CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = S145S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16145S145SS6943SsyntcTtcC5565430.97661921091-21093
ORF1ab/nsp16145S145SS6943SsyntcTtcA556110.019784221091-21093
ORF1ab/nsp16145S145SS6943SsyntcTtcG55620.0035971221091-21093

Details of the mutation S145S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16145S145StcTtcC543556All0.000104
ORF1ab/nsp16145S145StcTtcA11556All0.000002
ORF1ab/nsp16145S145StcTtcG2556All0
ORF1ab/nsp16145S145StcTtcC333333B.1.1.40.991071
ORF1ab/nsp16145S145StcTtcC128129AY.40.000199
ORF1ab/nsp16145S145StcTtcA1129AY.40.000002
ORF1ab/nsp16145S145StcTtcC910B.1.1.70.000008
ORF1ab/nsp16145S145StcTtcA110B.1.1.70.000001
ORF1ab/nsp16145S145StcTtcC99AY.880.007958
ORF1ab/nsp16145S145StcTtcC77B.1.360.001021
ORF1ab/nsp16145S145StcTtcC67B.1.617.20.000023
ORF1ab/nsp16145S145StcTtcA17B.1.617.20.000004
ORF1ab/nsp16145S145StcTtcC66AY.430.000027
ORF1ab/nsp16145S145StcTtcC66B.1.4970.001889
ORF1ab/nsp16145S145StcTtcC66B.1.6370.000438
ORF1ab/nsp16145S145StcTtcC55AY.1190.000177
ORF1ab/nsp16145S145StcTtcA35AY.390.000074
ORF1ab/nsp16145S145StcTtcC25AY.390.000049
ORF1ab/nsp16145S145StcTtcC55B.1.20.000044
ORF1ab/nsp16145S145StcTtcC23B.10.000018
ORF1ab/nsp16145S145StcTtcA13B.10.000009
ORF1ab/nsp16145S145StcTtcC22AY.440.000012
ORF1ab/nsp16145S145StcTtcC22B.1.2210.000142
ORF1ab/nsp16145S145StcTtcA110.055556
ORF1ab/nsp16145S145StcTtcA11A.20.000662
ORF1ab/nsp16145S145StcTtcC11AY.230.00007
ORF1ab/nsp16145S145StcTtcC11AY.240.000431
ORF1ab/nsp16145S145StcTtcC11AY.360.000148
ORF1ab/nsp16145S145StcTtcC11AY.50.000021
ORF1ab/nsp16145S145StcTtcC11AY.680.000274
ORF1ab/nsp16145S145StcTtcC11AY.980.000079
ORF1ab/nsp16145S145StcTtcG11B.1.10.000018
ORF1ab/nsp16145S145StcTtcC11B.1.177.750.001041
ORF1ab/nsp16145S145StcTtcC11B.1.2580.000067
ORF1ab/nsp16145S145StcTtcC11B.1.3660.004878
ORF1ab/nsp16145S145StcTtcC11B.1.4290.000024
ORF1ab/nsp16145S145StcTtcC11B.1.5260.000024
ORF1ab/nsp16145S145StcTtcC11B.1.5680.001111
ORF1ab/nsp16145S145StcTtcC11B.1.5750.000303
ORF1ab/nsp16145S145StcTtcC11B.1.6210.000089
ORF1ab/nsp16145S145StcTtcA11B.400.000364
ORF1ab/nsp16145S145StcTtcG11B.550.00295
ORF1ab/nsp16145S145StcTtcC11B.6.80.008264
ORF1ab/nsp16145S145StcTtcA11P.10.000016