CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 122 & Codon = Cct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2122S122PS302PnonsynTctCct2202180.9909091169-1171

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2122S122PTctCct218220All0.000042
ORF1ab/nsp2122S122PTctCct2930B.1.1.70.000026
ORF1ab/nsp2122S122PTctCct2828AY.440.00017
ORF1ab/nsp2122S122PTctCct1717AY.1030.000106
ORF1ab/nsp2122S122PTctCct1717B.1.1.2220.003468
ORF1ab/nsp2122S122PTctCct1414AY.30.000139
ORF1ab/nsp2122S122PTctCct1212AY.40.000019
ORF1ab/nsp2122S122PTctCct1212B.1.6230.006438
ORF1ab/nsp2122S122PTctCct77B.1.10.000127
ORF1ab/nsp2122S122PTctCct66AY.250.000036
ORF1ab/nsp2122S122PTctCct66B.10.000055
ORF1ab/nsp2122S122PTctCct66B.1.1600.000187
ORF1ab/nsp2122S122PTctCct66B.1.2700.033708
ORF1ab/nsp2122S122PTctCct55B.1.177.810.000947
ORF1ab/nsp2122S122PTctCct55B.1.617.20.000019
ORF1ab/nsp2122S122PTctCct44B.1.1770.000053
ORF1ab/nsp2122S122PTctCct33B.1.36.70.012
ORF1ab/nsp2122S122PTctCct33B.1.4090.002344
ORF1ab/nsp2122S122PTctCct33C.170.166667
ORF1ab/nsp2122S122PTctCct33P.10.000047
ORF1ab/nsp2122S122PTctCct22AY.1000.000092
ORF1ab/nsp2122S122PTctCct22AY.1020.000053
ORF1ab/nsp2122S122PTctCct22AY.1170.000169
ORF1ab/nsp2122S122PTctCct22AY.850.000854
ORF1ab/nsp2122S122PTctCct22B.1.2390.002442
ORF1ab/nsp2122S122PTctCct22C.360.001821
ORF1ab/nsp2122S122PTctCct22P.1.140.000096
ORF1ab/nsp2122S122PTctCct11AY.1200.000037
ORF1ab/nsp2122S122PTctCct11AY.16.10.00047
ORF1ab/nsp2122S122PTctCct11AY.4.20.000022
ORF1ab/nsp2122S122PTctCct11AY.4.30.000842
ORF1ab/nsp2122S122PTctCct11AY.460.000104
ORF1ab/nsp2122S122PTctCct11AY.90.000068
ORF1ab/nsp2122S122PTctCct11AY.910.00073
ORF1ab/nsp2122S122PTctCct11B.1.1.2630.001558
ORF1ab/nsp2122S122PTctCct11B.1.1.2730.006757
ORF1ab/nsp2122S122PTctCct11B.1.1.5250.005464
ORF1ab/nsp2122S122PTctCct11B.1.177.610.043478
ORF1ab/nsp2122S122PTctCct11B.1.20.000009
ORF1ab/nsp2122S122PTctCct11B.1.214.20.0006
ORF1ab/nsp2122S122PTctCct11B.1.2210.000071
ORF1ab/nsp2122S122PTctCct11B.1.3770.004566
ORF1ab/nsp2122S122PTctCct11B.1.6210.000089
ORF1ab/nsp2122S122PTctCct11B.500.111111
ORF1ab/nsp2122S122PTctCct11C.370.000116