CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = R216C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16216R216CR7014CnonsynCgcTgc1158201155370.99755721304-21306
ORF1ab/nsp16216R216CR7014CnonsynCgCTgT1158202830.0024434521304-21306

Details of the mutation R216C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16216R216CCgcTgc115537115820All0.022098
ORF1ab/nsp16216R216CCgCTgT283115820All0.000054
ORF1ab/nsp16216R216CCgcTgc9928699528B.1.20.87425
ORF1ab/nsp16216R216CCgCTgT24299528B.1.20.002131
ORF1ab/nsp16216R216CCgcTgc80238030B.1.5960.699111
ORF1ab/nsp16216R216CCgCTgT78030B.1.5960.00061
ORF1ab/nsp16216R216CCgcTgc20152038B.10.018456
ORF1ab/nsp16216R216CCgCTgT232038B.10.000211
ORF1ab/nsp16216R216CCgcTgc16801680AY.320.894569
ORF1ab/nsp16216R216CCgcTgc11331133AY.40.001763
ORF1ab/nsp16216R216CCgcTgc424424B.1.617.20.001597
ORF1ab/nsp16216R216CCgcTgc324324AY.1030.002012
ORF1ab/nsp16216R216CCgcTgc301301AY.250.00181
ORF1ab/nsp16216R216CCgcTgc267267B.1.1.70.000239
ORF1ab/nsp16216R216CCgcTgc206206AY.390.005091
ORF1ab/nsp16216R216CCgcTgc196197B.1.10.003556
ORF1ab/nsp16216R216CCgCTgT1197B.1.10.000018
ORF1ab/nsp16216R216CCgcTgc118118AY.470.00367
ORF1ab/nsp16216R216CCgcTgc102102B.1.5950.026618
ORF1ab/nsp16216R216CCgcTgc6565AY.39.10.002575
ORF1ab/nsp16216R216CCgcTgc6161AY.430.00027
ORF1ab/nsp16216R216CCgcTgc5656B.1.36.260.16
ORF1ab/nsp16216R216CCgcTgc5252AY.30.000517
ORF1ab/nsp16216R216CCgcTgc4646AY.1100.005184
ORF1ab/nsp16216R216CCgcTgc4545AY.440.000274
ORF1ab/nsp16216R216CCgcTgc4545B.1.4290.001059
ORF1ab/nsp16216R216CCgcTgc4545P.1.160.016835
ORF1ab/nsp16216R216CCgcTgc4040B.1.2340.005278
ORF1ab/nsp16216R216CCgcTgc3939B.1.177.730.022084
ORF1ab/nsp16216R216CCgcTgc3131AY.200.001205
ORF1ab/nsp16216R216CCgcTgc1524B.1.1.5190.000596
ORF1ab/nsp16216R216CCgCTgT924B.1.1.5190.000357
ORF1ab/nsp16216R216CCgcTgc2323AY.50.000475
ORF1ab/nsp16216R216CCgcTgc2222B.1.2430.001531
ORF1ab/nsp16216R216CCgcTgc2222B.1.5800.089431
ORF1ab/nsp16216R216CCgcTgc2121AY.98.10.001017
ORF1ab/nsp16216R216CCgcTgc2020AY.9.20.000735
ORF1ab/nsp16216R216CCgcTgc2020B.1.2320.010747
ORF1ab/nsp16216R216CCgcTgc1919B.1.1.3350.246753
ORF1ab/nsp16216R216CCgcTgc1717AY.4.20.000369
ORF1ab/nsp16216R216CCgcTgc1717P.10.000268
ORF1ab/nsp16216R216CCgcTgc1616AY.99.20.001475
ORF1ab/nsp16216R216CCgcTgc1616B.1.4270.000808
ORF1ab/nsp16216R216CCgcTgc1515B0.001917
ORF1ab/nsp16216R216CCgcTgc1515B.1.1600.000468
ORF1ab/nsp16216R216CCgcTgc1414AY.330.000935
ORF1ab/nsp16216R216CCgcTgc1414B.1.3690.003993
ORF1ab/nsp16216R216CCgcTgc1313AY.290.000205
