CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 122

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2122S122FS302FnonsyntCttTt487248710.9997951169-1171
ORF1ab/nsp2122S122FS302FnonsyntCTtTC487210.0002052551169-1171
ORF1ab/nsp2122S122SS302SsyntcTtcC137313300.9686821169-1171
ORF1ab/nsp2122S122SS302SsyntcTtcG1373390.0284051169-1171
ORF1ab/nsp2122S122SS302SsyntcTtcA137330.0021851169-1171
ORF1ab/nsp2122S122SS302SsynTCTAGC137310.0007283321169-1171
ORF1ab/nsp2122S122PS302PnonsynTctCct2202180.9909091169-1171
ORF1ab/nsp2122S122PS302PnonsynTcTCcC22020.009090911169-1171
ORF1ab/nsp2122S122YS302YnonsyntCttAt636311169-1171
ORF1ab/nsp2122S122AS302AnonsynTctGct383811169-1171
ORF1ab/nsp2122S122delS302deldelTCT---313111169-1171
ORF1ab/nsp2122S122TS302TnonsynTctAct111111169-1171
ORF1ab/nsp2122S122CS302CnonsyntCttGt4411169-1171
ORF1ab/nsp2122S122del1S302del1deltCtt-t430.751169-1171
ORF1ab/nsp2122S122del1S302del1deltcTtc-410.251169-1171
ORF1ab/nsp2122S122HS302HnonsynTCtCAt2211169-1171
ORF1ab/nsp2122S122VS302VnonsynTCTGTG210.51169-1171
ORF1ab/nsp2122S122VS302VnonsynTCTGTC210.51169-1171
ORF1ab/nsp2122S122GS302GnonsynTCTGGG210.51169-1171
ORF1ab/nsp2122S122GS302GnonsynTCTGGC210.51169-1171
ORF1ab/nsp2122S122RS302RnonsynTCTAGG1111169-1171
ORF1ab/nsp2122S122IS302InonsynTCTATC1111169-1171
ORF1ab/nsp2122S122MS302MnonsynTCTATG1111169-1171
ORF1ab/nsp2122S122WS302WnonsyntCTtGG1111169-1171
ORF1ab/nsp2122S122DS302DnonsynTCtGAt1111169-1171

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2122S122FtCttTt48714872All0.000932
ORF1ab/nsp2122S122FtCTtTC14872All0
ORF1ab/nsp2122S122StcTtcC13301373All0.000254
ORF1ab/nsp2122S122StcTtcG391373All0.000007
ORF1ab/nsp2122S122StcTtcA31373All0.000001
ORF1ab/nsp2122S122STCTAGC11373All0
ORF1ab/nsp2122S122StcTtcC976976B.1.3750.8
ORF1ab/nsp2122S122FtCttTt724724B.1.1.70.000648
ORF1ab/nsp2122S122FtCttTt462462AY.40.000719
ORF1ab/nsp2122S122FtCttTt299299AY.1060.100134
ORF1ab/nsp2122S122FtCttTt290290AY.440.001765
ORF1ab/nsp2122S122PTctCct218220All0.000042
ORF1ab/nsp2122S122PTcTCcC2220All0
ORF1ab/nsp2122S122FtCttTt220220B.1.20.001937
ORF1ab/nsp2122S122FtCttTt201201B.1.360.029326
ORF1ab/nsp2122S122FtCttTt174174AY.430.000771
ORF1ab/nsp2122S122FtCttTt160160B.10.001466
ORF1ab/nsp2122S122FtCttTt157157B.1.1.10.05129
ORF1ab/nsp2122S122FtCttTt134134B.1.617.20.000505
ORF1ab/nsp2122S122FtCttTt113113B.1.10.00205
ORF1ab/nsp2122S122StcTtcC110110AY.470.003422
ORF1ab/nsp2122S122FtCttTt106106B.1.1770.001396
ORF1ab/nsp2122S122FtCttTt103103AY.1030.00064
ORF1ab/nsp2122S122FtCttTt9797AY.4.20.002104
ORF1ab/nsp2122S122FtCttTt9292AY.250.000553
ORF1ab/nsp2122S122FtCttTt8989AY.30.000885
