CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Y47D

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1647Y47DY6845DnonsynTatGat53510.96226420797-20799
ORF1ab/nsp1647Y47DY6845DnonsynTaTGaC5320.037735820797-20799

Details of the mutation Y47D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1647Y47DTatGat5153All0.00001
ORF1ab/nsp1647Y47DTaTGaC253All0
ORF1ab/nsp1647Y47DTatGat1919AY.430.000084
ORF1ab/nsp1647Y47DTatGat77AY.30.00007
ORF1ab/nsp1647Y47DTatGat44B.1.617.20.000015
ORF1ab/nsp1647Y47DTatGat33AY.420.000121
ORF1ab/nsp1647Y47DTatGat33AY.46.60.000217
ORF1ab/nsp1647Y47DTatGat120.055556
ORF1ab/nsp1647Y47DTaTGaC120.055556
ORF1ab/nsp1647Y47DTatGat22AY.1020.000053
ORF1ab/nsp1647Y47DTatGat22B.10.000018
ORF1ab/nsp1647Y47DTatGat11AY.1030.000006
ORF1ab/nsp1647Y47DTatGat11AY.1100.000113
ORF1ab/nsp1647Y47DTatGat11AY.1130.000142
ORF1ab/nsp1647Y47DTatGat11AY.330.000067
ORF1ab/nsp1647Y47DTatGat11AY.40.000002
ORF1ab/nsp1647Y47DTatGat11AY.670.000464
ORF1ab/nsp1647Y47DTatGat11AY.840.000437
ORF1ab/nsp1647Y47DTatGat11AY.9.20.000037
ORF1ab/nsp1647Y47DTatGat11AY.990.001049
ORF1ab/nsp1647Y47DTatGat11B.1.177.210.000076
ORF1ab/nsp1647Y47DTaTGaC11B.1.5250.000113