CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = S33C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1633S33CS6831CnonsynAgtTgt19180.94736820755-20757
ORF1ab/nsp1633S33CS6831CnonsynAgTTgC1910.052631620755-20757

Details of the mutation S33C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1633S33CAgtTgt1819All0.000003
ORF1ab/nsp1633S33CAgTTgC119All0
ORF1ab/nsp1633S33CAgtTgt44AY.120.10.001284
ORF1ab/nsp1633S33CAgtTgt22B.1.1.5190.000079
ORF1ab/nsp1633S33CAgtTgt22B.1.1.70.000002
ORF1ab/nsp1633S33CAgtTgt11AY.1110.000183
ORF1ab/nsp1633S33CAgtTgt11AY.34.10.00051
ORF1ab/nsp1633S33CAgtTgt11AY.39.10.00004
ORF1ab/nsp1633S33CAgtTgt11AY.40.000002
ORF1ab/nsp1633S33CAgtTgt11AY.4.20.000022
ORF1ab/nsp1633S33CAgTTgC11AY.430.000004
ORF1ab/nsp1633S33CAgtTgt11AY.440.000006
ORF1ab/nsp1633S33CAgtTgt11AY.46.60.000072
ORF1ab/nsp1633S33CAgtTgt11AY.99.20.000092
ORF1ab/nsp1633S33CAgtTgt11B.1.177.480.003125
ORF1ab/nsp1633S33CAgtTgt11B.1.5050.004386