ORF1ab/nsp2122S122FtCttTt8989AY.420.00358
ORF1ab/nsp2122S122FtCttTt6464P.10.001008
ORF1ab/nsp2122S122YtCttAt6363All0.000012
ORF1ab/nsp2122S122FtCttTt4848AY.240.02069
ORF1ab/nsp2122S122FtCttTt4848AY.5.30.016194
ORF1ab/nsp2122S122FtCttTt4646AY.360.006818
ORF1ab/nsp2122S122FtCttTt4545B.1.258.170.004679
ORF1ab/nsp2122S122FtCttTt4242B.1.5260.000987
ORF1ab/nsp2122S122FtCttTt4242B.1.5750.012743
ORF1ab/nsp2122S122StcTtcC4040AY.390.000988
ORF1ab/nsp2122S122ATctGct3838All0.000007
ORF1ab/nsp2122S122StcTtcG2634B.1.1770.000342
ORF1ab/nsp2122S122StcTtcC834B.1.1770.000105
ORF1ab/nsp2122S122FtCttTt3232AY.50.000661
ORF1ab/nsp2122S122delTCT---3131All0.000006
ORF1ab/nsp2122S122StcTtcC3131B.10.000284
ORF1ab/nsp2122S122PTctCct2930B.1.1.70.000026
ORF1ab/nsp2122S122PTcTCcC130B.1.1.70.000001
ORF1ab/nsp2122S122PTctCct2828AY.440.00017
ORF1ab/nsp2122S122FtCttTt2727AY.1020.000716
ORF1ab/nsp2122S122FtCttTt2727AY.9.10.002261
ORF1ab/nsp2122S122FtCttTt2525B.1.80.04931
ORF1ab/nsp2122S122StcTtcC2224AY.40.000034
ORF1ab/nsp2122S122StcTtcG224AY.40.000003
ORF1ab/nsp2122S122FtCttTt2323AY.99.20.00212
ORF1ab/nsp2122S122StcTtcC1823B.1.1.70.000016
ORF1ab/nsp2122S122StcTtcA323B.1.1.70.000003
ORF1ab/nsp2122S122StcTtcG223B.1.1.70.000002
ORF1ab/nsp2122S122StcTtcC2222AY.30.000219
ORF1ab/nsp2122S122FtCttTt2222AY.390.000544
ORF1ab/nsp2122S122StcTtcC1922AY.440.000116
ORF1ab/nsp2122S122StcTtcG222AY.440.000012
ORF1ab/nsp2122S122STCTAGC122AY.440.000006
ORF1ab/nsp2122S122FtCttTt2222B.1.1.500.014936
ORF1ab/nsp2122S122FtCttTt2222B.1.2580.001464
ORF1ab/nsp2122S122FtCttTt2020AY.260.000566
ORF1ab/nsp2122S122FtCttTt2020B.1.1600.000624
ORF1ab/nsp2122S122FtCttTt1919AY.290.0003
ORF1ab/nsp2122S122FtCttTt1818B.1.2210.001279
ORF1ab/nsp2122S122FtCttTt1818B.1.3200.022416
ORF1ab/nsp2122S122PTctCct1717AY.1030.000106
ORF1ab/nsp2122S122FtCttTt1717AY.200.000661
ORF1ab/nsp2122S122FtCttTt1717AY.230.001186
ORF1ab/nsp2122S122PTctCct1717B.1.1.2220.003468
ORF1ab/nsp2122S122FtCttTt1717B.1.5960.001481
ORF1ab/nsp2122S122FtCttTt1616AY.9.20.000588
ORF1ab/nsp2122S122FtCttTt1616B.1.4290.000376
ORF1ab/nsp2122S122FtCttTt1515AY.98.10.000726
ORF1ab/nsp2122S122PTctCct1414AY.30.000139
ORF1ab/nsp2122S122FtCttTt1414AY.39.1.10.010145
ORF1ab/nsp2122S122StcTtcC1414AY.430.000062
ORF1ab/nsp2122S122FtCttTt1414B.1.3510.000416
ORF1ab/nsp2122S122FtCttTt1414B.1.466.20.005477
ORF1ab/nsp2122S122FtCttTt1414B.1.5950.003653
ORF1ab/nsp2122S122FtCttTt1313B.1.1.5190.000516
ORF1ab/nsp2122S122FtCttTt1313B.1.177.80.009782
ORF1ab/nsp2122S122FtCttTt1212AY.350.002797
ORF1ab/nsp2122S122PTctCct1212AY.40.000019
ORF1ab/nsp2122S122FtCttTt1212AY.470.000373
ORF1ab/nsp2122S122FtCttTt1212B.1.438.10.001287
ORF1ab/nsp2122S122PTctCct1212B.1.6230.006438