ORF1ab/nsp16216R216CCgcTgc1313B.1.1.3260.022887
ORF1ab/nsp16216R216CCgcTgc1313B.1.1770.000171
ORF1ab/nsp16216R216CCgcTgc1313B.1.3960.009174
ORF1ab/nsp16216R216CCgcTgc1212B.1.5820.005888
ORF1ab/nsp16216R216CCgcTgc1111B.1.5640.004685
ORF1ab/nsp16216R216CCgcTgc1111B.1.5760.009973
ORF1ab/nsp16216R216CCgcTgc1010AY.116.10.003114
ORF1ab/nsp16216R216CCgcTgc1010AY.4.50.001075
ORF1ab/nsp16216R216CCgcTgc1010B.1.2060.008157
ORF1ab/nsp16216R216CCgcTgc99AY.260.000255
ORF1ab/nsp16216R216CCgcTgc99AY.46.60.00065
ORF1ab/nsp16216R216CCgcTgc99B.1.1.2750.101124
ORF1ab/nsp16216R216CCgcTgc99B.1.3110.002471
ORF1ab/nsp16216R216CCgcTgc99B.1.360.001313
ORF1ab/nsp16216R216CCgcTgc99B.1.5610.003573
ORF1ab/nsp16216R216CCgcTgc99B.1.5670.03
ORF1ab/nsp16216R216CCgcTgc99B.1.6120.023873
ORF1ab/nsp16216R216CCgcTgc99B.1.6210.000797
ORF1ab/nsp16216R216CCgcTgc88AY.1180.000501
ORF1ab/nsp16216R216CCgcTgc88AY.230.000558
ORF1ab/nsp16216R216CCgcTgc88AY.3.10.000682
ORF1ab/nsp16216R216CCgcTgc88AY.340.000776
ORF1ab/nsp16216R216CCgcTgc88B.1.6370.000585
ORF1ab/nsp16216R216CCgcTgc77AY.1140.001618
ORF1ab/nsp16216R216CCgcTgc77B.1.1.280.002179
ORF1ab/nsp16216R216CCgcTgc77B.1.5250.000792
ORF1ab/nsp16216R216CCgcTgc77B.1.5770.004811
ORF1ab/nsp16216R216CCgcTgc66AY.1170.000507
ORF1ab/nsp16216R216CCgcTgc66AY.450.00073
ORF1ab/nsp16216R216CCgcTgc66AY.460.000624
ORF1ab/nsp16216R216CCgcTgc66B.1.1.5070.052174
ORF1ab/nsp16216R216CCgcTgc66B.1.2390.007326
ORF1ab/nsp16216R216CCgcTgc66B.1.2400.001293
ORF1ab/nsp16216R216CCgcTgc66B.1.2840.078947
ORF1ab/nsp16216R216CCgcTgc66B.1.3490.004289
ORF1ab/nsp16216R216CCgcTgc66B.1.36.180.002521
ORF1ab/nsp16216R216CCgcTgc66R.10.00054
ORF1ab/nsp16216R216CCgcTgc55AY.1020.000133
ORF1ab/nsp16216R216CCgcTgc55AY.420.000201
ORF1ab/nsp16216R216CCgcTgc55AY.46.50.000992
ORF1ab/nsp16216R216CCgcTgc55B.1.3610.006443
ORF1ab/nsp16216R216CCgcTgc44AY.1110.000733
ORF1ab/nsp16216R216CCgcTgc44AY.1190.000141
ORF1ab/nsp16216R216CCgcTgc44AY.300.001583
ORF1ab/nsp16216R216CCgcTgc44AY.360.000593
ORF1ab/nsp16216R216CCgcTgc44AY.720.005442
ORF1ab/nsp16216R216CCgcTgc44AY.750.000224
ORF1ab/nsp16216R216CCgcTgc44AY.950.003044
ORF1ab/nsp16216R216CCgcTgc44B.1.1110.0047
ORF1ab/nsp16216R216CCgcTgc44B.1.3240.006421
ORF1ab/nsp16216R216CCgcTgc44B.1.3510.000119
ORF1ab/nsp16216R216CCgcTgc44B.1.438.10.000429
ORF1ab/nsp16216R216CCgcTgc44B.1.5900.018182
ORF1ab/nsp16216R216CCgcTgc330.166667
ORF1ab/nsp16216R216CCgcTgc33AY.1130.000427
ORF1ab/nsp16216R216CCgcTgc33AY.1200.000112
ORF1ab/nsp16216R216CCgcTgc33AY.46.10.00308
ORF1ab/nsp16216R216CCgcTgc33AY.860.00249
ORF1ab/nsp16216R216CCgcTgc23B.1.1.1610.007067
