CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = L94L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1694L94LL6892LsynctGctT163413270.81211820938-20940
ORF1ab/nsp1694L94LL6892LsynctGctA16341500.091799320938-20940
ORF1ab/nsp1694L94LL6892LsynCtgTtg16341500.091799320938-20940
ORF1ab/nsp1694L94LL6892LsynctGctC163470.0042839720938-20940

Details of the mutation L94L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1694L94LctGctT13271634All0.000254
ORF1ab/nsp1694L94LCtgTtg1501634All0.000029
ORF1ab/nsp1694L94LctGctA1501634All0.000029
ORF1ab/nsp1694L94LctGctC71634All0.000001
ORF1ab/nsp1694L94LctGctT701701B.1.1.4330.998575
ORF1ab/nsp1694L94LctGctT82150B.1.1.70.000073
ORF1ab/nsp1694L94LCtgTtg48150B.1.1.70.000043
ORF1ab/nsp1694L94LctGctA20150B.1.1.70.000018
ORF1ab/nsp1694L94LctGctT6580B.1.617.20.000245
ORF1ab/nsp1694L94LCtgTtg1080B.1.617.20.000038
ORF1ab/nsp1694L94LctGctA580B.1.617.20.000019
ORF1ab/nsp1694L94LctGctT4046B.10.000366
ORF1ab/nsp1694L94LCtgTtg346B.10.000027
ORF1ab/nsp1694L94LctGctA346B.10.000027
ORF1ab/nsp1694L94LctGctT2344AY.40.000036
ORF1ab/nsp1694L94LCtgTtg1744AY.40.000026
ORF1ab/nsp1694L94LctGctA344AY.40.000005
ORF1ab/nsp1694L94LctGctC144AY.40.000002
ORF1ab/nsp1694L94LctGctT2936AY.430.000128
ORF1ab/nsp1694L94LctGctA636AY.430.000027
ORF1ab/nsp1694L94LCtgTtg136AY.430.000004
ORF1ab/nsp1694L94LctGctT2333AY.440.00014
ORF1ab/nsp1694L94LCtgTtg633AY.440.000037
ORF1ab/nsp1694L94LctGctA333AY.440.000018
ORF1ab/nsp1694L94LctGctC133AY.440.000006
ORF1ab/nsp1694L94LctGctT3333B.1.4740.062738
ORF1ab/nsp1694L94LctGctA3232B.1.177.810.006058
ORF1ab/nsp1694L94LctGctT2428B.1.10.000435
ORF1ab/nsp1694L94LctGctA228B.1.10.000036
ORF1ab/nsp1694L94LCtgTtg228B.1.10.000036
ORF1ab/nsp1694L94LctGctT2025AY.1030.000124
ORF1ab/nsp1694L94LctGctA325AY.1030.000019
ORF1ab/nsp1694L94LCtgTtg225AY.1030.000012
ORF1ab/nsp1694L94LctGctA2022AY.70.00392
ORF1ab/nsp1694L94LctGctT222AY.70.000392
ORF1ab/nsp1694L94LctGctT2020AY.420.000805
ORF1ab/nsp1694L94LCtgTtg1119B.1.4290.000259
ORF1ab/nsp1694L94LctGctT719B.1.4290.000165
ORF1ab/nsp1694L94LctGctA119B.1.4290.000024
ORF1ab/nsp1694L94LctGctT1717AY.1060.005693
ORF1ab/nsp1694L94LctGctT1617B.1.3510.000476
ORF1ab/nsp1694L94LCtgTtg117B.1.3510.00003
ORF1ab/nsp1694L94LctGctT1014AY.250.00006
ORF1ab/nsp1694L94LCtgTtg314AY.250.000018
ORF1ab/nsp1694L94LctGctA114AY.250.000006
ORF1ab/nsp1694L94LctGctT1414C.370.001625
ORF1ab/nsp1694L94LCtgTtg813B.1.2210.000568
ORF1ab/nsp1694L94LctGctA513B.1.2210.000355
ORF1ab/nsp1694L94LctGctT1313B.1.4270.000656
ORF1ab/nsp1694L94LCtgTtg511B.1.20.000044
ORF1ab/nsp1694L94LctGctT511B.1.20.000044
ORF1ab/nsp1694L94LctGctA111B.1.20.000009
ORF1ab/nsp1694L94LctGctT1010AY.1140.002311
