CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A188S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16188A188SA6986SnonsynGcaTca563456330.99982221220-21222
ORF1ab/nsp16188A188SA6986SnonsynGcATcC563410.00017749421220-21222

Details of the mutation A188S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16188A188SGcaTca56335634All0.001077
ORF1ab/nsp16188A188SGcATcC15634All0
ORF1ab/nsp16188A188SGcaTca23282328AY.40.003623
ORF1ab/nsp16188A188SGcaTca609609B.1.1.70.000545
ORF1ab/nsp16188A188SGcaTca327327AW.10.996951
ORF1ab/nsp16188A188SGcaTca300300AY.440.001826
ORF1ab/nsp16188A188SGcaTca266266B.1.617.20.001002
ORF1ab/nsp16188A188SGcaTca193193AY.430.000855
ORF1ab/nsp16188A188SGcaTca127127B.1.1770.001672
ORF1ab/nsp16188A188SGcaTca9393B.1.20.000819
ORF1ab/nsp16188A188SGcaTca8686AY.980.006794
ORF1ab/nsp16188A188SGcaTca8181AY.1030.000503
ORF1ab/nsp16188A188SGcaTca7777AY.50.00159
ORF1ab/nsp16188A188SGcaTca7171B.1.177.860.013025
ORF1ab/nsp16188A188SGcaTca6868AY.1020.001803
ORF1ab/nsp16188A188SGcaTca6363B.1.1600.001965
ORF1ab/nsp16188A188SGcaTca6363B.1.4040.082031
ORF1ab/nsp16188A188SGcaTca5555B.1.2210.003907
ORF1ab/nsp16188A188SGcaTca5353C.350.041022
ORF1ab/nsp16188A188SGcaTca4848B.1.1.3720.033058
ORF1ab/nsp16188A188SGcaTca4444B.10.000403
ORF1ab/nsp16188A188SGcaTca4343B.1.3110.011807
ORF1ab/nsp16188A188SGcaTca2626AY.340.002521
ORF1ab/nsp16188A188SGcaTca2424AY.46.10.024641
ORF1ab/nsp16188A188SGcaTca2323AY.200.000894
ORF1ab/nsp16188A188SGcaTca2222AY.90.001487
ORF1ab/nsp16188A188SGcaTca1919AY.250.000114
ORF1ab/nsp16188A188SGcaTca1919AY.390.00047
ORF1ab/nsp16188A188SGcaTca1919B.1.177.610.826087
ORF1ab/nsp16188A188SGcaTca1818AY.220.037657
ORF1ab/nsp16188A188SGcaTca1818AY.4.20.00039
ORF1ab/nsp16188A188SGcaTca1616AY.290.000252
ORF1ab/nsp16188A188SGcaTca1616B.1.10.00029
ORF1ab/nsp16188A188SGcaTca1515B.1.177.530.035885
ORF1ab/nsp16188A188SGcaTca1515B.1.2580.000998
ORF1ab/nsp16188A188SGcaTca1313P.10.000205
ORF1ab/nsp16188A188SGcaTca1212AY.39.10.000475
ORF1ab/nsp16188A188SGcaTca1212B.1.3510.000357
ORF1ab/nsp16188A188SGcaTca1212B.1.36.290.006208
ORF1ab/nsp16188A188SGcaTca1111B.1.1.5190.000437
ORF1ab/nsp16188A188SGcaTca1010AY.4.50.001075
ORF1ab/nsp16188A188SGcaTca1010B.1.1.4640.014728
ORF1ab/nsp16188A188SGcaTca99AY.30.00009
ORF1ab/nsp16188A188SGcaTca99AY.760.043478
ORF1ab/nsp16188A188SGcaTca89AY.9.20.000294
ORF1ab/nsp16188A188SGcATcC19AY.9.20.000037
ORF1ab/nsp16188A188SGcaTca99B.1.3460.011796
