CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = S33R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1633S33RS6831RnonsynAgtCgt5395110.94805220755-20757
ORF1ab/nsp1633S33RS6831RnonsynagTagG539140.02597420755-20757
ORF1ab/nsp1633S33RS6831RnonsynagTagA539140.02597420755-20757

Details of the mutation S33R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1633S33RAgtCgt511539All0.000098
ORF1ab/nsp1633S33RagTagG14539All0.000003
ORF1ab/nsp1633S33RagTagA14539All0.000003
ORF1ab/nsp1633S33RAgtCgt370370B.10.003389
ORF1ab/nsp1633S33RAgtCgt7777B.1.4450.905882
ORF1ab/nsp1633S33RAgtCgt2929B.1.3081
ORF1ab/nsp1633S33RAgtCgt2020B.1.3100.952381
ORF1ab/nsp1633S33RAgtCgt55B.1.1.5190.000199
ORF1ab/nsp1633S33RagTagG34B.1.10.000054
ORF1ab/nsp1633S33RagTagA14B.1.10.000018
ORF1ab/nsp1633S33RagTagA23B.1.617.20.000008
ORF1ab/nsp1633S33RagTagG13B.1.617.20.000004
ORF1ab/nsp1633S33RagTagA12B.1.1770.000013
ORF1ab/nsp1633S33RAgtCgt12B.1.1770.000013
ORF1ab/nsp1633S33RagTagA22B.1.3230.041667
ORF1ab/nsp1633S33RAgtCgt22B.1.4530.006472
ORF1ab/nsp1633S33RagTagA110.055556
ORF1ab/nsp1633S33RAgtCgt11A0.000387
ORF1ab/nsp1633S33RagTagG11AY.1140.000231
ORF1ab/nsp1633S33RagTagG11AY.340.000097
ORF1ab/nsp1633S33RagTagG11AY.390.000025
ORF1ab/nsp1633S33RagTagG11AY.4.20.000022
ORF1ab/nsp1633S33RagTagG11AY.430.000004
ORF1ab/nsp1633S33RagTagG11AY.46.60.000072
ORF1ab/nsp1633S33RagTagG11AY.5.30.000337
ORF1ab/nsp1633S33RagTagA11AY.60.000041
ORF1ab/nsp1633S33RagTagA11AY.910.00073
ORF1ab/nsp1633S33RagTagA11AY.990.001049
ORF1ab/nsp1633S33RAgtCgt11B.1.1.10.000327
ORF1ab/nsp1633S33RagTagG11B.1.1.1610.003534
ORF1ab/nsp1633S33RagTagG11B.1.1.3110.000358
ORF1ab/nsp1633S33RagTagA11B.1.1.370.000193
ORF1ab/nsp1633S33RagTagG11B.1.1180.006711
ORF1ab/nsp1633S33RagTagA11B.1.2210.000071
ORF1ab/nsp1633S33RagTagA11B.1.2350.002519
ORF1ab/nsp1633S33RAgtCgt11B.1.2930.0125
ORF1ab/nsp1633S33RAgtCgt11B.1.3240.001605
ORF1ab/nsp1633S33RAgtCgt11B.1.3900.010638
ORF1ab/nsp1633S33RagTagA11B.1.4270.00005
ORF1ab/nsp1633S33RAgtCgt11B.1.4430.004673
ORF1ab/nsp1633S33RAgtCgt11B.1.6260.005714