CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = T93T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1693T93TT6891TsynacGacT34981343740.98264820935-20937
ORF1ab/nsp1693T93TT6891TsynacGacA349815830.016666220935-20937
ORF1ab/nsp1693T93TT6891TsynacGacC34981240.00068608720935-20937

Details of the mutation T93T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1693T93TacGacT3437434981All0.006574
ORF1ab/nsp1693T93TacGacA58334981All0.000112
ORF1ab/nsp1693T93TacGacC2434981All0.000005
ORF1ab/nsp1693T93TacGacT1653616573B.1.617.20.062265
ORF1ab/nsp1693T93TacGacA3616573B.1.617.20.000136
ORF1ab/nsp1693T93TacGacC116573B.1.617.20.000004
ORF1ab/nsp1693T93TacGacT1032410329AY.430.04574
ORF1ab/nsp1693T93TacGacA410329AY.430.000018
ORF1ab/nsp1693T93TacGacC110329AY.430.000004
ORF1ab/nsp1693T93TacGacT31113111AY.120.983249
ORF1ab/nsp1693T93TacGacT833844AY.440.00507
ORF1ab/nsp1693T93TacGacA11844AY.440.000067
ORF1ab/nsp1693T93TacGacT603604AY.390.014901
ORF1ab/nsp1693T93TacGacA1604AY.390.000025
ORF1ab/nsp1693T93TacGacT375377AY.460.03903
ORF1ab/nsp1693T93TacGacA2377AY.460.000208
ORF1ab/nsp1693T93TacGacT347358AY.1020.0092
ORF1ab/nsp1693T93TacGacA11358AY.1020.000292
ORF1ab/nsp1693T93TacGacT215259B.1.1.70.000192
ORF1ab/nsp1693T93TacGacA43259B.1.1.70.000038
ORF1ab/nsp1693T93TacGacC1259B.1.1.70.000001
ORF1ab/nsp1693T93TacGacT179180AY.5.40.04953
ORF1ab/nsp1693T93TacGacA1180AY.5.40.000277
ORF1ab/nsp1693T93TacGacA129157AY.330.008614
ORF1ab/nsp1693T93TacGacT28157AY.330.00187
ORF1ab/nsp1693T93TacGacT110129AY.1030.000683
ORF1ab/nsp1693T93TacGacA19129AY.1030.000118
ORF1ab/nsp1693T93TacGacT123123AY.34.10.062723
ORF1ab/nsp1693T93TacGacT112112AY.450.013629
ORF1ab/nsp1693T93TacGacT9899AY.1170.008283
ORF1ab/nsp1693T93TacGacA199AY.1170.000085
ORF1ab/nsp1693T93TacGacA7987AY.680.021626
ORF1ab/nsp1693T93TacGacT887AY.680.00219
ORF1ab/nsp1693T93TacGacT8585AY.840.037183
ORF1ab/nsp1693T93TacGacA6670B.1.20.000581
ORF1ab/nsp1693T93TacGacT470B.1.20.000035
ORF1ab/nsp1693T93TacGacT6566AY.1190.002295
ORF1ab/nsp1693T93TacGacA166AY.1190.000035
ORF1ab/nsp1693T93TacGacT5151AY.880.045093
ORF1ab/nsp1693T93TacGacT4250AY.250.000253
ORF1ab/nsp1693T93TacGacA850AY.250.000048
ORF1ab/nsp1693T93TacGacT4646AY.990.048269
ORF1ab/nsp1693T93TacGacT2645AY.40.00004
ORF1ab/nsp1693T93TacGacA1945AY.40.00003
ORF1ab/nsp1693T93TacGacT4444AY.580.039927
ORF1ab/nsp1693T93TacGacT3941AY.5.30.013158
ORF1ab/nsp1693T93TacGacA241AY.5.30.000675
ORF1ab/nsp1693T93TacGacT4040AY.230.00279
ORF1ab/nsp1693T93TacGacT3939AY.320.020767
ORF1ab/nsp1693T93TacGacT3535AY.1050.022508