ORF1ab/nsp16216R216CCgCTgT13B.1.1.1610.003534
ORF1ab/nsp16216R216CCgcTgc33B.1.1.3010.003538
ORF1ab/nsp16216R216CCgcTgc33B.1.1.4340.001046
ORF1ab/nsp16216R216CCgcTgc33B.1.1390.002199
ORF1ab/nsp16216R216CCgcTgc33B.1.2100.006397
ORF1ab/nsp16216R216CCgcTgc33B.1.3060.017143
ORF1ab/nsp16216R216CCgcTgc33B.1.36.380.004926
ORF1ab/nsp16216R216CCgcTgc33B.1.3750.002459
ORF1ab/nsp16216R216CCgcTgc33B.1.4000.001287
ORF1ab/nsp16216R216CCgcTgc33B.1.4040.003906
ORF1ab/nsp16216R216CCgcTgc33B.1.5170.001281
ORF1ab/nsp16216R216CCgcTgc33B.1.5260.000071
ORF1ab/nsp16216R216CCgcTgc33B.1.5690.043478
ORF1ab/nsp16216R216CCgcTgc33B.1.5810.028302
ORF1ab/nsp16216R216CCgcTgc33P.20.00056
ORF1ab/nsp16216R216CCgcTgc22A.2.50.000998
ORF1ab/nsp16216R216CCgcTgc22AY.1040.003968
ORF1ab/nsp16216R216CCgcTgc22AY.1080.002205
ORF1ab/nsp16216R216CCgcTgc22AY.120.10.000642
ORF1ab/nsp16216R216CCgcTgc22AY.4.2.10.000298
ORF1ab/nsp16216R216CCgcTgc22AY.46.20.001271
ORF1ab/nsp16216R216CCgcTgc22AY.60.000082
ORF1ab/nsp16216R216CCgcTgc22AY.620.000871
ORF1ab/nsp16216R216CCgcTgc22AY.650.001066
ORF1ab/nsp16216R216CCgcTgc22AY.75.10.000361
ORF1ab/nsp16216R216CCgcTgc22AY.90.000135
ORF1ab/nsp16216R216CCgcTgc22AY.960.004149
ORF1ab/nsp16216R216CCgcTgc22AY.980.000158
ORF1ab/nsp16216R216CCgcTgc22AY.990.002099
ORF1ab/nsp16216R216CCgcTgc22B.1.1.2100.011429
ORF1ab/nsp16216R216CCgcTgc22B.1.1.2220.000408
ORF1ab/nsp16216R216CCgcTgc22B.1.1.2580.006515
ORF1ab/nsp16216R216CCgcTgc22B.1.1.3540.008772
ORF1ab/nsp16216R216CCgcTgc22B.1.1.4200.002012
ORF1ab/nsp16216R216CCgcTgc22B.1.1260.002551
ORF1ab/nsp16216R216CCgcTgc22B.1.1570.00597
ORF1ab/nsp16216R216CCgcTgc22B.1.177.110.003396
ORF1ab/nsp16216R216CCgcTgc22B.1.2580.000133
ORF1ab/nsp16216R216CCgcTgc22B.1.3050.004301
ORF1ab/nsp16216R216CCgcTgc22B.1.3360.004878
ORF1ab/nsp16216R216CCgcTgc22B.1.3370.011173
ORF1ab/nsp16216R216CCgcTgc22B.1.3670.001585
ORF1ab/nsp16216R216CCgcTgc22B.1.3700.016
ORF1ab/nsp16216R216CCgcTgc22B.1.3950.014085
ORF1ab/nsp16216R216CCgcTgc22B.1.3990.003868
ORF1ab/nsp16216R216CCgcTgc22B.1.5210.00995
ORF1ab/nsp16216R216CCgcTgc22B.1.5460.007407
ORF1ab/nsp16216R216CCgcTgc22B.1.5500.027397
ORF1ab/nsp16216R216CCgcTgc22B.1.5650.001621
ORF1ab/nsp16216R216CCgcTgc22B.1.5680.002222
ORF1ab/nsp16216R216CCgcTgc22B.1.5750.000607
ORF1ab/nsp16216R216CCgcTgc22B.1.5890.015152
ORF1ab/nsp16216R216CCgcTgc22B.1.6230.001073
ORF1ab/nsp16216R216CCgcTgc22B.1.780.017094
ORF1ab/nsp16216R216CCgcTgc22C.36.30.001134
ORF1ab/nsp16216R216CCgcTgc22P.1.120.000968
ORF1ab/nsp16216R216CCgcTgc22P.1.140.000096