ORF1ab/nsp2122S122FtCttTt1212P.1.140.000574
ORF1ab/nsp2122S122TTctAct1111All0.000002
ORF1ab/nsp2122S122FtCttTt1111AY.1200.000409
ORF1ab/nsp2122S122FtCttTt1111B.1.1.4860.01735
ORF1ab/nsp2122S122FtCttTt1111B.1.6370.000804
ORF1ab/nsp2122S122FtCttTt1010AY.1000.00046
ORF1ab/nsp2122S122FtCttTt1010AY.1130.001424
ORF1ab/nsp2122S122FtCttTt1010AY.5.40.002767
ORF1ab/nsp2122S122FtCttTt1010B.1.36.220.012077
ORF1ab/nsp2122S122YtCttAt99AY.250.000054
ORF1ab/nsp2122S122StcTtcC99B.1.351.50.005396
ORF1ab/nsp2122S122FtCttTt99B.1.4560.029412
ORF1ab/nsp2122S122StcTtcC89B.1.617.20.00003
ORF1ab/nsp2122S122StcTtcG19B.1.617.20.000004
ORF1ab/nsp2122S122FtCttTt88AY.330.000534
ORF1ab/nsp2122S122FtCttTt88AY.620.003486
ORF1ab/nsp2122S122FtCttTt88B.1.1.4170.021622
ORF1ab/nsp2122S122StcTtcC88B.1.2060.006525
ORF1ab/nsp2122S122FtCttTt88B.1.4250.023952
ORF1ab/nsp2122S122FtCttTt88B.1.4270.000404
ORF1ab/nsp2122S122PTctCct77B.1.10.000127
ORF1ab/nsp2122S122delTCT---77B.1.1.70.000006
ORF1ab/nsp2122S122FtCttTt77B.1.177.600.001529
ORF1ab/nsp2122S122FtCttTt77B.1.36.160.009972
ORF1ab/nsp2122S122FtCttTt77B.1.36.80.007
ORF1ab/nsp2122S122ATctGct77B.1.6210.00062
ORF1ab/nsp2122S122FtCttTt66AY.1190.000212
ORF1ab/nsp2122S122PTctCct66AY.250.000036
ORF1ab/nsp2122S122FtCttTt66AY.560.009631
ORF1ab/nsp2122S122FtCttTt66AY.750.000336
ORF1ab/nsp2122S122PTctCct66B.10.000055
ORF1ab/nsp2122S122FtCttTt66B.1.1.2970.013423
ORF1ab/nsp2122S122delTCT---66B.1.1.330.002525
ORF1ab/nsp2122S122PTctCct66B.1.1600.000187
ORF1ab/nsp2122S122FtCttTt66B.1.2430.000418
ORF1ab/nsp2122S122PTctCct66B.1.2700.033708
ORF1ab/nsp2122S122YtCttAt66B.1.617.20.000023
ORF1ab/nsp2122S122YtCttAt55AY.1020.000133
ORF1ab/nsp2122S122FtCttTt55AY.520.004072
ORF1ab/nsp2122S122YtCttAt55AY.9.10.000419
ORF1ab/nsp2122S122FtCttTt45AY.980.000316
ORF1ab/nsp2122S122FtCTtTC15AY.980.000079
ORF1ab/nsp2122S122FtCttTt55B0.000639
ORF1ab/nsp2122S122FtCttTt55B.1.110.30.003592
ORF1ab/nsp2122S122FtCttTt55B.1.177.540.003032
ORF1ab/nsp2122S122PTctCct55B.1.177.810.000947
ORF1ab/nsp2122S122FtCttTt55B.1.2340.00066
ORF1ab/nsp2122S122FtCttTt55B.1.3560.008636
ORF1ab/nsp2122S122PTctCct55B.1.617.20.000019
ORF1ab/nsp2122S122FtCttTt55B.1.6210.000443
ORF1ab/nsp2122S122FtCttTt55P.1.120.00242
ORF1ab/nsp2122S122CtCttGt44All0.000001
ORF1ab/nsp2122S122del1tCtt-t34All0.000001
ORF1ab/nsp2122S122del1tcTtc-14All0
ORF1ab/nsp2122S122FtCttTt44AU.10.005063
ORF1ab/nsp2122S122FtCttTt44AY.1170.000338
ORF1ab/nsp2122S122FtCttTt44AY.130.000644
ORF1ab/nsp2122S122FtCttTt44AY.39.10.000158
ORF1ab/nsp2122S122ATctGct44AY.40.000006
ORF1ab/nsp2122S122FtCttTt44AY.460.000416
ORF1ab/nsp2122S122FtCttTt44AY.610.000419