ORF1ab/nsp16188A188SGcaTca88B.1.1.3060.003507
ORF1ab/nsp16188A188SGcaTca88B.1.1.3170.003294
ORF1ab/nsp16188A188SGcaTca88B.1.177.40.001688
ORF1ab/nsp16188A188SGcaTca88B.1.2430.000557
ORF1ab/nsp16188A188SGcaTca88B.1.4800.0199
ORF1ab/nsp16188A188SGcaTca77AY.330.000467
ORF1ab/nsp16188A188SGcaTca77B.1.360.001021
ORF1ab/nsp16188A188SGcaTca77C.270.12963
ORF1ab/nsp16188A188SGcaTca77P.20.001306
ORF1ab/nsp16188A188SGcaTca66AY.1000.000276
ORF1ab/nsp16188A188SGcaTca66AY.260.00017
ORF1ab/nsp16188A188SGcaTca66D.20.00045
ORF1ab/nsp16188A188SGcaTca66R.10.00054
ORF1ab/nsp16188A188SGcaTca55AY.540.000477
ORF1ab/nsp16188A188SGcaTca55AY.60.000206
ORF1ab/nsp16188A188SGcaTca55B.1.6200.00473
ORF1ab/nsp16188A188SGcaTca44AY.1060.00134
ORF1ab/nsp16188A188SGcaTca44AY.1180.000251
ORF1ab/nsp16188A188SGcaTca44AY.230.000279
ORF1ab/nsp16188A188SGcaTca44AY.360.000593
ORF1ab/nsp16188A188SGcaTca44AY.450.000487
ORF1ab/nsp16188A188SGcaTca44AY.460.000416
ORF1ab/nsp16188A188SGcaTca44AY.46.60.000289
ORF1ab/nsp16188A188SGcaTca44AY.700.000834
ORF1ab/nsp16188A188SGcaTca44AY.850.001709
ORF1ab/nsp16188A188SGcaTca44AY.890.019608
ORF1ab/nsp16188A188SGcaTca33AY.1210.000406
ORF1ab/nsp16188A188SGcaTca33AY.20.001068
ORF1ab/nsp16188A188SGcaTca33AY.300.001187
ORF1ab/nsp16188A188SGcaTca33AY.420.000121
ORF1ab/nsp16188A188SGcaTca33AY.530.000863
ORF1ab/nsp16188A188SGcaTca33AY.630.001161
ORF1ab/nsp16188A188SGcaTca33AY.920.000862
ORF1ab/nsp16188A188SGcaTca33B.1.1.2160.002671
ORF1ab/nsp16188A188SGcaTca33B.1.1.2360.02069
ORF1ab/nsp16188A188SGcaTca33B.1.36.100.014354
ORF1ab/nsp16188A188SGcaTca33B.1.5260.000071
ORF1ab/nsp16188A188SGcaTca22AY.10.000791
ORF1ab/nsp16188A188SGcaTca22AY.46.20.001271
ORF1ab/nsp16188A188SGcaTca22AY.470.000062
ORF1ab/nsp16188A188SGcaTca22AY.610.00021
ORF1ab/nsp16188A188SGcaTca22AY.780.003082
ORF1ab/nsp16188A188SGcaTca22AY.98.10.000097
ORF1ab/nsp16188A188SGcaTca22AZ.20.001642
ORF1ab/nsp16188A188SGcaTca22B.1.1.1480.017544
ORF1ab/nsp16188A188SGcaTca22B.1.1.1980.002937
ORF1ab/nsp16188A188SGcaTca22B.1.1.2220.000408
ORF1ab/nsp16188A188SGcaTca22B.1.1.4320.002532
ORF1ab/nsp16188A188SGcaTca22B.1.110.30.001437
ORF1ab/nsp16188A188SGcaTca22B.1.1660.016949
ORF1ab/nsp16188A188SGcaTca22B.1.177.730.001133
ORF1ab/nsp16188A188SGcaTca22B.1.4290.000047
ORF1ab/nsp16188A188SGcaTca22B.1.617.10.000258
ORF1ab/nsp16188A188SGcaTca22P.1.140.000096
ORF1ab/nsp16188A188SGcaTca22P.1.17.10.00175
ORF1ab/nsp16188A188SGcaTca11A.2.50.000499
