CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 117 & Codon = atT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2117M117IM297InonsynatGatT10512930.2787821154-1156

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2117M117IatGatT2931051All0.000056
ORF1ab/nsp2117M117IatGatT3377B.1.1.70.00003
ORF1ab/nsp2117M117IatGatT7777D.50.383085
ORF1ab/nsp2117M117IatGatT4251AY.1030.000261
ORF1ab/nsp2117M117IatGatT3838B.1.1600.001185
ORF1ab/nsp2117M117IatGatT1122AY.40.000017
ORF1ab/nsp2117M117IatGatT616AY.430.000027
ORF1ab/nsp2117M117IatGatT1212B.1.2790.006163
ORF1ab/nsp2117M117IatGatT110AY.250.000006
ORF1ab/nsp2117M117IatGatT88B.1.177.860.001468
ORF1ab/nsp2117M117IatGatT88P.20.001493
ORF1ab/nsp2117M117IatGatT77B.1.20.000062
ORF1ab/nsp2117M117IatGatT77B.1.258.170.000728
ORF1ab/nsp2117M117IatGatT46B.10.000037
ORF1ab/nsp2117M117IatGatT55B.1.1.2910.003712
ORF1ab/nsp2117M117IatGatT15B.1.617.20.000004
ORF1ab/nsp2117M117IatGatT14AY.440.000006
ORF1ab/nsp2117M117IatGatT34B.1.10.000054
ORF1ab/nsp2117M117IatGatT13AY.230.00007
ORF1ab/nsp2117M117IatGatT33AY.610.000314
ORF1ab/nsp2117M117IatGatT22AY.320.001065
ORF1ab/nsp2117M117IatGatT12AY.750.000056
ORF1ab/nsp2117M117IatGatT22B.1.3690.00057
ORF1ab/nsp2117M117IatGatT22B.1.617.10.000258
ORF1ab/nsp2117M117IatGatT22N.50.003534
ORF1ab/nsp2117M117IatGatT11AY.1000.000046
ORF1ab/nsp2117M117IatGatT11AY.1020.000027
ORF1ab/nsp2117M117IatGatT11AY.420.00004
ORF1ab/nsp2117M117IatGatT11AY.470.000031
ORF1ab/nsp2117M117IatGatT11AY.50.000021
ORF1ab/nsp2117M117IatGatT11AY.540.000095
ORF1ab/nsp2117M117IatGatT11AY.9.10.000084
ORF1ab/nsp2117M117IatGatT11B.1.1.2070.001182
ORF1ab/nsp2117M117IatGatT11B.1.1.3350.012987
ORF1ab/nsp2117M117IatGatT11B.1.160.90.007194
ORF1ab/nsp2117M117IatGatT11B.1.2060.000816
ORF1ab/nsp2117M117IatGatT11B.1.4290.000024
ORF1ab/nsp2117M117IatGatT11B.1.5260.000024
ORF1ab/nsp2117M117IatGatT11B.450.003831
ORF1ab/nsp2117M117IatGatT11P.10.000016
ORF1ab/nsp2117M117IatGatT11P.1.170.000162