORF1ab/nsp216Y16HTacCac1919AY.1020.000504
ORF1ab/nsp216Y16HTacCac1919AY.390.00047
ORF1ab/nsp216Y16HTacCac1818B.1.160.140.038136
ORF1ab/nsp216Y16HTacCac1818P.10.000284
ORF1ab/nsp216Y16HTacCac1717AY.30.000169
ORF1ab/nsp216Y16HTacCac1717C.36.30.009643
ORF1ab/nsp216Y16HTacCac1616AY.98.10.000775
ORF1ab/nsp216Y16HTacCac1515AY.1200.000558
ORF1ab/nsp216Y16HTacCac1515AY.200.000583
ORF1ab/nsp216Y16HTacCac1313AY.430.000058
ORF1ab/nsp216Y16HTacCac1313B.10.000119
ORF1ab/nsp216Y16HTacCac1212AY.1030.000075
ORF1ab/nsp216Y16HTacCac1010B.1.177.350.006911
ORF1ab/nsp216Y16HTacCac99B.1.10.000163
ORF1ab/nsp216Y16HTacCac88AY.1000.000368
ORF1ab/nsp216Y16HTacCac88B.1.617.10.001032
ORF1ab/nsp216Y16HTacCac66AY.1180.000376
ORF1ab/nsp216Y16HTacCac66B.1.1770.000079
ORF1ab/nsp216Y16HTacCac55AY.39.10.000198
ORF1ab/nsp216Y16HTacCac55AY.9.10.000419
ORF1ab/nsp216Y16HTacCac55AY.990.005247
ORF1ab/nsp216Y16HTacCac44AY.230.000279
ORF1ab/nsp216Y16HTacCac44AY.250.000024
ORF1ab/nsp216Y16HTacCac44AY.75.10.000721
ORF1ab/nsp216Y16HTacCac33AY.140.000264
ORF1ab/nsp216Y16HTacCac33AY.4.20.000065
ORF1ab/nsp216Y16HTacCac33AY.610.000314
ORF1ab/nsp216Y16HTacCac33B.1.1.5190.000119
ORF1ab/nsp216Y16HTacCac33B.1.1600.000094
ORF1ab/nsp216Y16HTacCac33B.1.1820.021739
ORF1ab/nsp216Y16HTacCac33B.1.20.000026
ORF1ab/nsp216Y16HTacCac33B.1.4270.000151
ORF1ab/nsp216Y16HTacCac33B.1.466.20.001174
ORF1ab/nsp216Y16HTacCac22AY.260.000057
ORF1ab/nsp216Y16HTacCac22AY.3.10.000171
ORF1ab/nsp216Y16HTacCac22AY.360.000296
ORF1ab/nsp216Y16HTacCac22AY.450.000243
ORF1ab/nsp216Y16HTacCac22AY.46.40.000329
ORF1ab/nsp216Y16HTacCac22AY.470.000062
ORF1ab/nsp216Y16HTacCac22AY.50.000041
ORF1ab/nsp216Y16HTacCac22AY.750.000112
ORF1ab/nsp216Y16HTacCac22B.1.1.10.000653
ORF1ab/nsp216Y16HTacCac22B.1.2430.000139
ORF1ab/nsp216Y16HTacCac22B.1.4290.000047
ORF1ab/nsp216Y16HTacCac22B.1.6210.000177
ORF1ab/nsp216Y16HTacCac110.055556
ORF1ab/nsp216Y16HTacCac11A.20.000662
ORF1ab/nsp216Y16HTacCac11AY.1080.001103
ORF1ab/nsp216Y16HTacCac11AY.130.000161
ORF1ab/nsp216Y16HTacCac11AY.240.000431
ORF1ab/nsp216Y16HTacCac11AY.290.000016
ORF1ab/nsp216Y16HTacCac11AY.300.000396
ORF1ab/nsp216Y16HTacCac11AY.330.000067
ORF1ab/nsp216Y16HTacCac11AY.34.10.00051
ORF1ab/nsp216Y16HTacCac11AY.4.40.000409
ORF1ab/nsp216Y16HTacCac11AY.4.50.000107
ORF1ab/nsp216Y16HTacCac11AY.420.00004
ORF1ab/nsp216Y16HTacCac11AY.680.000274
ORF1ab/nsp216Y16HTacCac11AY.690.000187
ORF1ab/nsp216Y16HTacCac11AY.810.001992
ORF1ab/nsp216Y16HTacCac11AY.9.20.000037
ORF1ab/nsp216Y16HTacCac11AY.910.00073
ORF1ab/nsp216Y16HTacCac11B.1.1.1470.090909
ORF1ab/nsp216Y16HTacCac11B.1.1.280.000311
ORF1ab/nsp216Y16HTacCac11B.1.1.3690.000446
ORF1ab/nsp216Y16HTacCac11B.1.177.120.000152
ORF1ab/nsp216Y16HTacCac11B.1.177.180.00116
ORF1ab/nsp216Y16HTacCac11B.1.177.560.000668
ORF1ab/nsp216Y16HTacCac11B.1.177.690.001484
ORF1ab/nsp216Y16HTacCac11B.1.2210.000071
ORF1ab/nsp216Y16HTacCac11B.1.2400.000216
ORF1ab/nsp216Y16HTacCac11B.1.3110.000275
ORF1ab/nsp216Y16HTacCac11B.1.3510.00003
ORF1ab/nsp216Y16HTacCac11B.1.36.170.000494
ORF1ab/nsp216Y16HTacCac11B.1.5260.000024
ORF1ab/nsp216Y16HTacCac11B.1.5270.003704
ORF1ab/nsp216Y16HTacCac11B.1.5960.000087
ORF1ab/nsp216Y16HTacCac11C.230.005814
ORF1ab/nsp216Y16HTacCac11D.20.000075
ORF1ab/nsp216Y16HTacCac11P.20.000187
ORF1ab/nsp216Y16HTacCac11Q.80.000165