CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = M17L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1617M17LM6815LnonsynAtgCtg50420.8420707-20709
ORF1ab/nsp1617M17LM6815LnonsynAtgTtg5070.1420707-20709
ORF1ab/nsp1617M17LM6815LnonsynAtGTtA5010.0220707-20709

Details of the mutation M17L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1617M17LAtgCtg4250All0.000008
ORF1ab/nsp1617M17LAtgTtg750All0.000001
ORF1ab/nsp1617M17LAtGTtA150All0
ORF1ab/nsp1617M17LAtgCtg1414AY.470.000435
ORF1ab/nsp1617M17LAtgCtg1010AY.40.000016
ORF1ab/nsp1617M17LAtgCtg44AY.16.10.00188
ORF1ab/nsp1617M17LAtgCtg23AY.440.000012
ORF1ab/nsp1617M17LAtgTtg13AY.440.000006
ORF1ab/nsp1617M17LAtgCtg22AY.250.000012
ORF1ab/nsp1617M17LAtgTtg12B.1.10.000018
ORF1ab/nsp1617M17LAtgCtg12B.1.10.000018
ORF1ab/nsp1617M17LAtgTtg12B.1.1.70.000001
ORF1ab/nsp1617M17LAtgCtg12B.1.1.70.000001
ORF1ab/nsp1617M17LAtgTtg12B.1.617.20.000004
ORF1ab/nsp1617M17LAtgCtg12B.1.617.20.000004
ORF1ab/nsp1617M17LAtgCtg12B.1.6210.000089
ORF1ab/nsp1617M17LAtGTtA12B.1.6210.000089
ORF1ab/nsp1617M17LAtgCtg11A.23.10.000704
ORF1ab/nsp1617M17LAtgCtg11AY.390.000025
ORF1ab/nsp1617M17LAtgTtg11AY.39.10.00004
ORF1ab/nsp1617M17LAtgCtg11AY.4.20.000022
ORF1ab/nsp1617M17LAtgCtg11AY.450.000122
ORF1ab/nsp1617M17LAtgCtg11AY.90.000068
ORF1ab/nsp1617M17LAtgCtg11B.10.000009
ORF1ab/nsp1617M17LAtgTtg11B.1.1600.000031
ORF1ab/nsp1617M17LAtgTtg11C.360.000911