ORF1ab/nsp2122S122StcTtcC44B.1.1.3060.001754
ORF1ab/nsp2122S122FtCttTt44B.1.1.3370.014388
ORF1ab/nsp2122S122YtCttAt44B.1.1.70.000004
ORF1ab/nsp2122S122PTctCct44B.1.1770.000053
ORF1ab/nsp2122S122FtCttTt44B.1.177.250.059701
ORF1ab/nsp2122S122FtCttTt44B.1.177.570.001124
ORF1ab/nsp2122S122FtCttTt44B.1.177.730.002265
ORF1ab/nsp2122S122FtCttTt44B.1.2400.000862
ORF1ab/nsp2122S122StcTtcC44B.1.3670.00317
ORF1ab/nsp2122S122FtCttTt44B.1.5240.005626
ORF1ab/nsp2122S122ATctGct44B.1.6120.01061
ORF1ab/nsp2122S122FtCttTt44P.1.60.007782
ORF1ab/nsp2122S122FtCttTt44P.1.70.001277
ORF1ab/nsp2122S122FtCttTt33A0.001161
ORF1ab/nsp2122S122FtCttTt33AY.16.10.00141
ORF1ab/nsp2122S122FtCttTt33AY.380.001498
ORF1ab/nsp2122S122TTctAct33AY.40.000005
ORF1ab/nsp2122S122FtCttTt33AY.4.2.10.000447
ORF1ab/nsp2122S122FtCttTt33AY.540.000286
ORF1ab/nsp2122S122ATctGct33AY.7.20.001678
ORF1ab/nsp2122S122FtCttTt33AY.730.001996
ORF1ab/nsp2122S122ATctGct33AY.90.000203
ORF1ab/nsp2122S122YtCttAt33B.10.000027
ORF1ab/nsp2122S122YtCttAt33B.1.10.000054
ORF1ab/nsp2122S122StcTtcC33B.1.10.000054
ORF1ab/nsp2122S122FtCttTt33B.1.1.2220.000612
ORF1ab/nsp2122S122FtCttTt33B.1.1.280.000934
ORF1ab/nsp2122S122FtCttTt33B.1.1.3060.001315
ORF1ab/nsp2122S122FtCttTt33B.1.1.330.001263
ORF1ab/nsp2122S122delTCT---33B.1.1.3480.002389
ORF1ab/nsp2122S122FtCttTt33B.1.214.20.001799
ORF1ab/nsp2122S122FtCttTt33B.1.3290.001823
ORF1ab/nsp2122S122FtCttTt33B.1.3490.002144
ORF1ab/nsp2122S122PTctCct33B.1.36.70.012
ORF1ab/nsp2122S122FtCttTt33B.1.3690.000856
ORF1ab/nsp2122S122FtCttTt33B.1.3950.021127
ORF1ab/nsp2122S122PTctCct33B.1.4090.002344
ORF1ab/nsp2122S122FtCttTt33B.1.4700.004213
ORF1ab/nsp2122S122StcTtcC33B.1.5250.000339
ORF1ab/nsp2122S122YtCttAt33B.1.6090.001438
ORF1ab/nsp2122S122FtCttTt33B.1.617.10.000387
ORF1ab/nsp2122S122ATctGct33B.1.617.20.000011
ORF1ab/nsp2122S122PTctCct33C.170.166667
ORF1ab/nsp2122S122FtCttTt33C.370.000348
ORF1ab/nsp2122S122PTctCct33P.10.000047
ORF1ab/nsp2122S122FtCttTt33R.10.00027
ORF1ab/nsp2122S122CtCttGt220.111111
ORF1ab/nsp2122S122delTCT---220.111111
ORF1ab/nsp2122S122FtCttTt22A.20.001324
ORF1ab/nsp2122S122FtCttTt22A.2.50.000998
ORF1ab/nsp2122S122HTCtCAt22All0
ORF1ab/nsp2122S122VTCTGTG12All0
ORF1ab/nsp2122S122GTCTGGC12All0
ORF1ab/nsp2122S122VTCTGTC12All0
ORF1ab/nsp2122S122GTCTGGG12All0
ORF1ab/nsp2122S122YtCttAt22AY.1000.000092
ORF1ab/nsp2122S122PTctCct22AY.1000.000092
ORF1ab/nsp2122S122PTctCct22AY.1020.000053
ORF1ab/nsp2122S122TTctAct22AY.1130.000285
ORF1ab/nsp2122S122YtCttAt22AY.1170.000169
ORF1ab/nsp2122S122PTctCct22AY.1170.000169
ORF1ab/nsp2122S122FtCttTt22AY.1180.000125
ORF1ab/nsp2122S122StcTtcG12AY.130.000161
ORF1ab/nsp2122S122StcTtcC12AY.130.000161
