CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = S166S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16166S166SS6964SsyntcCtcT174016260.93448321154-21156
ORF1ab/nsp16166S166SS6964SsyntcCtcA17401110.063793121154-21156
ORF1ab/nsp16166S166SS6964SsyntcCtcG174030.0017241421154-21156

Details of the mutation S166S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16166S166StcCtcT16261740All0.000311
ORF1ab/nsp16166S166StcCtcA1111740All0.000021
ORF1ab/nsp16166S166StcCtcG31740All0.000001
ORF1ab/nsp16166S166StcCtcT310320AY.40.000482
ORF1ab/nsp16166S166StcCtcA10320AY.40.000016
ORF1ab/nsp16166S166StcCtcT287289B.1.4290.006753
ORF1ab/nsp16166S166StcCtcA2289B.1.4290.000047
ORF1ab/nsp16166S166StcCtcT202248B.1.1.70.000181
ORF1ab/nsp16166S166StcCtcA45248B.1.1.70.00004
ORF1ab/nsp16166S166StcCtcG1248B.1.1.70.000001
ORF1ab/nsp16166S166StcCtcT150154B.1.20.001321
ORF1ab/nsp16166S166StcCtcA4154B.1.20.000035
ORF1ab/nsp16166S166StcCtcT107110B.1.617.20.000403
ORF1ab/nsp16166S166StcCtcA3110B.1.617.20.000011
ORF1ab/nsp16166S166StcCtcT8888AY.230.006138
ORF1ab/nsp16166S166StcCtcT6969AY.3.10.005883
ORF1ab/nsp16166S166StcCtcT3240AY.440.000195
ORF1ab/nsp16166S166StcCtcA840AY.440.000049
ORF1ab/nsp16166S166StcCtcT3133AY.250.000186
ORF1ab/nsp16166S166StcCtcA233AY.250.000012
ORF1ab/nsp16166S166StcCtcT2424B.1.1.5190.000953
ORF1ab/nsp16166S166StcCtcT2022AY.1030.000124
ORF1ab/nsp16166S166StcCtcA222AY.1030.000012
ORF1ab/nsp16166S166StcCtcT2020B.1.1.1570.018265
ORF1ab/nsp16166S166StcCtcT2020B.1.160.190.714286
ORF1ab/nsp16166S166StcCtcT1616AY.1200.000595
ORF1ab/nsp16166S166StcCtcT1416AY.9.20.000514
ORF1ab/nsp16166S166StcCtcA216AY.9.20.000073
ORF1ab/nsp16166S166StcCtcT1414B.1.360.002043
ORF1ab/nsp16166S166StcCtcT1313AY.470.000404
ORF1ab/nsp16166S166StcCtcT1013B.10.000092
ORF1ab/nsp16166S166StcCtcA213B.10.000018
ORF1ab/nsp16166S166StcCtcG113B.10.000009
ORF1ab/nsp16166S166StcCtcT1212C.370.001393
ORF1ab/nsp16166S166StcCtcT1010B.1.1770.000132
ORF1ab/nsp16166S166StcCtcT79B.1.3510.000208
ORF1ab/nsp16166S166StcCtcA29B.1.3510.000059
ORF1ab/nsp16166S166StcCtcT78AY.430.000031
ORF1ab/nsp16166S166StcCtcA18AY.430.000004
ORF1ab/nsp16166S166StcCtcT67AY.30.00006
ORF1ab/nsp16166S166StcCtcA17AY.30.00001
ORF1ab/nsp16166S166StcCtcT67AY.420.000241
ORF1ab/nsp16166S166StcCtcA17AY.420.00004
ORF1ab/nsp16166S166StcCtcA77Q.80.001154
ORF1ab/nsp16166S166StcCtcT66AY.1190.000212
ORF1ab/nsp16166S166StcCtcT66AY.320.003195
ORF1ab/nsp16166S166StcCtcT56AY.4.20.000108
ORF1ab/nsp16166S166StcCtcA16AY.4.20.000022
ORF1ab/nsp16166S166StcCtcT66B.1.10.000109
ORF1ab/nsp16166S166StcCtcT66B.1.3690.001711
ORF1ab/nsp16166S166StcCtcT36B.1.5960.000261
ORF1ab/nsp16166S166StcCtcA36B.1.5960.000261
ORF1ab/nsp16166S166StcCtcA66C.360.005464
ORF1ab/nsp16166S166StcCtcT55AY.1130.000712
ORF1ab/nsp16166S166StcCtcT55B.1.4270.000252
ORF1ab/nsp16166S166StcCtcT55B.1.5680.005556
ORF1ab/nsp16166S166StcCtcT44A.23.10.002817
ORF1ab/nsp16166S166StcCtcT44AY.390.000099
ORF1ab/nsp16166S166StcCtcT44AY.50.000083
ORF1ab/nsp16166S166StcCtcT44P.10.000063
ORF1ab/nsp16166S166StcCtcT33AY.260.000085
ORF1ab/nsp16166S166StcCtcT33AY.460.000312
ORF1ab/nsp16166S166StcCtcT33AY.610.000314
