CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = S33del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1633S33del1S6831del1delAgt-gt310.33333320755-20757
ORF1ab/nsp1633S33del1S6831del1delagTag-310.33333320755-20757
ORF1ab/nsp1633S33del1S6831del1delAGt-At310.33333320755-20757

Details of the mutation S33del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1633S33del1Agt-gt13All0
ORF1ab/nsp1633S33del1agTag-13All0
ORF1ab/nsp1633S33del1AGt-At13All0
ORF1ab/nsp1633S33del1agTag-11AY.440.000006
ORF1ab/nsp1633S33del1Agt-gt11B.1.1.70.000001
ORF1ab/nsp1633S33del1AGt-At11B.1.617.20.000004