CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Q28H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1628Q28HQ6826HnonsyncaAcaC111110860.97749820740-20742
ORF1ab/nsp1628Q28HQ6826HnonsyncaAcaT1111250.022502320740-20742

Details of the mutation Q28H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1628Q28HcaAcaC10861111All0.000208
ORF1ab/nsp1628Q28HcaAcaT251111All0.000005
ORF1ab/nsp1628Q28HcaAcaC444444B.1.1.2970.993289
ORF1ab/nsp1628Q28HcaAcaC254256B.1.10.004608
ORF1ab/nsp1628Q28HcaAcaT2256B.1.10.000036
ORF1ab/nsp1628Q28HcaAcaC211213B.1.1.2400.99061
ORF1ab/nsp1628Q28HcaAcaT2213B.1.1.2400.00939
ORF1ab/nsp1628Q28HcaAcaC4141AY.1030.000255
ORF1ab/nsp1628Q28HcaAcaC3131B.10.000284
ORF1ab/nsp1628Q28HcaAcaC2222AJ.11
ORF1ab/nsp1628Q28HcaAcaC1616P.10.000252
ORF1ab/nsp1628Q28HcaAcaC1515AG.11
ORF1ab/nsp1628Q28HcaAcaC58B.1.617.20.000019
ORF1ab/nsp1628Q28HcaAcaT38B.1.617.20.000011
ORF1ab/nsp1628Q28HcaAcaC77AY.390.000173
ORF1ab/nsp1628Q28HcaAcaT56AY.290.000079
ORF1ab/nsp1628Q28HcaAcaC16AY.290.000016
ORF1ab/nsp1628Q28HcaAcaC66B.1.1.2770.004552
ORF1ab/nsp1628Q28HcaAcaC45AY.430.000018
ORF1ab/nsp1628Q28HcaAcaT15AY.430.000004
ORF1ab/nsp1628Q28HcaAcaC55B.1.1.4090.014164
ORF1ab/nsp1628Q28HcaAcaT34B.1.1.70.000003
ORF1ab/nsp1628Q28HcaAcaC14B.1.1.70.000001
ORF1ab/nsp1628Q28HcaAcaC33B.1.1.100.003344
ORF1ab/nsp1628Q28HcaAcaT33B.1.4370.0625
ORF1ab/nsp1628Q28HcaAcaC22B.1.1770.000026
ORF1ab/nsp1628Q28HcaAcaC22B.1.177.520.003515
ORF1ab/nsp1628Q28HcaAcaC11A0.000387
ORF1ab/nsp1628Q28HcaAcaT11AY.1110.000183
ORF1ab/nsp1628Q28HcaAcaC11AY.1200.000037
ORF1ab/nsp1628Q28HcaAcaC11AY.140.000088
ORF1ab/nsp1628Q28HcaAcaC11AY.250.000006
ORF1ab/nsp1628Q28HcaAcaT11AY.260.000028
ORF1ab/nsp1628Q28HcaAcaT11AY.330.000067
ORF1ab/nsp1628Q28HcaAcaC11AY.40.000002
ORF1ab/nsp1628Q28HcaAcaC11AY.750.000056
ORF1ab/nsp1628Q28HcaAcaC11AY.9.20.000037
ORF1ab/nsp1628Q28HcaAcaT11AY.960.002075
ORF1ab/nsp1628Q28HcaAcaC11B.1.1.10.000327
ORF1ab/nsp1628Q28HcaAcaC11B.1.1.1450.037037
ORF1ab/nsp1628Q28HcaAcaC11B.1.1.1610.003534
ORF1ab/nsp1628Q28HcaAcaC11B.1.1.3050.003861
ORF1ab/nsp1628Q28HcaAcaC11B.1.1600.000031
ORF1ab/nsp1628Q28HcaAcaC11B.1.2210.000071
ORF1ab/nsp1628Q28HcaAcaC11B.1.2360.002053
ORF1ab/nsp1628Q28HcaAcaT11B.1.3510.00003
ORF1ab/nsp1628Q28HcaAcaC11B.1.4290.000024
ORF1ab/nsp1628Q28HcaAcaC11B.1.6090.000479
ORF1ab/nsp1628Q28HcaAcaT11C.370.000116