ORF1ab/nsp1693T93TacGacT3435AY.50.000702
ORF1ab/nsp1693T93TacGacA135AY.50.000021
ORF1ab/nsp1693T93TacGacT3131AY.1110.005678
ORF1ab/nsp1693T93TacGacT2731B.10.000247
ORF1ab/nsp1693T93TacGacA331B.10.000027
ORF1ab/nsp1693T93TacGacC131B.10.000009
ORF1ab/nsp1693T93TacGacT2929AY.190.033067
ORF1ab/nsp1693T93TacGacT2929AY.46.60.002094
ORF1ab/nsp1693T93TacGacT2829AY.980.002212
ORF1ab/nsp1693T93TacGacA129AY.980.000079
ORF1ab/nsp1693T93TacGacT2929Q.10.003663
ORF1ab/nsp1693T93TacGacT2828AY.1080.030871
ORF1ab/nsp1693T93TacGacT2626AY.920.007469
ORF1ab/nsp1693T93TacGacT2525AY.560.040128
ORF1ab/nsp1693T93TacGacT2424AY.890.117647
ORF1ab/nsp1693T93TacGacT2222AY.420.000885
ORF1ab/nsp1693T93TacGacT2122AY.46.20.013342
ORF1ab/nsp1693T93TacGacA122AY.46.20.000635
ORF1ab/nsp1693T93TacGacA1919A.2.50.009481
ORF1ab/nsp1693T93TacGacT1717AY.1210.0023
ORF1ab/nsp1693T93TacGacT1717AY.140.001496
ORF1ab/nsp1693T93TacGacT1317AY.200.000505
ORF1ab/nsp1693T93TacGacA417AY.200.000155
ORF1ab/nsp1693T93TacGacT1617AY.470.000498
ORF1ab/nsp1693T93TacGacA117AY.470.000031
ORF1ab/nsp1693T93TacGacT1717AY.98.10.000823
ORF1ab/nsp1693T93TacGacT1317P.10.000205
ORF1ab/nsp1693T93TacGacA317P.10.000047
ORF1ab/nsp1693T93TacGacC117P.10.000016
ORF1ab/nsp1693T93TacGacT1515B.1.1.3710.15625
ORF1ab/nsp1693T93TacGacT1515B.400.005464
ORF1ab/nsp1693T93TacGacT1414AY.530.004025
ORF1ab/nsp1693T93TacGacA1114B.1.10.0002
ORF1ab/nsp1693T93TacGacT314B.1.10.000054
ORF1ab/nsp1693T93TacGacA1314B.1.5260.000306
ORF1ab/nsp1693T93TacGacT114B.1.5260.000024
ORF1ab/nsp1693T93TacGacT1213AY.1180.000752
ORF1ab/nsp1693T93TacGacA113AY.1180.000063
ORF1ab/nsp1693T93TacGacT1313AY.640.007738
ORF1ab/nsp1693T93TacGacT1013AY.740.001156
ORF1ab/nsp1693T93TacGacA313AY.740.000347
ORF1ab/nsp1693T93TacGacT1313AY.780.020031
ORF1ab/nsp1693T93TacGacT1212AY.1060.004019
ORF1ab/nsp1693T93TacGacT1212AY.1130.001709
ORF1ab/nsp1693T93TacGacA912AY.30.00009
ORF1ab/nsp1693T93TacGacT312AY.30.00003
ORF1ab/nsp1693T93TacGacT1111AY.110.014726
ORF1ab/nsp1693T93TacGacA911AY.4.20.000195
ORF1ab/nsp1693T93TacGacT211AY.4.20.000043
ORF1ab/nsp1693T93TacGacT1010AY.4.30.008418
ORF1ab/nsp1693T93TacGacT99AY.100.004769
ORF1ab/nsp1693T93TacGacT59AY.1160.001434
ORF1ab/nsp1693T93TacGacA49AY.1160.001147
ORF1ab/nsp1693T93TacGacT89B.1.1600.00025
ORF1ab/nsp1693T93TacGacC19B.1.1600.000031
ORF1ab/nsp1693T93TacGacT59B.1.2580.000333
ORF1ab/nsp1693T93TacGacA49B.1.2580.000266
ORF1ab/nsp1693T93TacGacT88AY.46.10.008214
ORF1ab/nsp1693T93TacGacT78AY.950.005327
ORF1ab/nsp1693T93TacGacA18AY.950.000761
ORF1ab/nsp1693T93TacGacA88B.1.1.5190.000318