ORF1ab/nsp2122S122StcTtcC22AY.250.000012
ORF1ab/nsp2122S122TTctAct22AY.250.000012
ORF1ab/nsp2122S122FtCttTt22AY.270.000129
ORF1ab/nsp2122S122FtCttTt22AY.3.10.000171
ORF1ab/nsp2122S122YtCttAt22AY.40.000003
ORF1ab/nsp2122S122StcTtcC22AY.4.20.000043
ORF1ab/nsp2122S122FtCttTt22AY.4.50.000215
ORF1ab/nsp2122S122GTCTGGC12AY.440.000006
ORF1ab/nsp2122S122VTCTGTC12AY.440.000006
ORF1ab/nsp2122S122VTCTGTG12AY.440.000006
ORF1ab/nsp2122S122GTCTGGG12AY.440.000006
ORF1ab/nsp2122S122FtCttTt22AY.46.20.001271
ORF1ab/nsp2122S122YtCttAt22AY.46.40.000329
ORF1ab/nsp2122S122FtCttTt22AY.46.60.000144
ORF1ab/nsp2122S122ATctGct22AY.50.000041
ORF1ab/nsp2122S122FtCttTt22AY.550.001835
ORF1ab/nsp2122S122FtCttTt22AY.60.000082
ORF1ab/nsp2122S122FtCttTt22AY.680.000547
ORF1ab/nsp2122S122FtCttTt22AY.710.00095
ORF1ab/nsp2122S122YtCttAt22AY.790.002421
ORF1ab/nsp2122S122PTctCct22AY.850.000854
ORF1ab/nsp2122S122FtCttTt22AY.860.00166
ORF1ab/nsp2122S122FtCttTt22B.1.1.100.00223
ORF1ab/nsp2122S122ATctGct22B.1.1.2160.001781
ORF1ab/nsp2122S122FtCttTt22B.1.1.250.001137
ORF1ab/nsp2122S122StcTtcC22B.1.1.2840.000215
ORF1ab/nsp2122S122FtCttTt22B.1.1.3010.002358
ORF1ab/nsp2122S122FtCttTt22B.1.1.3180.000604
ORF1ab/nsp2122S122ATctGct22B.1.1.5190.000079
ORF1ab/nsp2122S122TTctAct22B.1.1.70.000002
ORF1ab/nsp2122S122FtCttTt22B.1.1060.0625
ORF1ab/nsp2122S122FtCttTt22B.1.177.160.001329
ORF1ab/nsp2122S122FtCttTt22B.1.177.310.022989
ORF1ab/nsp2122S122FtCttTt22B.1.177.520.003515
ORF1ab/nsp2122S122StcTtcC22B.1.20.000018
ORF1ab/nsp2122S122PTctCct22B.1.2390.002442
ORF1ab/nsp2122S122YtCttAt22B.1.2580.000133
ORF1ab/nsp2122S122FtCttTt22B.1.351.30.001753
ORF1ab/nsp2122S122FtCttTt22B.1.36.170.000988
ORF1ab/nsp2122S122FtCttTt22B.1.3980.005952
ORF1ab/nsp2122S122FtCttTt22B.1.4000.000858
ORF1ab/nsp2122S122FtCttTt22B.1.4030.006536
ORF1ab/nsp2122S122delTCT---22B.1.4290.000047
ORF1ab/nsp2122S122FtCttTt22B.1.4590.008163
ORF1ab/nsp2122S122FtCttTt22B.1.4680.011429
ORF1ab/nsp2122S122StcTtcC22B.1.5260.000047
ORF1ab/nsp2122S122FtCttTt22B.1.6090.000959
ORF1ab/nsp2122S122delTCT---22B.1.617.20.000008
ORF1ab/nsp2122S122StcTtcC22B.1.6370.000146
ORF1ab/nsp2122S122FtCttTt22B.610.011494
ORF1ab/nsp2122S122FtCttTt22C.360.001821
ORF1ab/nsp2122S122PTctCct22C.360.001821
ORF1ab/nsp2122S122delTCT---22N.60.014184
ORF1ab/nsp2122S122PTctCct22P.1.140.000096
ORF1ab/nsp2122S122FtCttTt22P.1.150.000465
ORF1ab/nsp2122S122StcTtcC22P.1.170.000324
ORF1ab/nsp2122S122FtCttTt22P.20.000373
ORF1ab/nsp2122S122delTCT---22P.20.000373
ORF1ab/nsp2122S122FtCttTt22P.40.007605
ORF1ab/nsp2122S122FtCttTt22Q.10.000253
ORF1ab/nsp2122S122StcTtcC11A0.000387
ORF1ab/nsp2122S122FtCttTt11A.2.5.30.010309
ORF1ab/nsp2122S122FtCttTt11A.23.10.000704