ORF1ab/nsp1694L94LctGctT910AY.4.20.000195
ORF1ab/nsp1694L94LctGctA110AY.4.20.000022
ORF1ab/nsp1694L94LctGctT610B.1.1770.000079
ORF1ab/nsp1694L94LctGctA410B.1.1770.000053
ORF1ab/nsp1694L94LctGctA69AY.1020.000159
ORF1ab/nsp1694L94LCtgTtg19AY.1020.000027
ORF1ab/nsp1694L94LctGctT19AY.1020.000027
ORF1ab/nsp1694L94LctGctC19AY.1020.000027
ORF1ab/nsp1694L94LctGctT68AY.1190.000212
ORF1ab/nsp1694L94LctGctA28AY.1190.000071
ORF1ab/nsp1694L94LctGctT88AY.98.10.000387
ORF1ab/nsp1694L94LctGctT78B.1.2320.003761
ORF1ab/nsp1694L94LCtgTtg18B.1.2320.000537
ORF1ab/nsp1694L94LctGctT47AY.30.00004
ORF1ab/nsp1694L94LctGctA27AY.30.00002
ORF1ab/nsp1694L94LCtgTtg17AY.30.00001
ORF1ab/nsp1694L94LctGctA77AY.99.20.000645
ORF1ab/nsp1694L94LctGctT77B.1.1.3180.002112
ORF1ab/nsp1694L94LctGctT77B.1.1.3220.061404
ORF1ab/nsp1694L94LctGctT56AY.260.000142
ORF1ab/nsp1694L94LCtgTtg16AY.260.000028
ORF1ab/nsp1694L94LctGctT56AY.390.000124
ORF1ab/nsp1694L94LctGctA16AY.390.000025
ORF1ab/nsp1694L94LctGctT66B.1.5950.001566
ORF1ab/nsp1694L94LctGctT56P.10.000079
ORF1ab/nsp1694L94LctGctA16P.10.000016
ORF1ab/nsp1694L94LctGctT55B.1.177.40.001055
ORF1ab/nsp1694L94LctGctA35B.1.617.10.000387
ORF1ab/nsp1694L94LCtgTtg25B.1.617.10.000258
ORF1ab/nsp1694L94LctGctT55C.360.004554
ORF1ab/nsp1694L94LctGctA240.111111
ORF1ab/nsp1694L94LctGctT140.055556
ORF1ab/nsp1694L94LCtgTtg140.055556
ORF1ab/nsp1694L94LctGctT44AY.340.000388
ORF1ab/nsp1694L94LctGctT44AY.790.004843
ORF1ab/nsp1694L94LctGctT34B.1.2430.000209
ORF1ab/nsp1694L94LctGctA14B.1.2430.00007
ORF1ab/nsp1694L94LctGctT44B.1.351.20.00121
ORF1ab/nsp1694L94LctGctT33AY.1170.000254
ORF1ab/nsp1694L94LctGctT33AY.200.000117
ORF1ab/nsp1694L94LCtgTtg33AY.460.000312
ORF1ab/nsp1694L94LctGctA33AY.470.000093
ORF1ab/nsp1694L94LctGctT23AY.610.00021
ORF1ab/nsp1694L94LctGctA13AY.610.000105
ORF1ab/nsp1694L94LctGctT13AY.9.20.000037
ORF1ab/nsp1694L94LCtgTtg13AY.9.20.000037
ORF1ab/nsp1694L94LctGctC13AY.9.20.000037
ORF1ab/nsp1694L94LctGctT23B.1.2340.000264
ORF1ab/nsp1694L94LCtgTtg13B.1.2340.000132
ORF1ab/nsp1694L94LctGctT33B.1.36.290.001552
ORF1ab/nsp1694L94LctGctT22AY.1000.000092
ORF1ab/nsp1694L94LctGctT12AY.230.00007
ORF1ab/nsp1694L94LctGctC12AY.230.00007
ORF1ab/nsp1694L94LctGctT22AY.29.10.000441
ORF1ab/nsp1694L94LctGctT22AY.50.000041
ORF1ab/nsp1694L94LctGctT12AY.5.30.000337
ORF1ab/nsp1694L94LctGctA12AY.5.30.000337
ORF1ab/nsp1694L94LctGctT22AY.750.000112
ORF1ab/nsp1694L94LCtgTtg12AY.9.10.000084
ORF1ab/nsp1694L94LctGctT12AY.9.10.000084
ORF1ab/nsp1694L94LCtgTtg22AY.960.004149
ORF1ab/nsp1694L94LctGctA12AY.980.000079
ORF1ab/nsp1694L94LctGctT12AY.980.000079
ORF1ab/nsp1694L94LctGctT22B.1.1.2140.000111
ORF1ab/nsp1694L94LctGctT22B.1.1.2360.013793
ORF1ab/nsp1694L94LctGctT22B.1.1.700.000682
