CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = T140del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16140T140delT6938deldelACA---4747121076-21078

Details of the mutation T140del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16140T140delACA---4747All0.000009
ORF1ab/nsp16140T140delACA---1313B.1.1.70.000012
ORF1ab/nsp16140T140delACA---55AY.40.000008
ORF1ab/nsp16140T140delACA---44AY.4.50.00043
ORF1ab/nsp16140T140delACA---33P.1.150.000697
ORF1ab/nsp16140T140delACA---220.111111
ORF1ab/nsp16140T140delACA---22B.1.617.20.000008
ORF1ab/nsp16140T140delACA---11AY.1030.000006
ORF1ab/nsp16140T140delACA---11AY.1200.000037
ORF1ab/nsp16140T140delACA---11AY.330.000067
ORF1ab/nsp16140T140delACA---11AY.430.000004
ORF1ab/nsp16140T140delACA---11B.1.1.3110.000358
ORF1ab/nsp16140T140delACA---11B.1.1.700.000341
ORF1ab/nsp16140T140delACA---11B.1.1770.000013
ORF1ab/nsp16140T140delACA---11B.1.177.40.000211
ORF1ab/nsp16140T140delACA---11B.1.177.540.000606
ORF1ab/nsp16140T140delACA---11B.1.177.620.001192
ORF1ab/nsp16140T140delACA---11B.1.177.70.000165
ORF1ab/nsp16140T140delACA---11B.1.177.90.001332
ORF1ab/nsp16140T140delACA---11B.1.2580.000067
ORF1ab/nsp16140T140delACA---11B.1.360.000146
ORF1ab/nsp16140T140delACA---11B.1.5250.000113
ORF1ab/nsp16140T140delACA---11B.1.6200.000946
ORF1ab/nsp16140T140delACA---11B.340.013699
ORF1ab/nsp16140T140delACA---11U.30.003861