ORF1ab/nsp1693T93TacGacT88B.1.36.10.009122
ORF1ab/nsp1693T93TacGacT88P.20.001493
ORF1ab/nsp1693T93TacGacT57AY.1000.00023
ORF1ab/nsp1693T93TacGacA27AY.1000.000092
ORF1ab/nsp1693T93TacGacT77AY.1100.000789
ORF1ab/nsp1693T93TacGacT67AY.1140.001387
ORF1ab/nsp1693T93TacGacA17AY.1140.000231
ORF1ab/nsp1693T93TacGacT77AY.1200.00026
ORF1ab/nsp1693T93TacGacA77AY.20.002493
ORF1ab/nsp1693T93TacGacT77AY.590.003708
ORF1ab/nsp1693T93TacGacT77AY.670.00325
ORF1ab/nsp1693T93TacGacT77AY.820.009498
ORF1ab/nsp1693T93TacGacC77B.1.1.250.00398
ORF1ab/nsp1693T93TacGacT77B.1.1.330.002946
ORF1ab/nsp1693T93TacGacT66AY.770.006764
ORF1ab/nsp1693T93TacGacT66AY.870.004996
ORF1ab/nsp1693T93TacGacT66AY.99.10.009317
ORF1ab/nsp1693T93TacGacA56B.1.2340.00066
ORF1ab/nsp1693T93TacGacT16B.1.2340.000132
ORF1ab/nsp1693T93TacGacA56B.1.4290.000118
ORF1ab/nsp1693T93TacGacT16B.1.4290.000024
ORF1ab/nsp1693T93TacGacT45AY.39.10.000158
ORF1ab/nsp1693T93TacGacA15AY.39.10.00004
ORF1ab/nsp1693T93TacGacT45AY.4.40.001637
ORF1ab/nsp1693T93TacGacA15AY.4.40.000409
ORF1ab/nsp1693T93TacGacT55AY.90.000338
ORF1ab/nsp1693T93TacGacT45AY.9.20.000147
ORF1ab/nsp1693T93TacGacA15AY.9.20.000037
ORF1ab/nsp1693T93TacGacT55AY.960.010373
ORF1ab/nsp1693T93TacGacT45B0.000511
ORF1ab/nsp1693T93TacGacC15B0.000128
ORF1ab/nsp1693T93TacGacT55B.1.1.2140.000277
ORF1ab/nsp1693T93TacGacT55B.1.1.3740.011876
ORF1ab/nsp1693T93TacGacT44AY.520.003257
ORF1ab/nsp1693T93TacGacT44AY.80.002424
ORF1ab/nsp1693T93TacGacA34B.1.1770.00004
ORF1ab/nsp1693T93TacGacT14B.1.1770.000013
ORF1ab/nsp1693T93TacGacC34B.1.351.30.002629
ORF1ab/nsp1693T93TacGacT14B.1.351.30.000876
ORF1ab/nsp1693T93TacGacT24B.1.617.10.000258
ORF1ab/nsp1693T93TacGacA24B.1.617.10.000258
ORF1ab/nsp1693T93TacGacC34C.370.000348
ORF1ab/nsp1693T93TacGacT14C.370.000116
ORF1ab/nsp1693T93TacGacA33AY.1070.001398
ORF1ab/nsp1693T93TacGacT33AY.340.000291
ORF1ab/nsp1693T93TacGacT33AY.4.2.10.000447
ORF1ab/nsp1693T93TacGacT33AY.570.001969
ORF1ab/nsp1693T93TacGacT33AY.60.000123
ORF1ab/nsp1693T93TacGacT33AY.600.002814
ORF1ab/nsp1693T93TacGacT33AY.900.002053
ORF1ab/nsp1693T93TacGacT23AY.99.20.000184
ORF1ab/nsp1693T93TacGacA13AY.99.20.000092
ORF1ab/nsp1693T93TacGacT33B.1.1.1780.125
ORF1ab/nsp1693T93TacGacT33P.1.140.000143
ORF1ab/nsp1693T93TacGacT22AY.1010.000981
ORF1ab/nsp1693T93TacGacA22AY.3.10.000171
ORF1ab/nsp1693T93TacGacT22AY.39.1.10.001449
ORF1ab/nsp1693T93TacGacT22AY.400.001929
ORF1ab/nsp1693T93TacGacT22AY.410.000588
ORF1ab/nsp1693T93TacGacT22AY.46.50.000397
ORF1ab/nsp1693T93TacGacT22AY.480.00093
