CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = T140T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16140T140TT6938TsynacAacG2121340.63207521076-21078
ORF1ab/nsp16140T140TT6938TsynacAacC212440.20754721076-21078
ORF1ab/nsp16140T140TT6938TsynacAacT212340.16037721076-21078

Details of the mutation T140T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16140T140TacAacG134212All0.000026
ORF1ab/nsp16140T140TacAacC44212All0.000008
ORF1ab/nsp16140T140TacAacT34212All0.000007
ORF1ab/nsp16140T140TacAacG3132B.1.20.000273
ORF1ab/nsp16140T140TacAacT132B.1.20.000009
ORF1ab/nsp16140T140TacAacC2828AY.140.002464
ORF1ab/nsp16140T140TacAacG1520B.1.1.70.000013
ORF1ab/nsp16140T140TacAacT520B.1.1.70.000004
ORF1ab/nsp16140T140TacAacG1919B.1.4250.056886
ORF1ab/nsp16140T140TacAacG1616AY.1180.001002
ORF1ab/nsp16140T140TacAacT1414B.1.5260.000329
ORF1ab/nsp16140T140TacAacT99B.1.4290.000212
ORF1ab/nsp16140T140TacAacG88AY.1030.00005
ORF1ab/nsp16140T140TacAacG67AY.440.000037
ORF1ab/nsp16140T140TacAacC17AY.440.000006
ORF1ab/nsp16140T140TacAacC77AY.980.000553
ORF1ab/nsp16140T140TacAacG57B.1.617.20.000019
ORF1ab/nsp16140T140TacAacT17B.1.617.20.000004
ORF1ab/nsp16140T140TacAacC17B.1.617.20.000004
ORF1ab/nsp16140T140TacAacG24B.10.000018
ORF1ab/nsp16140T140TacAacC14B.10.000009
ORF1ab/nsp16140T140TacAacT14B.10.000009
ORF1ab/nsp16140T140TacAacG33B.1.1600.000094
ORF1ab/nsp16140T140TacAacG22AY.40.000003
ORF1ab/nsp16140T140TacAacG22AY.430.000009
ORF1ab/nsp16140T140TacAacG22AY.50.000041
ORF1ab/nsp16140T140TacAacC12B.1.10.000018
ORF1ab/nsp16140T140TacAacG12B.1.10.000018
ORF1ab/nsp16140T140TacAacG22B.1.362.20.009434
ORF1ab/nsp16140T140TacAacG22B.1.5250.000226
ORF1ab/nsp16140T140TacAacG22P.10.000032
ORF1ab/nsp16140T140TacAacG11A.2.40.003367
ORF1ab/nsp16140T140TacAacG11AY.1020.000027
ORF1ab/nsp16140T140TacAacG11AY.1040.001984
ORF1ab/nsp16140T140TacAacG11AY.1190.000035
ORF1ab/nsp16140T140TacAacG11AY.230.00007
ORF1ab/nsp16140T140TacAacT11AY.260.000028
ORF1ab/nsp16140T140TacAacG11AY.290.000016
ORF1ab/nsp16140T140TacAacG11AY.30.00001
ORF1ab/nsp16140T140TacAacC11AY.380.000499
ORF1ab/nsp16140T140TacAacG11AY.4.20.000022
ORF1ab/nsp16140T140TacAacG11AY.460.000104
ORF1ab/nsp16140T140TacAacC11AY.540.000095
ORF1ab/nsp16140T140TacAacG11AY.550.000917
ORF1ab/nsp16140T140TacAacC11AY.610.000105
ORF1ab/nsp16140T140TacAacG11B.1.1.2410.00207
ORF1ab/nsp16140T140TacAacC11B.1.1.280.000311
ORF1ab/nsp16140T140TacAacG11B.1.1.3160.000925
ORF1ab/nsp16140T140TacAacG11B.1.1770.000013
ORF1ab/nsp16140T140TacAacT11B.1.2210.000071
ORF1ab/nsp16140T140TacAacT11B.1.3510.00003
ORF1ab/nsp16140T140TacAacG11B.1.5610.000397
ORF1ab/nsp16140T140TacAacG11B.1.5960.000087
ORF1ab/nsp16140T140TacAacG11B.310.003731
ORF1ab/nsp16140T140TacAacC11D.20.000075