CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = L85L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1685L85LL6883LsynTtaCta318130850.96982120911-20913
ORF1ab/nsp1685L85LL6883LsynttAttG3181940.029550520911-20913
ORF1ab/nsp1685L85LL6883LsynTtACtT318110.00031436720911-20913
ORF1ab/nsp1685L85LL6883LsynTtACtG318110.00031436720911-20913

Details of the mutation L85L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1685L85LTtaCta30853181All0.00059
ORF1ab/nsp1685L85LttAttG943181All0.000018
ORF1ab/nsp1685L85LTtACtG13181All0
ORF1ab/nsp1685L85LTtACtT13181All0
ORF1ab/nsp1685L85LTtaCta28162819AY.370.890013
ORF1ab/nsp1685L85LttAttG32819AY.370.000948
ORF1ab/nsp1685L85LTtaCta103103B.1.617.20.000388
ORF1ab/nsp1685L85LTtaCta6668AY.40.000103
ORF1ab/nsp1685L85LttAttG268AY.40.000003
ORF1ab/nsp1685L85LttAttG3142B.1.1.70.000028
ORF1ab/nsp1685L85LTtaCta1142B.1.1.70.00001
ORF1ab/nsp1685L85LttAttG1213AY.250.000072
ORF1ab/nsp1685L85LTtaCta113AY.250.000006
ORF1ab/nsp1685L85LttAttG1011AY.200.000389
ORF1ab/nsp1685L85LTtaCta111AY.200.000039
ORF1ab/nsp1685L85LTtaCta611AY.440.000037
ORF1ab/nsp1685L85LttAttG511AY.440.00003
ORF1ab/nsp1685L85LTtaCta99AY.130.001449
ORF1ab/nsp1685L85LTtaCta99AY.240.003879
ORF1ab/nsp1685L85LTtaCta99AY.430.00004
ORF1ab/nsp1685L85LTtaCta47B.10.000037
ORF1ab/nsp1685L85LttAttG37B.10.000027
ORF1ab/nsp1685L85LttAttG36AY.1030.000019
ORF1ab/nsp1685L85LTtaCta36AY.1030.000019
ORF1ab/nsp1685L85LTtaCta55AY.390.000124
ORF1ab/nsp1685L85LTtaCta55AY.650.002665
ORF1ab/nsp1685L85LttAttG35B.1.20.000026
ORF1ab/nsp1685L85LTtaCta25B.1.20.000018
ORF1ab/nsp1685L85LTtaCta44AY.75.10.000721
ORF1ab/nsp1685L85LttAttG24B.1.1770.000026
ORF1ab/nsp1685L85LTtACtG14B.1.1770.000013
ORF1ab/nsp1685L85LTtaCta14B.1.1770.000013
ORF1ab/nsp1685L85LttAttG33AY.1010.001471
ORF1ab/nsp1685L85LttAttG23AY.30.00002
ORF1ab/nsp1685L85LTtACtT13AY.30.00001
ORF1ab/nsp1685L85LTtaCta33AY.600.002814
ORF1ab/nsp1685L85LttAttG33AY.9.20.00011
ORF1ab/nsp1685L85LTtaCta22AY.1050.001286
ORF1ab/nsp1685L85LTtaCta12AY.1170.000085
ORF1ab/nsp1685L85LttAttG12AY.1170.000085
ORF1ab/nsp1685L85LTtaCta22AY.16.10.00094
ORF1ab/nsp1685L85LTtaCta22AY.260.000057
ORF1ab/nsp1685L85LTtaCta22AY.460.000208
ORF1ab/nsp1685L85LttAttG22AY.470.000062
ORF1ab/nsp1685L85LttAttG22AY.530.000575
ORF1ab/nsp1685L85LTtaCta22AY.610.00021
ORF1ab/nsp1685L85LttAttG12B.1.1600.000031
ORF1ab/nsp1685L85LTtaCta12B.1.1600.000031
ORF1ab/nsp1685L85LttAttG12B.1.2210.000071
ORF1ab/nsp1685L85LTtaCta12B.1.2210.000071
ORF1ab/nsp1685L85LTtaCta11A.20.000662
ORF1ab/nsp1685L85LTtaCta11AY.1100.000113
ORF1ab/nsp1685L85LttAttG11AY.29.10.000221
ORF1ab/nsp1685L85LttAttG11AY.4.20.000022
ORF1ab/nsp1685L85LTtaCta11AY.520.000814
ORF1ab/nsp1685L85LTtaCta11AY.540.000095
ORF1ab/nsp1685L85LTtaCta11AY.710.000475
ORF1ab/nsp1685L85LTtaCta11AY.740.000116
ORF1ab/nsp1685L85LTtaCta11AY.750.000056
ORF1ab/nsp1685L85LTtaCta11AY.90.000068
ORF1ab/nsp1685L85LTtaCta11B0.000128
ORF1ab/nsp1685L85LttAttG11B.1.1.2220.000204
ORF1ab/nsp1685L85LTtaCta11B.1.1.4090.002833
ORF1ab/nsp1685L85LTtaCta11B.1.3810.007812
ORF1ab/nsp1685L85LTtaCta11B.1.3990.001934
ORF1ab/nsp1685L85LttAttG11B.1.4270.00005
ORF1ab/nsp1685L85LttAttG11B.1.4590.004082
ORF1ab/nsp1685L85LTtaCta11B.1.5510.00129
ORF1ab/nsp1685L85LTtaCta11D.20.000075