CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Q28K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1628Q28KQ6826KnonsynCaaAaa102510240.99902420740-20742
ORF1ab/nsp1628Q28KQ6826KnonsynCaAAaG102510.0009756120740-20742

Details of the mutation Q28K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1628Q28KCaaAaa10241025All0.000196
ORF1ab/nsp1628Q28KCaAAaG11025All0
ORF1ab/nsp1628Q28KCaaAaa111111AY.40.000173
ORF1ab/nsp1628Q28KCaaAaa100100B.1.1901
ORF1ab/nsp1628Q28KCaaAaa9393B.1.617.20.00035
ORF1ab/nsp1628Q28KCaaAaa6969AY.1190.002436
ORF1ab/nsp1628Q28KCaaAaa5858B.1.1770.000764
ORF1ab/nsp1628Q28KCaaAaa5656AY.440.000341
ORF1ab/nsp1628Q28KCaaAaa5455B.1.1.70.000048
ORF1ab/nsp1628Q28KCaAAaG155B.1.1.70.000001
ORF1ab/nsp1628Q28KCaaAaa5454AY.98.10.002615
ORF1ab/nsp1628Q28KCaaAaa4949AY.430.000217
ORF1ab/nsp1628Q28KCaaAaa2828B.1.4270.001414
ORF1ab/nsp1628Q28KCaaAaa2424AY.290.000379
ORF1ab/nsp1628Q28KCaaAaa2424AY.30.000239
ORF1ab/nsp1628Q28KCaaAaa2424B.1.2400.005174
ORF1ab/nsp1628Q28KCaaAaa2121AY.610.0022
ORF1ab/nsp1628Q28KCaaAaa1818AY.1030.000112
ORF1ab/nsp1628Q28KCaaAaa1717AY.250.000102
ORF1ab/nsp1628Q28KCaaAaa1717B.1.177.420.015206
ORF1ab/nsp1628Q28KCaaAaa1414AY.50.000289
ORF1ab/nsp1628Q28KCaaAaa1313B.10.000119
ORF1ab/nsp1628Q28KCaaAaa1111AY.750.000616
ORF1ab/nsp1628Q28KCaaAaa1010B.1.10.000181
ORF1ab/nsp1628Q28KCaaAaa88B.1.20.00007
ORF1ab/nsp1628Q28KCaaAaa77B.1.2800.05
ORF1ab/nsp1628Q28KCaaAaa77P.10.00011
ORF1ab/nsp1628Q28KCaaAaa66AY.4.20.00013
ORF1ab/nsp1628Q28KCaaAaa66P.1.120.002904
ORF1ab/nsp1628Q28KCaaAaa55AY.120.00158
ORF1ab/nsp1628Q28KCaaAaa44AY.1160.001147
ORF1ab/nsp1628Q28KCaaAaa44AY.60.000165
ORF1ab/nsp1628Q28KCaaAaa44AY.75.10.000721
ORF1ab/nsp1628Q28KCaaAaa44B.1.1.3180.001207
ORF1ab/nsp1628Q28KCaaAaa33AY.1200.000112
ORF1ab/nsp1628Q28KCaaAaa33AY.16.10.00141
ORF1ab/nsp1628Q28KCaaAaa33AY.420.000121
ORF1ab/nsp1628Q28KCaaAaa33AY.470.000093
ORF1ab/nsp1628Q28KCaaAaa33AY.550.002752
ORF1ab/nsp1628Q28KCaaAaa33AY.580.002722
ORF1ab/nsp1628Q28KCaaAaa33AY.9.10.000251
ORF1ab/nsp1628Q28KCaaAaa33AY.99.20.000276
ORF1ab/nsp1628Q28KCaaAaa33B.1.617.10.000387
ORF1ab/nsp1628Q28KCaaAaa22A.2.50.000998
ORF1ab/nsp1628Q28KCaaAaa22AY.1020.000053
ORF1ab/nsp1628Q28KCaaAaa22AY.1210.000271
ORF1ab/nsp1628Q28KCaaAaa22AY.130.000322
ORF1ab/nsp1628Q28KCaaAaa22AY.200.000078
ORF1ab/nsp1628Q28KCaaAaa22AY.230.000139
ORF1ab/nsp1628Q28KCaaAaa22AY.460.000208
