CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = T140S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16140T140ST6938SnonsynAcaTca650.83333321076-21078
ORF1ab/nsp16140T140ST6938SnonsynAcATcT610.16666721076-21078

Details of the mutation T140S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16140T140SAcaTca56All0.000001
ORF1ab/nsp16140T140SAcATcT16All0
ORF1ab/nsp16140T140SAcATcT12B.1.3510.00003
ORF1ab/nsp16140T140SAcaTca12B.1.3510.00003
ORF1ab/nsp16140T140SAcaTca11B.10.000009
ORF1ab/nsp16140T140SAcaTca11B.1.177.440.000519
ORF1ab/nsp16140T140SAcaTca11B.1.20.000009
ORF1ab/nsp16140T140SAcaTca11P.1.10.000318