ORF1ab/nsp16216R216CCgcTgc22P.1.150.000465
ORF1ab/nsp16216R216CCgcTgc11A0.000387
ORF1ab/nsp16216R216CCgcTgc11A.10.000282
ORF1ab/nsp16216R216CCgcTgc11A.2.5.20.001572
ORF1ab/nsp16216R216CCgcTgc11AD.20.000219
ORF1ab/nsp16216R216CCgcTgc11AY.1000.000046
ORF1ab/nsp16216R216CCgcTgc11AY.1050.000643
ORF1ab/nsp16216R216CCgcTgc11AY.1060.000335
ORF1ab/nsp16216R216CCgcTgc11AY.1070.000466
ORF1ab/nsp16216R216CCgcTgc11AY.1160.000287
ORF1ab/nsp16216R216CCgcTgc11AY.130.000161
ORF1ab/nsp16216R216CCgcTgc11AY.140.000088
ORF1ab/nsp16216R216CCgcTgc11AY.160.00038
ORF1ab/nsp16216R216CCgcTgc11AY.410.000294
ORF1ab/nsp16216R216CCgcTgc11AY.5.30.000337
ORF1ab/nsp16216R216CCgcTgc11AY.550.000917
ORF1ab/nsp16216R216CCgcTgc11AY.590.00053
ORF1ab/nsp16216R216CCgcTgc11AY.680.000274
ORF1ab/nsp16216R216CCgcTgc11AY.70.000196
ORF1ab/nsp16216R216CCgcTgc11AY.710.000475
ORF1ab/nsp16216R216CCgcTgc11AY.820.001357
ORF1ab/nsp16216R216CCgcTgc11AY.840.000437
ORF1ab/nsp16216R216CCgcTgc11AY.850.000427
ORF1ab/nsp16216R216CCgcTgc11AY.9.10.000084
ORF1ab/nsp16216R216CCgcTgc11AY.9.2.10.001976
ORF1ab/nsp16216R216CCgcTgc11AY.910.00073
ORF1ab/nsp16216R216CCgcTgc11AZ.20.000821
ORF1ab/nsp16216R216CCgcTgc11B.1.1.10.000327
ORF1ab/nsp16216R216CCgcTgc11B.1.1.1860.003436
ORF1ab/nsp16216R216CCgcTgc11B.1.1.1890.001513
ORF1ab/nsp16216R216CCgcTgc11B.1.1.1920.002309
ORF1ab/nsp16216R216CCgcTgc11B.1.1.2300.009174
ORF1ab/nsp16216R216CCgcTgc11B.1.1.2310.003096
ORF1ab/nsp16216R216CCgcTgc11B.1.1.250.000569
ORF1ab/nsp16216R216CCgcTgc11B.1.1.2790.001121
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3160.000925
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3170.000412
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3220.008772
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3290.003846
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3340.016393
ORF1ab/nsp16216R216CCgcTgc11B.1.1.3690.000446
ORF1ab/nsp16216R216CCgcTgc11B.1.1.390.00051
ORF1ab/nsp16216R216CCgcTgc11B.1.1.4210.030303
ORF1ab/nsp16216R216CCgcTgc11B.1.1.50.008333
ORF1ab/nsp16216R216CCgcTgc11B.1.1.5180.006329
ORF1ab/nsp16216R216CCgcTgc11B.1.1.630.000386
ORF1ab/nsp16216R216CCgcTgc11B.1.1.700.000341
ORF1ab/nsp16216R216CCgcTgc11B.1.1.830.00271
ORF1ab/nsp16216R216CCgcTgc11B.1.110.30.000718
ORF1ab/nsp16216R216CCgcTgc11B.1.1190.010526
ORF1ab/nsp16216R216CCgcTgc11B.1.1470.000756
ORF1ab/nsp16216R216CCgcTgc11B.1.160.140.002119
ORF1ab/nsp16216R216CCgcTgc11B.1.160.260.002421
ORF1ab/nsp16216R216CCgcTgc11B.1.177.120.000152
ORF1ab/nsp16216R216CCgcTgc11B.1.177.210.000076
ORF1ab/nsp16216R216CCgcTgc11B.1.177.320.00135