ORF1ab/nsp2122S122FtCttTt11AE.80.000489
ORF1ab/nsp2122S122ITCTATC11All0
ORF1ab/nsp2122S122RTCTAGG11All0
ORF1ab/nsp2122S122MTCTATG11All0
ORF1ab/nsp2122S122WtCTtGG11All0
ORF1ab/nsp2122S122DTCtGAt11All0
ORF1ab/nsp2122S122StcTtcC11AY.1020.000027
ORF1ab/nsp2122S122YtCttAt11AY.1030.000006
ORF1ab/nsp2122S122StcTtcG11AY.1030.000006
ORF1ab/nsp2122S122ATctGct11AY.1030.000006
ORF1ab/nsp2122S122FtCttTt11AY.1050.000643
ORF1ab/nsp2122S122FtCttTt11AY.1110.000183
ORF1ab/nsp2122S122FtCttTt11AY.1160.000287
ORF1ab/nsp2122S122ATctGct11AY.1190.000035
ORF1ab/nsp2122S122StcTtcC11AY.1190.000035
ORF1ab/nsp2122S122PTctCct11AY.1200.000037
ORF1ab/nsp2122S122FtCttTt11AY.140.000088
ORF1ab/nsp2122S122PTctCct11AY.16.10.00047
ORF1ab/nsp2122S122FtCttTt11AY.190.00114
ORF1ab/nsp2122S122StcTtcG11AY.200.000039
ORF1ab/nsp2122S122YtCttAt11AY.200.000039
ORF1ab/nsp2122S122YtCttAt11AY.230.00007
ORF1ab/nsp2122S122ATctGct11AY.230.00007
ORF1ab/nsp2122S122YtCttAt11AY.260.000028
ORF1ab/nsp2122S122StcTtcC11AY.260.000028
ORF1ab/nsp2122S122StcTtcC11AY.290.000016
ORF1ab/nsp2122S122ATctGct11AY.290.000016
ORF1ab/nsp2122S122YtCttAt11AY.30.00001
ORF1ab/nsp2122S122TTctAct11AY.320.000532
ORF1ab/nsp2122S122FtCttTt11AY.340.000097
ORF1ab/nsp2122S122ATctGct11AY.360.000148
ORF1ab/nsp2122S122FtCttTt11AY.370.000316
ORF1ab/nsp2122S122delTCT---11AY.390.000025
ORF1ab/nsp2122S122YtCttAt11AY.390.000025
ORF1ab/nsp2122S122PTctCct11AY.4.20.000022
ORF1ab/nsp2122S122PTctCct11AY.4.30.000842
ORF1ab/nsp2122S122CtCttGt11AY.430.000004
ORF1ab/nsp2122S122YtCttAt11AY.430.000004
ORF1ab/nsp2122S122RTCTAGG11AY.440.000006
ORF1ab/nsp2122S122ITCTATC11AY.440.000006
ORF1ab/nsp2122S122MTCTATG11AY.440.000006
ORF1ab/nsp2122S122YtCttAt11AY.440.000006
ORF1ab/nsp2122S122PTctCct11AY.460.000104
ORF1ab/nsp2122S122FtCttTt11AY.46.10.001027
ORF1ab/nsp2122S122FtCttTt11AY.46.40.000165
ORF1ab/nsp2122S122FtCttTt11AY.480.000465
ORF1ab/nsp2122S122StcTtcC11AY.50.000021
ORF1ab/nsp2122S122FtCttTt11AY.580.000907
ORF1ab/nsp2122S122delTCT---11AY.620.000436
ORF1ab/nsp2122S122FtCttTt11AY.650.000533
ORF1ab/nsp2122S122FtCttTt11AY.670.000464
ORF1ab/nsp2122S122StcTtcC11AY.670.000464
ORF1ab/nsp2122S122ATctGct11AY.690.000187
ORF1ab/nsp2122S122FtCttTt11AY.690.000187
ORF1ab/nsp2122S122StcTtcC11AY.7.20.000559
ORF1ab/nsp2122S122delTCT---11AY.710.000475
ORF1ab/nsp2122S122FtCttTt11AY.740.000116
ORF1ab/nsp2122S122FtCttTt11AY.75.10.00018
ORF1ab/nsp2122S122FtCttTt11AY.80.000606
ORF1ab/nsp2122S122FtCttTt11AY.840.000437
ORF1ab/nsp2122S122HTCtCAt11AY.840.000437
ORF1ab/nsp2122S122FtCttTt11AY.850.000427
ORF1ab/nsp2122S122PTctCct11AY.90.000068
ORF1ab/nsp2122S122FtCttTt11AY.90.000068
ORF1ab/nsp2122S122StcTtcC11AY.9.10.000084
