CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A258V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16258A258VA7056VnonsyngCtgTt16431643121430-21432

Details of the mutation A258V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16258A258VgCtgTt16431643All0.000314
ORF1ab/nsp16258A258VgCtgTt783783B.1.3750.641803
ORF1ab/nsp16258A258VgCtgTt152152B.1.1390.111437
ORF1ab/nsp16258A258VgCtgTt128128B.1.1.70.000115
ORF1ab/nsp16258A258VgCtgTt5252B.1.4290.001224
ORF1ab/nsp16258A258VgCtgTt4444B.1.20.000387
ORF1ab/nsp16258A258VgCtgTt4242B.1.4080.154982
ORF1ab/nsp16258A258VgCtgTt3535B.10.000321
ORF1ab/nsp16258A258VgCtgTt3434AY.440.000207
ORF1ab/nsp16258A258VgCtgTt3131B.1.617.20.000117
ORF1ab/nsp16258A258VgCtgTt2727AY.40.000042
ORF1ab/nsp16258A258VgCtgTt2323AY.230.001604
ORF1ab/nsp16258A258VgCtgTt2121B.1.2400.004527
ORF1ab/nsp16258A258VgCtgTt1616B.1.1.5190.000635
ORF1ab/nsp16258A258VgCtgTt1616B.1.2210.001137
ORF1ab/nsp16258A258VgCtgTt1414AY.30.000139
ORF1ab/nsp16258A258VgCtgTt1414B.1.10.000254
ORF1ab/nsp16258A258VgCtgTt1212AY.1030.000075
ORF1ab/nsp16258A258VgCtgTt1111B.1.2340.001451
ORF1ab/nsp16258A258VgCtgTt1111B.1.3490.007863
ORF1ab/nsp16258A258VgCtgTt1010B.1.1770.000132
ORF1ab/nsp16258A258VgCtgTt88AY.1110.001465
ORF1ab/nsp16258A258VgCtgTt88AY.430.000035
ORF1ab/nsp16258A258VgCtgTt88B.1.351.20.002421
ORF1ab/nsp16258A258VgCtgTt77AY.390.000173
ORF1ab/nsp16258A258VgCtgTt77P.10.00011
ORF1ab/nsp16258A258VgCtgTt66B.1.1.3170.00247
ORF1ab/nsp16258A258VgCtgTt55AY.290.000079
ORF1ab/nsp16258A258VgCtgTt55AY.60.000206
ORF1ab/nsp16258A258VgCtgTt55AY.98.10.000242
ORF1ab/nsp16258A258VgCtgTt55B.1.1.2630.007788
ORF1ab/nsp16258A258VgCtgTt44AY.99.20.000369
ORF1ab/nsp16258A258VgCtgTt44B.1.177.40.000844
ORF1ab/nsp16258A258VgCtgTt44B.1.3670.00317
ORF1ab/nsp16258A258VgCtgTt44P.20.000747
ORF1ab/nsp16258A258VgCtgTt33AY.200.000117
ORF1ab/nsp16258A258VgCtgTt33AY.50.000062
ORF1ab/nsp16258A258VgCtgTt33B.1.1.3890.018182
ORF1ab/nsp16258A258VgCtgTt33B.1.3110.000824
ORF1ab/nsp16258A258VgCtgTt33B.1.4270.000151
ORF1ab/nsp16258A258VgCtgTt33B.1.5750.00091
ORF1ab/nsp16258A258VgCtgTt33B.1.5960.000261
ORF1ab/nsp16258A258VgCtgTt33B.1.617.10.000387
ORF1ab/nsp16258A258VgCtgTt33B.1.6370.000219
ORF1ab/nsp16258A258VgCtgTt22AY.1060.00067
ORF1ab/nsp16258A258VgCtgTt22AY.1160.000574
ORF1ab/nsp16258A258VgCtgTt22AY.1190.000071
ORF1ab/nsp16258A258VgCtgTt22AY.250.000012
ORF1ab/nsp16258A258VgCtgTt22AY.260.000057
ORF1ab/nsp16258A258VgCtgTt22B.1.160.280.005848
ORF1ab/nsp16258A258VgCtgTt22B.1.1950.01005
ORF1ab/nsp16258A258VgCtgTt22B.1.2430.000139
ORF1ab/nsp16258A258VgCtgTt22B.1.36.70.008
ORF1ab/nsp16258A258VgCtgTt22B.1.416.10.003125
ORF1ab/nsp16258A258VgCtgTt11A.2.50.000499
ORF1ab/nsp16258A258VgCtgTt11AE.80.000489
ORF1ab/nsp16258A258VgCtgTt11AY.10.000396
ORF1ab/nsp16258A258VgCtgTt11AY.1000.000046
ORF1ab/nsp16258A258VgCtgTt11AY.1010.00049
ORF1ab/nsp16258A258VgCtgTt11AY.1020.000027
ORF1ab/nsp16258A258VgCtgTt11AY.130.000161
ORF1ab/nsp16258A258VgCtgTt11AY.3.10.000085
ORF1ab/nsp16258A258VgCtgTt11AY.340.000097
ORF1ab/nsp16258A258VgCtgTt11AY.4.2.10.000149
ORF1ab/nsp16258A258VgCtgTt11AY.520.000814
ORF1ab/nsp16258A258VgCtgTt11AY.690.000187
ORF1ab/nsp16258A258VgCtgTt11AY.980.000079
ORF1ab/nsp16258A258VgCtgTt11B.1.1.1980.001468
ORF1ab/nsp16258A258VgCtgTt11B.1.1.2220.000204
ORF1ab/nsp16258A258VgCtgTt11B.1.1.2280.003049
ORF1ab/nsp16258A258VgCtgTt11B.1.1.250.000569
ORF1ab/nsp16258A258VgCtgTt11B.1.1.2770.000759
ORF1ab/nsp16258A258VgCtgTt11B.1.1.2800.003086
ORF1ab/nsp16258A258VgCtgTt11B.1.1.3960.045455
ORF1ab/nsp16258A258VgCtgTt11B.1.1600.000031
ORF1ab/nsp16258A258VgCtgTt11B.1.177.210.000076
ORF1ab/nsp16258A258VgCtgTt11B.1.177.410.0025
ORF1ab/nsp16258A258VgCtgTt11B.1.177.450.000381
ORF1ab/nsp16258A258VgCtgTt11B.1.177.600.000218
ORF1ab/nsp16258A258VgCtgTt11B.1.3360.002439
ORF1ab/nsp16258A258VgCtgTt11B.1.3500.002933
ORF1ab/nsp16258A258VgCtgTt11B.1.3510.00003
ORF1ab/nsp16258A258VgCtgTt11B.1.3690.000285
ORF1ab/nsp16258A258VgCtgTt11B.1.3820.008929
ORF1ab/nsp16258A258VgCtgTt11B.1.4160.001269
ORF1ab/nsp16258A258VgCtgTt11B.1.4280.00102
ORF1ab/nsp16258A258VgCtgTt11B.1.5250.000113
ORF1ab/nsp16258A258VgCtgTt11B.1.5610.000397
ORF1ab/nsp16258A258VgCtgTt11B.1.564.10.001577
ORF1ab/nsp16258A258VgCtgTt11B.1.5650.00081
ORF1ab/nsp16258A258VgCtgTt11B.1.5760.000907
ORF1ab/nsp16258A258VgCtgTt11B.1.5890.007576
ORF1ab/nsp16258A258VgCtgTt11P.1.140.000048
ORF1ab/nsp16258A258VgCtgTt11R.10.00009