CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = M17I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1617M17IM6815InonsynatGatT323529320.90633720707-20709
ORF1ab/nsp1617M17IM6815InonsynatGatA32352950.091190120707-20709
ORF1ab/nsp1617M17IM6815InonsynatGatC323580.0024729520707-20709

Details of the mutation M17I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1617M17IatGatT29323235All0.000561
ORF1ab/nsp1617M17IatGatA2953235All0.000056
ORF1ab/nsp1617M17IatGatC83235All0.000002
ORF1ab/nsp1617M17IatGatT927927AY.880.819629
ORF1ab/nsp1617M17IatGatT459484AY.430.002034
ORF1ab/nsp1617M17IatGatA25484AY.430.000111
ORF1ab/nsp1617M17IatGatT318318AY.30.003163
ORF1ab/nsp1617M17IatGatT212229B.1.1.70.00019
ORF1ab/nsp1617M17IatGatA14229B.1.1.70.000013
ORF1ab/nsp1617M17IatGatC3229B.1.1.70.000003
ORF1ab/nsp1617M17IatGatT152177AY.40.000237
ORF1ab/nsp1617M17IatGatA24177AY.40.000037
ORF1ab/nsp1617M17IatGatC1177AY.40.000002
ORF1ab/nsp1617M17IatGatT100166B.1.617.20.000377
ORF1ab/nsp1617M17IatGatA66166B.1.617.20.000249
ORF1ab/nsp1617M17IatGatT7272B.1.5131
ORF1ab/nsp1617M17IatGatA6769AY.230.004673
ORF1ab/nsp1617M17IatGatT269AY.230.000139
ORF1ab/nsp1617M17IatGatT6060P.1.170.009706
ORF1ab/nsp1617M17IatGatT4850B.10.00044
ORF1ab/nsp1617M17IatGatA250B.10.000018
ORF1ab/nsp1617M17IatGatT4949AY.50.001012
ORF1ab/nsp1617M17IatGatT3841P.10.000599
ORF1ab/nsp1617M17IatGatA341P.10.000047
ORF1ab/nsp1617M17IatGatA2338AY.440.00014
ORF1ab/nsp1617M17IatGatT1538AY.440.000091
ORF1ab/nsp1617M17IatGatA3137AY.1000.001426
ORF1ab/nsp1617M17IatGatT637AY.1000.000276
ORF1ab/nsp1617M17IatGatT3235AY.250.000192
ORF1ab/nsp1617M17IatGatA335AY.250.000018
ORF1ab/nsp1617M17IatGatT2727B.1.1.4101
ORF1ab/nsp1617M17IatGatT1526AY.1190.00053
ORF1ab/nsp1617M17IatGatA1126AY.1190.000388
ORF1ab/nsp1617M17IatGatT2626AY.260.000736
ORF1ab/nsp1617M17IatGatT2425B.1.20.000211
ORF1ab/nsp1617M17IatGatA125B.1.20.000009
ORF1ab/nsp1617M17IatGatT1517AY.390.000371
ORF1ab/nsp1617M17IatGatA217AY.390.000049
ORF1ab/nsp1617M17IatGatT1116AY.1030.000068
ORF1ab/nsp1617M17IatGatA516AY.1030.000031
ORF1ab/nsp1617M17IatGatT1213AY.1020.000318
ORF1ab/nsp1617M17IatGatA113AY.1020.000027
ORF1ab/nsp1617M17IatGatT1112AY.290.000174
ORF1ab/nsp1617M17IatGatA112AY.290.000016
ORF1ab/nsp1617M17IatGatT1212AY.98.10.000581
ORF1ab/nsp1617M17IatGatT1212B.1.2100.025586
ORF1ab/nsp1617M17IatGatT99AY.3.10.000767
ORF1ab/nsp1617M17IatGatT99AY.4.20.000195
ORF1ab/nsp1617M17IatGatT99B.1.1770.000119
ORF1ab/nsp1617M17IatGatT68AY.420.000241
ORF1ab/nsp1617M17IatGatA28AY.420.00008
ORF1ab/nsp1617M17IatGatT88AY.450.000973