ORF1ab/nsp2122S122StcTtcC11AY.910.00073
ORF1ab/nsp2122S122PTctCct11AY.910.00073
ORF1ab/nsp2122S122FtCttTt11AY.920.000287
ORF1ab/nsp2122S122FtCttTt11AY.940.000443
ORF1ab/nsp2122S122HTCtCAt11AY.990.001049
ORF1ab/nsp2122S122CtCttGt11B.10.000009
ORF1ab/nsp2122S122del1tCtt-t11B.10.000009
ORF1ab/nsp2122S122FtCttTt11B.1.1.1170.009709
ORF1ab/nsp2122S122FtCttTt11B.1.1.1480.008772
ORF1ab/nsp2122S122FtCttTt11B.1.1.1570.000913
ORF1ab/nsp2122S122FtCttTt11B.1.1.1760.000439
ORF1ab/nsp2122S122FtCttTt11B.1.1.1980.001468
ORF1ab/nsp2122S122FtCttTt11B.1.1.2140.000055
ORF1ab/nsp2122S122FtCttTt11B.1.1.2200.001859
ORF1ab/nsp2122S122StcTtcG11B.1.1.2270.004348
ORF1ab/nsp2122S122PTctCct11B.1.1.2630.001558
ORF1ab/nsp2122S122FtCttTt11B.1.1.2650.003155
ORF1ab/nsp2122S122PTctCct11B.1.1.2730.006757
ORF1ab/nsp2122S122FtCttTt11B.1.1.2800.003086
ORF1ab/nsp2122S122FtCttTt11B.1.1.2840.000107
ORF1ab/nsp2122S122FtCttTt11B.1.1.2890.002083
ORF1ab/nsp2122S122FtCttTt11B.1.1.2940.001266
ORF1ab/nsp2122S122PTcTCcC11B.1.1.3060.000438
ORF1ab/nsp2122S122FtCttTt11B.1.1.310.066667
ORF1ab/nsp2122S122FtCttTt11B.1.1.3170.000412
ORF1ab/nsp2122S122FtCttTt11B.1.1.3220.008772
ORF1ab/nsp2122S122FtCttTt11B.1.1.3260.001761
ORF1ab/nsp2122S122FtCttTt11B.1.1.3740.002375
ORF1ab/nsp2122S122FtCttTt11B.1.1.390.00051
ORF1ab/nsp2122S122FtCttTt11B.1.1.3970.002252
ORF1ab/nsp2122S122FtCttTt11B.1.1.5170.006803
ORF1ab/nsp2122S122FtCttTt11B.1.1.5250.005464
ORF1ab/nsp2122S122PTctCct11B.1.1.5250.005464
ORF1ab/nsp2122S122FtCttTt11B.1.1.5260.003546
ORF1ab/nsp2122S122FtCttTt11B.1.1.630.000386
ORF1ab/nsp2122S122FtCttTt11B.1.1.740.00431
ORF1ab/nsp2122S122ATctGct11B.1.1280.000635
ORF1ab/nsp2122S122FtCttTt11B.1.160.160.000929
ORF1ab/nsp2122S122FtCttTt11B.1.160.310.008065
ORF1ab/nsp2122S122YtCttAt11B.1.1770.000013
ORF1ab/nsp2122S122FtCttTt11B.1.177.100.000878
ORF1ab/nsp2122S122FtCttTt11B.1.177.120.000152
ORF1ab/nsp2122S122FtCttTt11B.1.177.20.004545
ORF1ab/nsp2122S122FtCttTt11B.1.177.350.000691
ORF1ab/nsp2122S122FtCttTt11B.1.177.60.000977
ORF1ab/nsp2122S122PTctCct11B.1.177.610.043478
ORF1ab/nsp2122S122FtCttTt11B.1.177.630.002703
ORF1ab/nsp2122S122FtCttTt11B.1.177.650.000665
ORF1ab/nsp2122S122delTCT---11B.1.177.70.000165
ORF1ab/nsp2122S122FtCttTt11B.1.177.810.000189
ORF1ab/nsp2122S122FtCttTt11B.1.177.90.001332
ORF1ab/nsp2122S122del1tcTtc-11B.1.20.000009
ORF1ab/nsp2122S122TTctAct11B.1.20.000009
ORF1ab/nsp2122S122PTctCct11B.1.20.000009
ORF1ab/nsp2122S122del1tCtt-t11B.1.2100.002132
ORF1ab/nsp2122S122PTctCct11B.1.214.20.0006
ORF1ab/nsp2122S122FtCttTt11B.1.214.30.007143
ORF1ab/nsp2122S122PTctCct11B.1.2210.000071
ORF1ab/nsp2122S122YtCttAt11B.1.2210.000071
