CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Q28R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1628Q28RQ6826RnonsyncAacGa1611600.99378920740-20742
ORF1ab/nsp1628Q28RQ6826RnonsyncAAcGG16110.0062111820740-20742

Details of the mutation Q28R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1628Q28RcAacGa160161All0.000031
ORF1ab/nsp1628Q28RcAAcGG1161All0
ORF1ab/nsp1628Q28RcAacGa9999AY.250.000595
ORF1ab/nsp1628Q28RcAacGa1313B.1.177.860.002385
ORF1ab/nsp1628Q28RcAacGa88B.10.000073
ORF1ab/nsp1628Q28RcAacGa66AY.1130.000854
ORF1ab/nsp1628Q28RcAacGa66AY.40.000009
ORF1ab/nsp1628Q28RcAacGa44AY.430.000018
ORF1ab/nsp1628Q28RcAacGa44B.1.4290.000094
ORF1ab/nsp1628Q28RcAacGa33AY.330.0002
ORF1ab/nsp1628Q28RcAAcGG120.055556
ORF1ab/nsp1628Q28RcAacGa120.055556
ORF1ab/nsp1628Q28RcAacGa22AY.390.000049
ORF1ab/nsp1628Q28RcAacGa11AY.1000.000046
ORF1ab/nsp1628Q28RcAacGa11AY.1020.000027
ORF1ab/nsp1628Q28RcAacGa11AY.1030.000006
ORF1ab/nsp1628Q28RcAacGa11AY.1200.000037
ORF1ab/nsp1628Q28RcAacGa11AY.230.00007
ORF1ab/nsp1628Q28RcAacGa11AY.290.000016
ORF1ab/nsp1628Q28RcAacGa11AY.30.00001
ORF1ab/nsp1628Q28RcAacGa11AY.840.000437
ORF1ab/nsp1628Q28RcAacGa11B.1.1.10.000327
ORF1ab/nsp1628Q28RcAacGa11B.1.2210.000071
ORF1ab/nsp1628Q28RcAacGa11B.1.258.170.000104
ORF1ab/nsp1628Q28RcAacGa11B.1.4000.000429
ORF1ab/nsp1628Q28RcAacGa11B.1.5850.027778
ORF1ab/nsp1628Q28RcAacGa11P.1.160.000374