ORF1ab/nsp1617M17IatGatT88B.1.10.000145
ORF1ab/nsp1617M17IatGatT88B.1.5960.000697
ORF1ab/nsp1617M17IatGatT77A.2.50.003493
ORF1ab/nsp1617M17IatGatT77AY.330.000467
ORF1ab/nsp1617M17IatGatT77AY.46.20.004447
ORF1ab/nsp1617M17IatGatT66B.1.3510.000178
ORF1ab/nsp1617M17IatGatT56B.1.5260.000118
ORF1ab/nsp1617M17IatGatA16B.1.5260.000024
ORF1ab/nsp1617M17IatGatT55AY.1110.000916
ORF1ab/nsp1617M17IatGatA25AY.39.10.000079
ORF1ab/nsp1617M17IatGatT25AY.39.10.000079
ORF1ab/nsp1617M17IatGatC15AY.39.10.00004
ORF1ab/nsp1617M17IatGatT45AY.46.60.000289
ORF1ab/nsp1617M17IatGatA15AY.46.60.000072
ORF1ab/nsp1617M17IatGatT45D.20.0003
ORF1ab/nsp1617M17IatGatC15D.20.000075
ORF1ab/nsp1617M17IatGatT44AY.4.40.001637
ORF1ab/nsp1617M17IatGatT44AY.460.000416
ORF1ab/nsp1617M17IatGatT44AY.75.10.000721
ORF1ab/nsp1617M17IatGatT44B.1.2580.000266
ORF1ab/nsp1617M17IatGatT44B.1.2670.074074
ORF1ab/nsp1617M17IatGatT44B.1.4290.000094
ORF1ab/nsp1617M17IatGatT44B.1.617.10.000516
ORF1ab/nsp1617M17IatGatT44B.1.6250.009412
ORF1ab/nsp1617M17IatGatT44P.1.20.004624
ORF1ab/nsp1617M17IatGatT33AY.1050.001929
ORF1ab/nsp1617M17IatGatT33AY.1060.001005
ORF1ab/nsp1617M17IatGatT33AY.1170.000254
ORF1ab/nsp1617M17IatGatT33AY.340.000291
ORF1ab/nsp1617M17IatGatT33AY.550.002752
ORF1ab/nsp1617M17IatGatT33AY.640.001786
ORF1ab/nsp1617M17IatGatT33AY.750.000168
ORF1ab/nsp1617M17IatGatA33AY.770.003382
ORF1ab/nsp1617M17IatGatT33B.1.1.5190.000119
ORF1ab/nsp1617M17IatGatT23B.1.1600.000062
ORF1ab/nsp1617M17IatGatA13B.1.1600.000031
ORF1ab/nsp1617M17IatGatT33B.1.36.290.001552
ORF1ab/nsp1617M17IatGatT33B.1.4270.000151
ORF1ab/nsp1617M17IatGatT33B.1.6210.000266
ORF1ab/nsp1617M17IatGatT33B.1.6370.000219
ORF1ab/nsp1617M17IatGatT33L.30.010638
ORF1ab/nsp1617M17IatGatT22AY.1010.000981
ORF1ab/nsp1617M17IatGatA22AY.1040.003968
ORF1ab/nsp1617M17IatGatT22AY.1070.000932
ORF1ab/nsp1617M17IatGatT22AY.1160.000574
ORF1ab/nsp1617M17IatGatT22AY.1200.000074
ORF1ab/nsp1617M17IatGatT22AY.130.000322
ORF1ab/nsp1617M17IatGatT22AY.140.000176
ORF1ab/nsp1617M17IatGatT22AY.360.000296
ORF1ab/nsp1617M17IatGatT22AY.46.40.000329
ORF1ab/nsp1617M17IatGatT22AY.5.30.000675
ORF1ab/nsp1617M17IatGatC12AY.60.000041
ORF1ab/nsp1617M17IatGatT12AY.60.000041
ORF1ab/nsp1617M17IatGatT12AY.90.000068
ORF1ab/nsp1617M17IatGatA12AY.90.000068
ORF1ab/nsp1617M17IatGatT22AY.9.10.000167
ORF1ab/nsp1617M17IatGatA12AY.980.000079
ORF1ab/nsp1617M17IatGatT12AY.980.000079
ORF1ab/nsp1617M17IatGatT22AY.99.20.000184
ORF1ab/nsp1617M17IatGatT22B.1.1.2770.001517
ORF1ab/nsp1617M17IatGatT22B.1.1.330.000842
ORF1ab/nsp1617M17IatGatT22B.1.1.630.000772
