CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = Q18del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1618Q18del2Q6816del2delcAAc--320.66666720710-20712
ORF1ab/nsp1618Q18del2Q6816del2delCAa--a310.33333320710-20712

Details of the mutation Q18del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1618Q18del2cAAc--23All0
ORF1ab/nsp1618Q18del2CAa--a13All0
ORF1ab/nsp1618Q18del2CAa--a11AY.40.000002
ORF1ab/nsp1618Q18del2cAAc--11B.1.1.70.000001
ORF1ab/nsp1618Q18del2cAAc--11B.1.3480.018182