ORF1ab/nsp1694L94LctGctT22B.1.2370.00995
ORF1ab/nsp1694L94LCtgTtg22B.1.2580.000133
ORF1ab/nsp1694L94LctGctA22B.1.360.000292
ORF1ab/nsp1694L94LCtgTtg12B.1.5260.000024
ORF1ab/nsp1694L94LctGctA12B.1.5260.000024
ORF1ab/nsp1694L94LctGctT22B.1.5960.000174
ORF1ab/nsp1694L94LCtgTtg11A.10.000282
ORF1ab/nsp1694L94LctGctT11AY.1100.000113
ORF1ab/nsp1694L94LctGctT11AY.1180.000063
ORF1ab/nsp1694L94LctGctT11AY.120.10.000321
ORF1ab/nsp1694L94LctGctT11AY.1210.000135
ORF1ab/nsp1694L94LctGctA11AY.23.10.000417
ORF1ab/nsp1694L94LctGctT11AY.240.000431
ORF1ab/nsp1694L94LctGctA11AY.330.000067
ORF1ab/nsp1694L94LctGctT11AY.360.000148
ORF1ab/nsp1694L94LCtgTtg11AY.370.000316
ORF1ab/nsp1694L94LctGctA11AY.4.50.000107
ORF1ab/nsp1694L94LCtgTtg11AY.450.000122
ORF1ab/nsp1694L94LctGctT11AY.46.50.000198
ORF1ab/nsp1694L94LctGctT11AY.46.60.000072
ORF1ab/nsp1694L94LctGctT11AY.550.000917
ORF1ab/nsp1694L94LctGctT11AY.60.000041
ORF1ab/nsp1694L94LctGctA11AY.730.000665
ORF1ab/nsp1694L94LctGctT11AY.740.000116
ORF1ab/nsp1694L94LctGctA11AY.80.000606
ORF1ab/nsp1694L94LctGctT11AY.850.000427
ORF1ab/nsp1694L94LctGctT11AY.880.000884
ORF1ab/nsp1694L94LCtgTtg11AY.90.000068
ORF1ab/nsp1694L94LctGctT11AY.990.001049
ORF1ab/nsp1694L94LCtgTtg11B.1.1.10.000327
ORF1ab/nsp1694L94LCtgTtg11B.1.1.2070.001182
ORF1ab/nsp1694L94LCtgTtg11B.1.1.2220.000204
ORF1ab/nsp1694L94LctGctT11B.1.1.2820.011628
ORF1ab/nsp1694L94LctGctT11B.1.1.3060.000438
ORF1ab/nsp1694L94LctGctT11B.1.1.3170.000412
ORF1ab/nsp1694L94LctGctA11B.1.1.330.000421
ORF1ab/nsp1694L94LCtgTtg11B.1.1.3540.004386
ORF1ab/nsp1694L94LctGctT11B.1.1.390.00051
ORF1ab/nsp1694L94LCtgTtg11B.1.1.4320.001266
ORF1ab/nsp1694L94LctGctT11B.1.1.4360.025641
ORF1ab/nsp1694L94LctGctT11B.1.1.460.004367
ORF1ab/nsp1694L94LctGctT11B.1.1.5190.00004
ORF1ab/nsp1694L94LctGctT11B.1.1.540.003021
ORF1ab/nsp1694L94LctGctT11B.1.1600.000031
ORF1ab/nsp1694L94LctGctT11B.1.160.320.004292
ORF1ab/nsp1694L94LctGctT11B.1.177.120.000152
ORF1ab/nsp1694L94LctGctC11B.1.177.320.00135
ORF1ab/nsp1694L94LCtgTtg11B.1.1950.005025
ORF1ab/nsp1694L94LctGctT11B.1.2100.002132
ORF1ab/nsp1694L94LctGctT11B.1.258.140.00098
ORF1ab/nsp1694L94LCtgTtg11B.1.36.370.002778
ORF1ab/nsp1694L94LCtgTtg11B.1.416.10.001563
ORF1ab/nsp1694L94LCtgTtg11B.1.438.10.000107
ORF1ab/nsp1694L94LctGctT11B.1.466.20.000391
ORF1ab/nsp1694L94LctGctT11B.1.4670.04
ORF1ab/nsp1694L94LctGctT11B.1.596.10.009346
ORF1ab/nsp1694L94LCtgTtg11B.1.6200.000946
ORF1ab/nsp1694L94LctGctT11B.1.80.001972
ORF1ab/nsp1694L94LctGctT11C.36.30.000567
ORF1ab/nsp1694L94LctGctT11N.40.004255
ORF1ab/nsp1694L94LctGctC11P.1.150.000232
ORF1ab/nsp1694L94LctGctT11P.1.170.000162
ORF1ab/nsp1694L94LctGctT11P.20.000187
ORF1ab/nsp1694L94LCtgTtg11Q.30.000145