ORF1ab/nsp1617M17IatGatT22B.1.1390.001466
ORF1ab/nsp1617M17IatGatT22B.1.177.430.002954
ORF1ab/nsp1617M17IatGatT22B.1.2210.000142
ORF1ab/nsp1617M17IatGatT22B.1.2340.000264
ORF1ab/nsp1617M17IatGatT22B.1.2400.000431
ORF1ab/nsp1617M17IatGatT22B.1.2430.000139
ORF1ab/nsp1617M17IatGatC12B.60.00091
ORF1ab/nsp1617M17IatGatT12B.60.00091
ORF1ab/nsp1617M17IatGatT22C.140.008658
ORF1ab/nsp1617M17IatGatT11AY.1210.000135
ORF1ab/nsp1617M17IatGatT11AY.200.000039
ORF1ab/nsp1617M17IatGatT11AY.210.001898
ORF1ab/nsp1617M17IatGatA11AY.320.000532
ORF1ab/nsp1617M17IatGatT11AY.380.000499
ORF1ab/nsp1617M17IatGatT11AY.470.000031
ORF1ab/nsp1617M17IatGatT11AY.540.000095
ORF1ab/nsp1617M17IatGatT11AY.580.000907
ORF1ab/nsp1617M17IatGatT11AY.610.000105
ORF1ab/nsp1617M17IatGatT11AY.650.000533
ORF1ab/nsp1617M17IatGatT11AY.7.10.000113
ORF1ab/nsp1617M17IatGatT11AY.710.000475
ORF1ab/nsp1617M17IatGatT11AY.840.000437
ORF1ab/nsp1617M17IatGatT11AY.920.000287
ORF1ab/nsp1617M17IatGatT11AY.990.001049
ORF1ab/nsp1617M17IatGatT11AY.99.10.001553
ORF1ab/nsp1617M17IatGatT11B0.000128
ORF1ab/nsp1617M17IatGatT11B.1.1.1610.003534
ORF1ab/nsp1617M17IatGatT11B.1.1.2160.00089
ORF1ab/nsp1617M17IatGatT11B.1.1.2220.000204
ORF1ab/nsp1617M17IatGatT11B.1.1.250.000569
ORF1ab/nsp1617M17IatGatT11B.1.1.3480.000796
ORF1ab/nsp1617M17IatGatA11B.1.1.3960.045455
ORF1ab/nsp1617M17IatGatT11B.1.1.3980.003226
ORF1ab/nsp1617M17IatGatT11B.1.1.470.005348
ORF1ab/nsp1617M17IatGatT11B.1.1.4840.1
ORF1ab/nsp1617M17IatGatT11B.1.1660.008475
ORF1ab/nsp1617M17IatGatT11B.1.177.420.000894
ORF1ab/nsp1617M17IatGatT11B.1.177.440.000519
ORF1ab/nsp1617M17IatGatT11B.1.177.600.000218
ORF1ab/nsp1617M17IatGatT11B.1.177.730.000566
ORF1ab/nsp1617M17IatGatT11B.1.2370.004975
ORF1ab/nsp1617M17IatGatT11B.1.258.170.000104
ORF1ab/nsp1617M17IatGatT11B.1.2600.003344
ORF1ab/nsp1617M17IatGatT11B.1.3460.001311
ORF1ab/nsp1617M17IatGatT11B.1.360.000146
ORF1ab/nsp1617M17IatGatT11B.1.36.170.000494
ORF1ab/nsp1617M17IatGatT11B.1.36.180.00042
ORF1ab/nsp1617M17IatGatT11B.1.36.80.001
ORF1ab/nsp1617M17IatGatT11B.1.4380.006536
ORF1ab/nsp1617M17IatGatT11B.1.4590.004082
ORF1ab/nsp1617M17IatGatT11B.1.5370.02
ORF1ab/nsp1617M17IatGatT11B.1.5640.000426
ORF1ab/nsp1617M17IatGatT11B.1.5820.000491
ORF1ab/nsp1617M17IatGatT11B.1.6090.000479
ORF1ab/nsp1617M17IatGatT11B.1.6120.002653
ORF1ab/nsp1617M17IatGatT11B.1.6280.000352
ORF1ab/nsp1617M17IatGatT11P.1.100.000269
ORF1ab/nsp1617M17IatGatT11P.1.150.000232
ORF1ab/nsp1617M17IatGatT11P.1.90.004808
ORF1ab/nsp1617M17IatGatT11Q.80.000165
ORF1ab/nsp1617M17IatGatT11S.10.00495