CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : CodonNum = 1 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp21A1AA181AsyngcAgcT13827430.537627806-808

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp21A1AgcAgcT7431382All0.000142
ORF1ab/nsp21A1AgcAgcT537543AY.250.00323
ORF1ab/nsp21A1AgcAgcT31228B.1.1.70.000028
ORF1ab/nsp21A1AgcAgcT2755AY.40.000042
ORF1ab/nsp21A1AgcAgcT632AY.1030.000037
ORF1ab/nsp21A1AgcAgcT1226B.1.617.20.000045
ORF1ab/nsp21A1AgcAgcT1124AY.30.000109
ORF1ab/nsp21A1AgcAgcT1019AD.20.00219
ORF1ab/nsp21A1AgcAgcT1316B.10.000119
ORF1ab/nsp21A1AgcAgcT1313B.1.1340.071038
ORF1ab/nsp21A1AgcAgcT211AY.1020.000053
ORF1ab/nsp21A1AgcAgcT211AY.430.000009
ORF1ab/nsp21A1AgcAgcT811B.1.1770.000105
ORF1ab/nsp21A1AgcAgcT611B.1.20.000053
ORF1ab/nsp21A1AgcAgcT19AY.450.000122
ORF1ab/nsp21A1AgcAgcT17AY.440.000006
ORF1ab/nsp21A1AgcAgcT56AY.1130.000712
ORF1ab/nsp21A1AgcAgcT46B.1.10.000073
ORF1ab/nsp21A1AgcAgcT16B.1.2210.000071
ORF1ab/nsp21A1AgcAgcT15AY.1000.000046
ORF1ab/nsp21A1AgcAgcT55B.1.177.210.000382
ORF1ab/nsp21A1AgcAgcT55B.1.5960.000436
ORF1ab/nsp21A1AgcAgcT44AY.750.000224
ORF1ab/nsp21A1AgcAgcT44Q.30.00058
ORF1ab/nsp21A1AgcAgcT13AY.230.00007
ORF1ab/nsp21A1AgcAgcT13AY.3.10.000085
ORF1ab/nsp21A1AgcAgcT33AY.470.000093
ORF1ab/nsp21A1AgcAgcT33B.1.1.2790.003363
ORF1ab/nsp21A1AgcAgcT22A0.000774
ORF1ab/nsp21A1AgcAgcT12AY.50.000021
ORF1ab/nsp21A1AgcAgcT12AY.98.10.000048
ORF1ab/nsp21A1AgcAgcT22B.1.1.330.000842
ORF1ab/nsp21A1AgcAgcT22B.1.3690.00057
ORF1ab/nsp21A1AgcAgcT12P.1.70.000319
ORF1ab/nsp21A1AgcAgcT22R.10.00018
ORF1ab/nsp21A1AgcAgcT11AY.110.001339
ORF1ab/nsp21A1AgcAgcT11AY.1160.000287
ORF1ab/nsp21A1AgcAgcT11AY.1200.000037
ORF1ab/nsp21A1AgcAgcT11AY.260.000028
ORF1ab/nsp21A1AgcAgcT11AY.460.000104
ORF1ab/nsp21A1AgcAgcT11AY.46.30.000934
ORF1ab/nsp21A1AgcAgcT11AY.46.40.000165
ORF1ab/nsp21A1AgcAgcT11AY.46.60.000072
ORF1ab/nsp21A1AgcAgcT11AY.480.000465
ORF1ab/nsp21A1AgcAgcT11B.1.1.4200.001006
ORF1ab/nsp21A1AgcAgcT11B.1.177.830.001481
ORF1ab/nsp21A1AgcAgcT11B.1.2340.000132
ORF1ab/nsp21A1AgcAgcT11B.1.2650.001271
ORF1ab/nsp21A1AgcAgcT11B.1.4950.009091
ORF1ab/nsp21A1AgcAgcT11B.230.002924