CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 140 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2140L140LL320LsynctCctA780130.01666671223-1225

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2140L140LctCctA13780All0.000002
ORF1ab/nsp2140L140LctCctA1232B.1.1.70.000001
ORF1ab/nsp2140L140LctCctA125B.1.617.20.000004
ORF1ab/nsp2140L140LctCctA24B.1.5260.000047
ORF1ab/nsp2140L140LctCctA13AY.1030.000006
ORF1ab/nsp2140L140LctCctA13B.1.3510.00003
ORF1ab/nsp2140L140LctCctA12AY.610.000105
ORF1ab/nsp2140L140LctCctA11AY.46.60.000072
ORF1ab/nsp2140L140LctCctA11AY.470.000031
ORF1ab/nsp2140L140LctCctA11AY.99.20.000092
ORF1ab/nsp2140L140LctCctA11B.1.1.3180.000302
ORF1ab/nsp2140L140LctCctA11B.40.002208
ORF1ab/nsp2140L140LctCctA11B.60.00091