ORF1ab/nsp1628Q28KCaaAaa22AY.860.00166
ORF1ab/nsp1628Q28KCaaAaa22B.1.177.740.030303
ORF1ab/nsp1628Q28KCaaAaa22B.1.214.10.04
ORF1ab/nsp1628Q28KCaaAaa22B.1.2430.000139
ORF1ab/nsp1628Q28KCaaAaa22B.1.2580.000133
ORF1ab/nsp1628Q28KCaaAaa22B.1.3200.002491
ORF1ab/nsp1628Q28KCaaAaa22B.1.3510.000059
ORF1ab/nsp1628Q28KCaaAaa22B.1.36.290.001035
ORF1ab/nsp1628Q28KCaaAaa22P.1.90.009615
ORF1ab/nsp1628Q28KCaaAaa110.055556
ORF1ab/nsp1628Q28KCaaAaa11A0.000387
ORF1ab/nsp1628Q28KCaaAaa11A.2.5.30.010309
ORF1ab/nsp1628Q28KCaaAaa11AY.1000.000046
ORF1ab/nsp1628Q28KCaaAaa11AY.1130.000142
ORF1ab/nsp1628Q28KCaaAaa11AY.140.000088
ORF1ab/nsp1628Q28KCaaAaa11AY.240.000431
ORF1ab/nsp1628Q28KCaaAaa11AY.260.000028
ORF1ab/nsp1628Q28KCaaAaa11AY.330.000067
ORF1ab/nsp1628Q28KCaaAaa11AY.39.10.00004
ORF1ab/nsp1628Q28KCaaAaa11AY.4.40.000409
ORF1ab/nsp1628Q28KCaaAaa11AY.450.000122
ORF1ab/nsp1628Q28KCaaAaa11AY.46.40.000165
ORF1ab/nsp1628Q28KCaaAaa11AY.46.60.000072
ORF1ab/nsp1628Q28KCaaAaa11AY.5.30.000337
ORF1ab/nsp1628Q28KCaaAaa11AY.510.000909
ORF1ab/nsp1628Q28KCaaAaa11AY.590.00053
ORF1ab/nsp1628Q28KCaaAaa11AY.670.000464
ORF1ab/nsp1628Q28KCaaAaa11AY.680.000274
ORF1ab/nsp1628Q28KCaaAaa11AY.720.001361
ORF1ab/nsp1628Q28KCaaAaa11AY.810.001992
ORF1ab/nsp1628Q28KCaaAaa11AY.9.20.000037
ORF1ab/nsp1628Q28KCaaAaa11AY.980.000079
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.2140.000055
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.2790.001121
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.2840.000107
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.4160.000905
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.5170.006803
ORF1ab/nsp1628Q28KCaaAaa11B.1.1.5190.00004
ORF1ab/nsp1628Q28KCaaAaa11B.1.177.110.001698
ORF1ab/nsp1628Q28KCaaAaa11B.1.177.650.000665
ORF1ab/nsp1628Q28KCaaAaa11B.1.177.750.001041
ORF1ab/nsp1628Q28KCaaAaa11B.1.177.860.000183
ORF1ab/nsp1628Q28KCaaAaa11B.1.2320.000537
ORF1ab/nsp1628Q28KCaaAaa11B.1.2700.005618
ORF1ab/nsp1628Q28KCaaAaa11B.1.3060.005714
ORF1ab/nsp1628Q28KCaaAaa11B.1.36.180.00042
ORF1ab/nsp1628Q28KCaaAaa11B.1.3690.000285
ORF1ab/nsp1628Q28KCaaAaa11B.1.3710.001122
ORF1ab/nsp1628Q28KCaaAaa11B.1.5260.000024
ORF1ab/nsp1628Q28KCaaAaa11B.1.6090.000479
ORF1ab/nsp1628Q28KCaaAaa11C.36.30.000567
ORF1ab/nsp1628Q28KCaaAaa11P.70.004367
ORF1ab/nsp1628Q28KCaaAaa11Q.80.000165
ORF1ab/nsp1628Q28KCaaAaa11Z.10.00289