ORF1ab/nsp16166S166StcCtcT33AY.75.10.000541
ORF1ab/nsp16166S166StcCtcT33B.1.1.280.000934
ORF1ab/nsp16166S166StcCtcT220.111111
ORF1ab/nsp16166S166StcCtcT22A0.000774
ORF1ab/nsp16166S166StcCtcT22AY.1020.000053
ORF1ab/nsp16166S166StcCtcT22AY.1160.000574
ORF1ab/nsp16166S166StcCtcT22AY.1210.000271
ORF1ab/nsp16166S166StcCtcT22AY.290.000032
ORF1ab/nsp16166S166StcCtcT22AY.330.000134
ORF1ab/nsp16166S166StcCtcT22AY.4.50.000215
ORF1ab/nsp16166S166StcCtcT22AY.650.001066
ORF1ab/nsp16166S166StcCtcT22B.1.177.820.000955
ORF1ab/nsp16166S166StcCtcT22B.1.2210.000142
ORF1ab/nsp16166S166StcCtcT12B.1.3110.000275
ORF1ab/nsp16166S166StcCtcA12B.1.3110.000275
ORF1ab/nsp16166S166StcCtcA12B.1.36.290.000517
ORF1ab/nsp16166S166StcCtcT12B.1.36.290.000517
ORF1ab/nsp16166S166StcCtcT22B.1.4530.006472
ORF1ab/nsp16166S166StcCtcT22R.10.00018
ORF1ab/nsp16166S166StcCtcT11A.210.00277
ORF1ab/nsp16166S166StcCtcT11A.60.005128
ORF1ab/nsp16166S166StcCtcT11AD.20.000219
ORF1ab/nsp16166S166StcCtcT11AY.1000.000046
ORF1ab/nsp16166S166StcCtcT11AY.1010.00049
ORF1ab/nsp16166S166StcCtcA11AY.1100.000113
ORF1ab/nsp16166S166StcCtcT11AY.130.000161
ORF1ab/nsp16166S166StcCtcT11AY.200.000039
ORF1ab/nsp16166S166StcCtcT11AY.360.000148
ORF1ab/nsp16166S166StcCtcT11AY.450.000122
ORF1ab/nsp16166S166StcCtcA11AY.46.50.000198
ORF1ab/nsp16166S166StcCtcT11AY.5.40.000277
ORF1ab/nsp16166S166StcCtcT11AY.540.000095
ORF1ab/nsp16166S166StcCtcT11AY.550.000917
ORF1ab/nsp16166S166StcCtcT11AY.60.000041
ORF1ab/nsp16166S166StcCtcT11AY.620.000436
ORF1ab/nsp16166S166StcCtcT11AY.740.000116
ORF1ab/nsp16166S166StcCtcT11AY.750.000056
ORF1ab/nsp16166S166StcCtcT11AY.920.000287
ORF1ab/nsp16166S166StcCtcA11AY.99.10.001553
ORF1ab/nsp16166S166StcCtcT11AY.99.20.000092
ORF1ab/nsp16166S166StcCtcT11B.1.1.1580.012195
ORF1ab/nsp16166S166StcCtcT11B.1.1.2140.000055
ORF1ab/nsp16166S166StcCtcT11B.1.1.2160.00089
ORF1ab/nsp16166S166StcCtcA11B.1.1.2580.003257
ORF1ab/nsp16166S166StcCtcT11B.1.1.2970.002237
ORF1ab/nsp16166S166StcCtcT11B.1.1.3180.000302
ORF1ab/nsp16166S166StcCtcA11B.1.1.3260.001761
ORF1ab/nsp16166S166StcCtcT11B.1.1.390.00051
ORF1ab/nsp16166S166StcCtcT11B.1.1.500.000679
ORF1ab/nsp16166S166StcCtcA11B.1.110.30.000718
ORF1ab/nsp16166S166StcCtcT11B.1.1600.000031
ORF1ab/nsp16166S166StcCtcT11B.1.177.420.000894
ORF1ab/nsp16166S166StcCtcT11B.1.177.600.000218
ORF1ab/nsp16166S166StcCtcT11B.1.220.001318
ORF1ab/nsp16166S166StcCtcT11B.1.2340.000132
ORF1ab/nsp16166S166StcCtcT11B.1.2580.000067
ORF1ab/nsp16166S166StcCtcT11B.1.3480.018182
ORF1ab/nsp16166S166StcCtcT11B.1.438.10.000107
ORF1ab/nsp16166S166StcCtcT11B.1.4600.017857
ORF1ab/nsp16166S166StcCtcT11B.1.4700.001404
ORF1ab/nsp16166S166StcCtcT11B.1.4970.000315
ORF1ab/nsp16166S166StcCtcT11B.1.5260.000024
ORF1ab/nsp16166S166StcCtcT11B.1.5270.003704
ORF1ab/nsp16166S166StcCtcG11B.1.5770.000687
ORF1ab/nsp16166S166StcCtcT11B.1.617.10.000129
ORF1ab/nsp16166S166StcCtcT11B.1.6370.000073
ORF1ab/nsp16166S166StcCtcT11B.60.00091
ORF1ab/nsp16166S166StcCtcA11D.20.000075
ORF1ab/nsp16166S166StcCtcT11P.1.10.000318
ORF1ab/nsp16166S166StcCtcT11P.1.100.000269
ORF1ab/nsp16166S166StcCtcT11P.1.160.000374
ORF1ab/nsp16166S166StcCtcT11Q.10.000126