CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = H225del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16225H225del1H7023del1delcaTca-630.521331-21333
ORF1ab/nsp16225H225del1H7023del1delcAtc-t620.33333321331-21333
ORF1ab/nsp16225H225del1H7023del1delCat-at610.16666721331-21333

Details of the mutation H225del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16225H225del1caTca-36All0.000001
ORF1ab/nsp16225H225del1cAtc-t26All0
ORF1ab/nsp16225H225del1Cat-at16All0
ORF1ab/nsp16225H225del1Cat-at12B.1.10.000018
ORF1ab/nsp16225H225del1cAtc-t12B.1.10.000018
ORF1ab/nsp16225H225del1caTca-11AY.46.60.000072
ORF1ab/nsp16225H225del1caTca-11B.1.1.70.000001
ORF1ab/nsp16225H225del1cAtc-t11B.1.20.000009
ORF1ab/nsp16225H225del1caTca-11B.1.617.20.000004