ORF1ab/nsp2122S122FtCttTt11B.1.2240.025
ORF1ab/nsp2122S122FtCttTt11B.1.2370.004975
ORF1ab/nsp2122S122FtCttTt11B.1.2390.001221
ORF1ab/nsp2122S122StcTtcC11B.1.2400.000216
ORF1ab/nsp2122S122FtCttTt11B.1.2470.014925
ORF1ab/nsp2122S122del1tCtt-t11B.1.2470.014925
ORF1ab/nsp2122S122FtCttTt11B.1.258.110.000396
ORF1ab/nsp2122S122YtCttAt11B.1.258.170.000104
ORF1ab/nsp2122S122FtCttTt11B.1.3110.000275
ORF1ab/nsp2122S122FtCttTt11B.1.3360.002439
ORF1ab/nsp2122S122FtCttTt11B.1.3380.008621
ORF1ab/nsp2122S122FtCttTt11B.1.351.20.000303
ORF1ab/nsp2122S122FtCttTt11B.1.36.100.004785
ORF1ab/nsp2122S122FtCttTt11B.1.36.260.002857
ORF1ab/nsp2122S122FtCttTt11B.1.36.290.000517
ORF1ab/nsp2122S122FtCttTt11B.1.36.360.000602
ORF1ab/nsp2122S122FtCttTt11B.1.3670.000792
ORF1ab/nsp2122S122StcTtcC11B.1.3690.000285
ORF1ab/nsp2122S122PTctCct11B.1.3770.004566
ORF1ab/nsp2122S122FtCttTt11B.1.3790.017241
ORF1ab/nsp2122S122StcTtcC11B.1.3820.008929
ORF1ab/nsp2122S122StcTtcC11B.1.3960.000706
ORF1ab/nsp2122S122FtCttTt11B.1.3960.000706
ORF1ab/nsp2122S122FtCttTt11B.1.4040.001302
ORF1ab/nsp2122S122FtCttTt11B.1.416.10.001563
ORF1ab/nsp2122S122StcTtcC11B.1.4270.00005
ORF1ab/nsp2122S122FtCttTt11B.1.4360.001029
ORF1ab/nsp2122S122FtCttTt11B.1.440.008333
ORF1ab/nsp2122S122FtCttTt11B.1.4420.035714
ORF1ab/nsp2122S122FtCttTt11B.1.4530.003236
ORF1ab/nsp2122S122ATctGct11B.1.466.20.000391
ORF1ab/nsp2122S122FtCttTt11B.1.4690.00361
ORF1ab/nsp2122S122FtCttTt11B.1.5250.000113
ORF1ab/nsp2122S122FtCttTt11B.1.5330.009615
ORF1ab/nsp2122S122FtCttTt11B.1.5460.003704
ORF1ab/nsp2122S122FtCttTt11B.1.5560.007519
ORF1ab/nsp2122S122FtCttTt11B.1.5700.002941
ORF1ab/nsp2122S122FtCttTt11B.1.5760.000907
ORF1ab/nsp2122S122FtCttTt11B.1.5820.000491
ORF1ab/nsp2122S122FtCttTt11B.1.6120.002653
ORF1ab/nsp2122S122YtCttAt11B.1.617.10.000129
ORF1ab/nsp2122S122DTCtGAt11B.1.617.20.000004
ORF1ab/nsp2122S122WtCTtGG11B.1.617.20.000004
ORF1ab/nsp2122S122PTctCct11B.1.6210.000089
ORF1ab/nsp2122S122FtCttTt11B.1.6250.002353
ORF1ab/nsp2122S122FtCttTt11B.1.6280.000352
ORF1ab/nsp2122S122FtCttTt11B.1.6290.013333
ORF1ab/nsp2122S122StcTtcG11B.310.003731
ORF1ab/nsp2122S122FtCttTt11B.4.60.016667
ORF1ab/nsp2122S122StcTtcC11B.400.000364
ORF1ab/nsp2122S122PTctCct11B.500.111111
ORF1ab/nsp2122S122PTctCct11C.370.000116
ORF1ab/nsp2122S122FtCttTt11D.20.000075
ORF1ab/nsp2122S122delTCT---11N.40.004255
ORF1ab/nsp2122S122FtCttTt11P.1.170.000162
ORF1ab/nsp2122S122FtCttTt11Q.30.000145
ORF1ab/nsp2122S122FtCttTt11Q.40.000455
ORF1ab/nsp2122S122FtCttTt11Q.80.000165
ORF1ab/nsp2122S122StcTtcG11Q.80.000165
ORF1ab/nsp2122S122YtCttAt11Q.80.000165
ORF1ab/nsp2122S122FtCttTt11U.10.012821
ORF1ab/nsp2122S122FtCttTt11W.10.008696