ORF1ab/nsp16188A188SGcaTca11A.23.10.000704
ORF1ab/nsp16188A188SGcaTca11A.250.018182
ORF1ab/nsp16188A188SGcaTca11AL.10.012987
ORF1ab/nsp16188A188SGcaTca11AY.1050.000643
ORF1ab/nsp16188A188SGcaTca11AY.1100.000113
ORF1ab/nsp16188A188SGcaTca11AY.1140.000231
ORF1ab/nsp16188A188SGcaTca11AY.116.10.000311
ORF1ab/nsp16188A188SGcaTca11AY.1190.000035
ORF1ab/nsp16188A188SGcaTca11AY.1200.000037
ORF1ab/nsp16188A188SGcaTca11AY.140.000088
ORF1ab/nsp16188A188SGcaTca11AY.240.000431
ORF1ab/nsp16188A188SGcaTca11AY.3.10.000085
ORF1ab/nsp16188A188SGcaTca11AY.39.1.10.000725
ORF1ab/nsp16188A188SGcaTca11AY.4.30.000842
ORF1ab/nsp16188A188SGcaTca11AY.4.40.000409
ORF1ab/nsp16188A188SGcaTca11AY.46.50.000198
ORF1ab/nsp16188A188SGcaTca11AY.590.00053
ORF1ab/nsp16188A188SGcaTca11AY.7.10.000113
ORF1ab/nsp16188A188SGcaTca11AY.750.000056
ORF1ab/nsp16188A188SGcaTca11AY.99.20.000092
ORF1ab/nsp16188A188SGcaTca11B0.000128
ORF1ab/nsp16188A188SGcaTca11B.1.1.1700.001247
ORF1ab/nsp16188A188SGcaTca11B.1.1.2140.000055
ORF1ab/nsp16188A188SGcaTca11B.1.1.250.000569
ORF1ab/nsp16188A188SGcaTca11B.1.1.2860.002899
ORF1ab/nsp16188A188SGcaTca11B.1.1.700.000341
ORF1ab/nsp16188A188SGcaTca11B.1.1190.010526
ORF1ab/nsp16188A188SGcaTca11B.1.1590.012195
ORF1ab/nsp16188A188SGcaTca11B.1.177.430.001477
ORF1ab/nsp16188A188SGcaTca11B.1.177.70.000165
ORF1ab/nsp16188A188SGcaTca11B.1.177.830.001481
ORF1ab/nsp16188A188SGcaTca11B.1.2340.000132
ORF1ab/nsp16188A188SGcaTca11B.1.351.20.000303
ORF1ab/nsp16188A188SGcaTca11B.1.351.50.0006
ORF1ab/nsp16188A188SGcaTca11B.1.36.10.00114
ORF1ab/nsp16188A188SGcaTca11B.1.36.170.000494
ORF1ab/nsp16188A188SGcaTca11B.1.36.70.004
ORF1ab/nsp16188A188SGcaTca11B.1.3750.00082
ORF1ab/nsp16188A188SGcaTca11B.1.3970.004854
ORF1ab/nsp16188A188SGcaTca11B.1.4000.000429
ORF1ab/nsp16188A188SGcaTca11B.1.4160.001269
ORF1ab/nsp16188A188SGcaTca11B.1.4270.00005
ORF1ab/nsp16188A188SGcaTca11B.1.5090.000866
ORF1ab/nsp16188A188SGcaTca11B.1.5380.008065
ORF1ab/nsp16188A188SGcaTca11B.1.5640.000426
ORF1ab/nsp16188A188SGcaTca11B.1.810.021277
ORF1ab/nsp16188A188SGcaTca11B.1.9.30.038462
ORF1ab/nsp16188A188SGcaTca11B.6.60.000889
ORF1ab/nsp16188A188SGcaTca11C.370.000116
ORF1ab/nsp16188A188SGcaTca11L.30.003546
ORF1ab/nsp16188A188SGcaTca11P.1.120.000484
ORF1ab/nsp16188A188SGcaTca11P.30.001595
ORF1ab/nsp16188A188SGcaTca11P.70.004367
ORF1ab/nsp16188A188SGcaTca11Q.10.000126
ORF1ab/nsp16188A188SGcaTca11Q.40.000455
ORF1ab/nsp16188A188SGcaTca11U.10.012821