CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 122 & Codon = tcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2122S122SS302SsyntcTtcC137313300.9686821169-1171

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2122S122StcTtcC13301373All0.000254
ORF1ab/nsp2122S122StcTtcC976976B.1.3750.8
ORF1ab/nsp2122S122StcTtcC110110AY.470.003422
ORF1ab/nsp2122S122StcTtcC4040AY.390.000988
ORF1ab/nsp2122S122StcTtcC834B.1.1770.000105
ORF1ab/nsp2122S122StcTtcC3131B.10.000284
ORF1ab/nsp2122S122StcTtcC2224AY.40.000034
ORF1ab/nsp2122S122StcTtcC1823B.1.1.70.000016
ORF1ab/nsp2122S122StcTtcC2222AY.30.000219
ORF1ab/nsp2122S122StcTtcC1922AY.440.000116
ORF1ab/nsp2122S122StcTtcC1414AY.430.000062
ORF1ab/nsp2122S122StcTtcC99B.1.351.50.005396
ORF1ab/nsp2122S122StcTtcC89B.1.617.20.00003
ORF1ab/nsp2122S122StcTtcC88B.1.2060.006525
ORF1ab/nsp2122S122StcTtcC44B.1.1.3060.001754
ORF1ab/nsp2122S122StcTtcC44B.1.3670.00317
ORF1ab/nsp2122S122StcTtcC33B.1.10.000054
ORF1ab/nsp2122S122StcTtcC33B.1.5250.000339
ORF1ab/nsp2122S122StcTtcC12AY.130.000161
ORF1ab/nsp2122S122StcTtcC22AY.250.000012
ORF1ab/nsp2122S122StcTtcC22AY.4.20.000043
ORF1ab/nsp2122S122StcTtcC22B.1.1.2840.000215
ORF1ab/nsp2122S122StcTtcC22B.1.20.000018
ORF1ab/nsp2122S122StcTtcC22B.1.5260.000047
ORF1ab/nsp2122S122StcTtcC22B.1.6370.000146
ORF1ab/nsp2122S122StcTtcC22P.1.170.000324
ORF1ab/nsp2122S122StcTtcC11A0.000387
ORF1ab/nsp2122S122StcTtcC11AY.1020.000027
ORF1ab/nsp2122S122StcTtcC11AY.1190.000035
ORF1ab/nsp2122S122StcTtcC11AY.260.000028
ORF1ab/nsp2122S122StcTtcC11AY.290.000016
ORF1ab/nsp2122S122StcTtcC11AY.50.000021
ORF1ab/nsp2122S122StcTtcC11AY.670.000464
ORF1ab/nsp2122S122StcTtcC11AY.7.20.000559
ORF1ab/nsp2122S122StcTtcC11AY.9.10.000084
ORF1ab/nsp2122S122StcTtcC11AY.910.00073
ORF1ab/nsp2122S122StcTtcC11B.1.2400.000216
ORF1ab/nsp2122S122StcTtcC11B.1.3690.000285
ORF1ab/nsp2122S122StcTtcC11B.1.3820.008929
ORF1ab/nsp2122S122StcTtcC11B.1.3960.000706
ORF1ab/nsp2122S122StcTtcC11B.1.4270.00005
ORF1ab/nsp2122S122StcTtcC11B.400.000364