CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 101 & Codon = aCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2101I101TI281TnonsynaTcaCc3203180.993751106-1108

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2101I101TaTcaCc318320All0.000061
ORF1ab/nsp2101I101TaTcaCc9797B.1.1.70.000087
ORF1ab/nsp2101I101TaTcaCc3232AY.430.000142
ORF1ab/nsp2101I101TaTcaCc1515AY.4.20.000325
ORF1ab/nsp2101I101TaTcaCc1414B.1.617.20.000053
ORF1ab/nsp2101I101TaTcaCc1212P.10.000189
ORF1ab/nsp2101I101TaTcaCc1111AY.250.000066
ORF1ab/nsp2101I101TaTcaCc1010B.1.1.3700.126582
ORF1ab/nsp2101I101TaTcaCc99AY.40.000014
ORF1ab/nsp2101I101TaTcaCc88B.1.10.000145
ORF1ab/nsp2101I101TaTcaCc77AY.330.000467
ORF1ab/nsp2101I101TaTcaCc77B.1.1770.000092
ORF1ab/nsp2101I101TaTcaCc66AY.260.00017
ORF1ab/nsp2101I101TaTcaCc55AY.1030.000031
ORF1ab/nsp2101I101TaTcaCc55AY.440.00003
ORF1ab/nsp2101I101TaTcaCc44AY.1020.000106
ORF1ab/nsp2101I101TaTcaCc44AY.30.00004
ORF1ab/nsp2101I101TaTcaCc44AY.9.20.000147
ORF1ab/nsp2101I101TaTcaCc33AY.1210.000406
ORF1ab/nsp2101I101TaTcaCc33B.1.1.4160.002715
ORF1ab/nsp2101I101TaTcaCc33B.1.177.440.001557
ORF1ab/nsp2101I101TaTcaCc33B.1.5260.000071
ORF1ab/nsp2101I101TaTcaCc33C.36.30.001702
ORF1ab/nsp2101I101TaTcaCc22AY.160.000759
ORF1ab/nsp2101I101TaTcaCc22AY.290.000032
ORF1ab/nsp2101I101TaTcaCc22AY.29.10.000441
ORF1ab/nsp2101I101TaTcaCc22AY.390.000049
ORF1ab/nsp2101I101TaTcaCc22AY.790.002421
ORF1ab/nsp2101I101TaTcaCc22B.10.000018
ORF1ab/nsp2101I101TaTcaCc22B.1.177.80.001505
ORF1ab/nsp2101I101TaTcaCc22B.1.2580.000133
ORF1ab/nsp2101I101TaTcaCc22B.1.4090.001563
ORF1ab/nsp2101I101TaTcaCc22B.1.438.10.000215
ORF1ab/nsp2101I101TaTcaCc22B.1.6210.000177
ORF1ab/nsp2101I101TaTcaCc22P.1.140.000096
ORF1ab/nsp2101I101TaTcaCc11AY.1160.000287
ORF1ab/nsp2101I101TaTcaCc11AY.1190.000035
ORF1ab/nsp2101I101TaTcaCc11AY.16.10.00047
ORF1ab/nsp2101I101TaTcaCc11AY.200.000039
ORF1ab/nsp2101I101TaTcaCc11AY.420.00004
ORF1ab/nsp2101I101TaTcaCc11AY.46.40.000165
ORF1ab/nsp2101I101TaTcaCc11AY.470.000031
ORF1ab/nsp2101I101TaTcaCc11AY.5.40.000277
ORF1ab/nsp2101I101TaTcaCc11AY.690.000187
ORF1ab/nsp2101I101TaTcaCc11AY.750.000056
ORF1ab/nsp2101I101TaTcaCc11AY.90.000068
ORF1ab/nsp2101I101TaTcaCc11AY.99.10.001553
ORF1ab/nsp2101I101TaTcaCc11B.1.1.1410.002012
ORF1ab/nsp2101I101TaTcaCc11B.1.1.2140.000055
ORF1ab/nsp2101I101TaTcaCc11B.1.1.2430.004082
ORF1ab/nsp2101I101TaTcaCc11B.1.1.280.000311
ORF1ab/nsp2101I101TaTcaCc11B.1.1.4340.000349
ORF1ab/nsp2101I101TaTcaCc11B.1.1.5230.001563
ORF1ab/nsp2101I101TaTcaCc11B.1.1.700.000341
ORF1ab/nsp2101I101TaTcaCc11B.1.177.570.000281
ORF1ab/nsp2101I101TaTcaCc11B.1.177.730.000566
ORF1ab/nsp2101I101TaTcaCc11B.1.20.000009
ORF1ab/nsp2101I101TaTcaCc11B.1.2400.000216
ORF1ab/nsp2101I101TaTcaCc11B.1.2430.00007
ORF1ab/nsp2101I101TaTcaCc11B.1.258.170.000104
ORF1ab/nsp2101I101TaTcaCc11B.1.351.30.000876
ORF1ab/nsp2101I101TaTcaCc11B.1.36.80.001
ORF1ab/nsp2101I101TaTcaCc11B.1.4740.001901
ORF1ab/nsp2101I101TaTcaCc11P.1.120.000484