CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Y47C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1647Y47CY6845CnonsyntAttGt540.820797-20799
ORF1ab/nsp1647Y47CY6845CnonsyntATtGC510.220797-20799

Details of the mutation Y47C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1647Y47CtAttGt45All0.000001
ORF1ab/nsp1647Y47CtATtGC15All0
ORF1ab/nsp1647Y47CtATtGC120.055556
ORF1ab/nsp1647Y47CtAttGt120.055556
ORF1ab/nsp1647Y47CtAttGt11B0.000128
ORF1ab/nsp1647Y47CtAttGt11B.10.000009
ORF1ab/nsp1647Y47CtAttGt11B.1.5260.000024