ORF1ab/nsp1693T93TacGacT22AY.500.001599
ORF1ab/nsp1693T93TacGacT22AY.610.00021
ORF1ab/nsp1693T93TacGacT22AY.620.000871
ORF1ab/nsp1693T93TacGacT22AY.700.000417
ORF1ab/nsp1693T93TacGacT22AY.750.000112
ORF1ab/nsp1693T93TacGacA22B.1.1.3260.003521
ORF1ab/nsp1693T93TacGacA12B.1.3510.00003
ORF1ab/nsp1693T93TacGacC12B.1.3510.00003
ORF1ab/nsp1693T93TacGacT22B.1.36.290.001035
ORF1ab/nsp1693T93TacGacT22B.1.4690.00722
ORF1ab/nsp1693T93TacGacA12B.1.6210.000089
ORF1ab/nsp1693T93TacGacC12B.1.6210.000089
ORF1ab/nsp1693T93TacGacT12R.10.00009
ORF1ab/nsp1693T93TacGacA12R.10.00009
ORF1ab/nsp1693T93TacGacA110.055556
ORF1ab/nsp1693T93TacGacA11A.2.40.003367
ORF1ab/nsp1693T93TacGacA11A.2.5.30.010309
ORF1ab/nsp1693T93TacGacT11AY.10.000396
ORF1ab/nsp1693T93TacGacT11AY.120.10.000321
ORF1ab/nsp1693T93TacGacT11AY.130.000161
ORF1ab/nsp1693T93TacGacT11AY.160.00038
ORF1ab/nsp1693T93TacGacT11AY.210.001898
ORF1ab/nsp1693T93TacGacT11AY.240.000431
ORF1ab/nsp1693T93TacGacT11AY.260.000028
ORF1ab/nsp1693T93TacGacA11AY.270.000065
ORF1ab/nsp1693T93TacGacT11AY.360.000148
ORF1ab/nsp1693T93TacGacT11AY.490.003195
ORF1ab/nsp1693T93TacGacT11AY.540.000095
ORF1ab/nsp1693T93TacGacT11AY.70.000196
ORF1ab/nsp1693T93TacGacT11AY.7.20.000559
ORF1ab/nsp1693T93TacGacA11AY.710.000475
ORF1ab/nsp1693T93TacGacT11AY.75.10.00018
ORF1ab/nsp1693T93TacGacT11AY.850.000427
ORF1ab/nsp1693T93TacGacT11AY.860.00083
ORF1ab/nsp1693T93TacGacT11AY.910.00073
ORF1ab/nsp1693T93TacGacT11AY.930.000273
ORF1ab/nsp1693T93TacGacT11AY.970.001701
ORF1ab/nsp1693T93TacGacT11B.1.1.1920.002309
ORF1ab/nsp1693T93TacGacT11B.1.1.2100.005714
ORF1ab/nsp1693T93TacGacA11B.1.1.2790.001121
ORF1ab/nsp1693T93TacGacT11B.1.1.280.000311
ORF1ab/nsp1693T93TacGacA11B.1.1.3180.000302
ORF1ab/nsp1693T93TacGacA11B.1.1280.000635
ORF1ab/nsp1693T93TacGacT11B.1.160.230.004831
ORF1ab/nsp1693T93TacGacT11B.1.177.210.000076
ORF1ab/nsp1693T93TacGacA11B.1.177.820.000477
ORF1ab/nsp1693T93TacGacT11B.1.258.210.007752
ORF1ab/nsp1693T93TacGacA11B.1.351.20.000303
ORF1ab/nsp1693T93TacGacT11B.1.360.000146
ORF1ab/nsp1693T93TacGacT11B.1.3610.001289
ORF1ab/nsp1693T93TacGacC11B.1.5250.000113
ORF1ab/nsp1693T93TacGacT11B.1.5410.004425
ORF1ab/nsp1693T93TacGacA11B.1.5440.006024
ORF1ab/nsp1693T93TacGacT11B.1.5800.004065
ORF1ab/nsp1693T93TacGacT11B.1.6370.000073
ORF1ab/nsp1693T93TacGacA11B.1.940.027027
ORF1ab/nsp1693T93TacGacT11C.36.30.000567
ORF1ab/nsp1693T93TacGacC11D.20.000075
ORF1ab/nsp1693T93TacGacT11N.40.004255
ORF1ab/nsp1693T93TacGacA11P.1.120.000484
ORF1ab/nsp1693T93TacGacA11Q.60.006623
ORF1ab/nsp1693T93TacGacA11Q.80.000165