CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A188T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16188A188TA6986TnonsynGcaAca3553540.99718321220-21222
ORF1ab/nsp16188A188TA6986TnonsynGcAAcT35510.002816921220-21222

Details of the mutation A188T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16188A188TGcaAca354355All0.000068
ORF1ab/nsp16188A188TGcAAcT1355All0
ORF1ab/nsp16188A188TGcaAca8383AY.40.000129
ORF1ab/nsp16188A188TGcaAca3434B.1.1.70.00003
ORF1ab/nsp16188A188TGcaAca3434B.1.20.000299
ORF1ab/nsp16188A188TGcaAca2121B.1.6090.010067
ORF1ab/nsp16188A188TGcaAca1818P.1.140.00086
ORF1ab/nsp16188A188TGcaAca1717B.1.617.20.000064
ORF1ab/nsp16188A188TGcaAca1515B.1.1.5180.094937
ORF1ab/nsp16188A188TGcaAca1314AY.30.000129
ORF1ab/nsp16188A188TGcAAcT114AY.30.00001
ORF1ab/nsp16188A188TGcaAca1010AY.430.000044
ORF1ab/nsp16188A188TGcaAca88AY.1020.000212
ORF1ab/nsp16188A188TGcaAca88B.10.000073
ORF1ab/nsp16188A188TGcaAca88B.1.3510.000238
ORF1ab/nsp16188A188TGcaAca66AY.250.000036
ORF1ab/nsp16188A188TGcaAca55B.1.10.000091
ORF1ab/nsp16188A188TGcaAca55B.1.2430.000348
ORF1ab/nsp16188A188TGcaAca55P.10.000079
ORF1ab/nsp16188A188TGcaAca44AY.450.000487
ORF1ab/nsp16188A188TGcaAca44AY.470.000124
ORF1ab/nsp16188A188TGcaAca33AY.850.001282
ORF1ab/nsp16188A188TGcaAca33B.1.2580.0002
ORF1ab/nsp16188A188TGcaAca22AY.1030.000012
ORF1ab/nsp16188A188TGcaAca22AY.1190.000071
ORF1ab/nsp16188A188TGcaAca22B.1.1.1760.000879
ORF1ab/nsp16188A188TGcaAca22B.1.2210.000142
ORF1ab/nsp16188A188TGcaAca22B.1.2340.000264
ORF1ab/nsp16188A188TGcaAca22B.1.4040.002604
ORF1ab/nsp16188A188TGcaAca22B.1.4290.000047
ORF1ab/nsp16188A188TGcaAca22B.60.00182
ORF1ab/nsp16188A188TGcaAca11A.23.10.000704
ORF1ab/nsp16188A188TGcaAca11AU.20.002421
ORF1ab/nsp16188A188TGcaAca11AY.1140.000231
ORF1ab/nsp16188A188TGcaAca11AY.1170.000085
ORF1ab/nsp16188A188TGcaAca11AY.1200.000037
ORF1ab/nsp16188A188TGcaAca11AY.290.000016
ORF1ab/nsp16188A188TGcaAca11AY.320.000532
ORF1ab/nsp16188A188TGcaAca11AY.330.000067
ORF1ab/nsp16188A188TGcaAca11AY.440.000006
ORF1ab/nsp16188A188TGcaAca11AY.460.000104
ORF1ab/nsp16188A188TGcaAca11AY.5.30.000337
ORF1ab/nsp16188A188TGcaAca11AY.610.000105
ORF1ab/nsp16188A188TGcaAca11AY.630.000387
ORF1ab/nsp16188A188TGcaAca11AY.9.20.000037
ORF1ab/nsp16188A188TGcaAca11AY.930.000273
ORF1ab/nsp16188A188TGcaAca11AY.98.10.000048
ORF1ab/nsp16188A188TGcaAca11B.1.1.1010.01
ORF1ab/nsp16188A188TGcaAca11B.1.1.1420.017544
ORF1ab/nsp16188A188TGcaAca11B.1.1.2220.000204
ORF1ab/nsp16188A188TGcaAca11B.1.1.3060.000438
ORF1ab/nsp16188A188TGcaAca11B.1.1.330.000421
ORF1ab/nsp16188A188TGcaAca11B.1.1.3770.001381
ORF1ab/nsp16188A188TGcaAca11B.1.1.5190.00004
ORF1ab/nsp16188A188TGcaAca11B.1.1600.000031
ORF1ab/nsp16188A188TGcaAca11B.1.1770.000013
ORF1ab/nsp16188A188TGcaAca11B.1.177.650.000665
ORF1ab/nsp16188A188TGcaAca11B.1.2600.003344
ORF1ab/nsp16188A188TGcaAca11B.1.3200.001245
ORF1ab/nsp16188A188TGcaAca11B.1.351.20.000303
ORF1ab/nsp16188A188TGcaAca11B.1.416.10.001563
ORF1ab/nsp16188A188TGcaAca11B.1.4970.000315
ORF1ab/nsp16188A188TGcaAca11B.1.5260.000024
ORF1ab/nsp16188A188TGcaAca11B.1.6210.000089
ORF1ab/nsp16188A188TGcaAca11B.1.910.002075