ORF1ab/nsp16216R216CCgcTgc11B.1.177.510.004566
ORF1ab/nsp16216R216CCgcTgc11B.1.177.70.000165
ORF1ab/nsp16216R216CCgcTgc11B.1.177.810.000189
ORF1ab/nsp16216R216CCgcTgc11B.1.177.870.000728
ORF1ab/nsp16216R216CCgcTgc11B.1.1890.004292
ORF1ab/nsp16216R216CCgcTgc11B.1.2210.000071
ORF1ab/nsp16216R216CCgcTgc11B.1.2360.002053
ORF1ab/nsp16216R216CCgcTgc11B.1.2370.004975
ORF1ab/nsp16216R216CCgcTgc11B.1.258.170.000104
ORF1ab/nsp16216R216CCgcTgc11B.1.2800.007143
ORF1ab/nsp16216R216CCgcTgc11B.1.2980.002114
ORF1ab/nsp16216R216CCgcTgc11B.1.3100.047619
ORF1ab/nsp16216R216CCgcTgc11B.1.3300.028571
ORF1ab/nsp16216R216CCgcTgc11B.1.3400.004292
ORF1ab/nsp16216R216CCgcTgc11B.1.351.20.000303
ORF1ab/nsp16216R216CCgcTgc11B.1.36.100.004785
ORF1ab/nsp16216R216CCgcTgc11B.1.36.70.004
ORF1ab/nsp16216R216CCgcTgc11B.1.3620.001541
ORF1ab/nsp16216R216CCgcTgc11B.1.3800.006623
ORF1ab/nsp16216R216CCgcTgc11B.1.3910.001127
ORF1ab/nsp16216R216CCgcTgc11B.1.4030.003268
ORF1ab/nsp16216R216CCgcTgc11B.1.4090.000781
ORF1ab/nsp16216R216CCgcTgc11B.1.4130.004255
ORF1ab/nsp16216R216CCgcTgc11B.1.4230.010204
ORF1ab/nsp16216R216CCgcTgc11B.1.4240.008065
ORF1ab/nsp16216R216CCgcTgc11B.1.4250.002994
ORF1ab/nsp16216R216CCgcTgc11B.1.4280.00102
ORF1ab/nsp16216R216CCgcTgc11B.1.4330.003195
ORF1ab/nsp16216R216CCgcTgc11B.1.4370.020833
ORF1ab/nsp16216R216CCgcTgc11B.1.4430.004673
ORF1ab/nsp16216R216CCgcTgc11B.1.4730.019231
ORF1ab/nsp16216R216CCgcTgc11B.1.4760.1
ORF1ab/nsp16216R216CCgcTgc11B.1.5370.02
ORF1ab/nsp16216R216CCgcTgc11B.1.5510.00129
ORF1ab/nsp16216R216CCgcTgc11B.1.5560.007519
ORF1ab/nsp16216R216CCgcTgc11B.1.5660.019231
ORF1ab/nsp16216R216CCgcTgc11B.1.5740.002151
ORF1ab/nsp16216R216CCgcTgc11B.1.575.10.002439
ORF1ab/nsp16216R216CCgcTgc11B.1.5880.00091
ORF1ab/nsp16216R216CCgcTgc11B.1.5930.01087
ORF1ab/nsp16216R216CCgcTgc11B.1.595.20.04
ORF1ab/nsp16216R216CCgcTgc11B.1.6020.006536
ORF1ab/nsp16216R216CCgcTgc11B.1.6050.005952
ORF1ab/nsp16216R216CCgcTgc11B.1.6090.000479
ORF1ab/nsp16216R216CCgcTgc11B.1.6110.04
ORF1ab/nsp16216R216CCgcTgc11B.1.6280.000352
ORF1ab/nsp16216R216CCgcTgc11B.1.810.021277
ORF1ab/nsp16216R216CCgcTgc11B.1.88.10.004808
ORF1ab/nsp16216R216CCgcTgc11B.1.9.50.005682
ORF1ab/nsp16216R216CCgcTgc11B.1.910.002075
ORF1ab/nsp16216R216CCgcTgc11B.400.000364
ORF1ab/nsp16216R216CCgcTgc11B.610.005747
ORF1ab/nsp16216R216CCgcTgc11C.360.000911
ORF1ab/nsp16216R216CCgcTgc11P.1.100.000269
ORF1ab/nsp16216R216CCgcTgc11P.1.10.10.00813
ORF1ab/nsp16216R216CCgcTgc11P.1.40.000977
ORF1ab/nsp16216R216CCgcTgc11Q.70.001111
ORF1ab/nsp16216R216CCgcTgc11Q.80.000165