CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A188A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16188A188AA6986AsyngcAgcT690160920.88277121220-21222
ORF1ab/nsp16188A188AA6986AsyngcAgcG69017950.11520121220-21222
ORF1ab/nsp16188A188AA6986AsyngcAgcC6901140.0020286921220-21222

Details of the mutation A188A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16188A188AgcAgcT60926901All0.001165
ORF1ab/nsp16188A188AgcAgcG7956901All0.000152
ORF1ab/nsp16188A188AgcAgcC146901All0.000003
ORF1ab/nsp16188A188AgcAgcT49964996B.1.177.810.945854
ORF1ab/nsp16188A188AgcAgcT488489B.1.1770.006426
ORF1ab/nsp16188A188AgcAgcG1489B.1.1770.000013
ORF1ab/nsp16188A188AgcAgcT339339Z.10.979769
ORF1ab/nsp16188A188AgcAgcT199199B.1.177.500.934272
ORF1ab/nsp16188A188AgcAgcG162162AY.40.000252
ORF1ab/nsp16188A188AgcAgcG141143B.1.617.20.000531
ORF1ab/nsp16188A188AgcAgcC2143B.1.617.20.000008
ORF1ab/nsp16188A188AgcAgcG106106B.1.2340.013986
ORF1ab/nsp16188A188AgcAgcG9698AY.440.000584
ORF1ab/nsp16188A188AgcAgcT298AY.440.000012
ORF1ab/nsp16188A188AgcAgcG9394AY.430.000412
ORF1ab/nsp16188A188AgcAgcC194AY.430.000004
ORF1ab/nsp16188A188AgcAgcG2835B.1.1.70.000025
ORF1ab/nsp16188A188AgcAgcC435B.1.1.70.000004
ORF1ab/nsp16188A188AgcAgcT335B.1.1.70.000003
ORF1ab/nsp16188A188AgcAgcT1119B.10.000101
ORF1ab/nsp16188A188AgcAgcG819B.10.000073
ORF1ab/nsp16188A188AgcAgcG1616AY.34.10.008159
ORF1ab/nsp16188A188AgcAgcG1414B.1.5610.005558
ORF1ab/nsp16188A188AgcAgcG1313AY.390.000321
ORF1ab/nsp16188A188AgcAgcT613B.1.10.000109
ORF1ab/nsp16188A188AgcAgcG513B.1.10.000091
ORF1ab/nsp16188A188AgcAgcC213B.1.10.000036
ORF1ab/nsp16188A188AgcAgcT911B.1.20.000079
ORF1ab/nsp16188A188AgcAgcG211B.1.20.000018
ORF1ab/nsp16188A188AgcAgcG710AY.30.00007
ORF1ab/nsp16188A188AgcAgcT310AY.30.00003
ORF1ab/nsp16188A188AgcAgcG1010AY.750.00056
ORF1ab/nsp16188A188AgcAgcG99AY.1030.000056
ORF1ab/nsp16188A188AgcAgcG88B.1.5390.140351
ORF1ab/nsp16188A188AgcAgcG77Q.70.007778
ORF1ab/nsp16188A188AgcAgcG66AY.250.000036
ORF1ab/nsp16188A188AgcAgcG66B.1.5250.000679
ORF1ab/nsp16188A188AgcAgcT44B.1.177.720.013559
ORF1ab/nsp16188A188AgcAgcT33AY.1170.000254
ORF1ab/nsp16188A188AgcAgcG33AY.230.000209
ORF1ab/nsp16188A188AgcAgcT33AY.330.0002
ORF1ab/nsp16188A188AgcAgcG33AY.4.20.000065
ORF1ab/nsp16188A188AgcAgcG33AY.770.003382
ORF1ab/nsp16188A188AgcAgcT33B0.000383
ORF1ab/nsp16188A188AgcAgcG33B.1.2580.0002
ORF1ab/nsp16188A188AgcAgcG33B.1.4290.000071
ORF1ab/nsp16188A188AgcAgcG33B.1.5240.004219
ORF1ab/nsp16188A188AgcAgcG13P.10.000016
ORF1ab/nsp16188A188AgcAgcT13P.10.000016
ORF1ab/nsp16188A188AgcAgcC13P.10.000016
ORF1ab/nsp16188A188AgcAgcT22AY.1200.000074
ORF1ab/nsp16188A188AgcAgcG22AY.4.50.000215
ORF1ab/nsp16188A188AgcAgcG22B.1.1420.005797
ORF1ab/nsp16188A188AgcAgcC12B.1.1600.000031
ORF1ab/nsp16188A188AgcAgcT12B.1.1600.000031
ORF1ab/nsp16188A188AgcAgcT22B.1.177.310.022989
ORF1ab/nsp16188A188AgcAgcG12B.1.177.860.000183
ORF1ab/nsp16188A188AgcAgcT12B.1.177.860.000183
ORF1ab/nsp16188A188AgcAgcG22C.370.000232
ORF1ab/nsp16188A188AgcAgcG22P.20.000373
ORF1ab/nsp16188A188AgcAgcG11AY.1130.000142
ORF1ab/nsp16188A188AgcAgcG11AY.1190.000035
ORF1ab/nsp16188A188AgcAgcG11AY.1210.000135
ORF1ab/nsp16188A188AgcAgcT11AY.270.000065
ORF1ab/nsp16188A188AgcAgcG11AY.290.000016
ORF1ab/nsp16188A188AgcAgcG11AY.300.000396
ORF1ab/nsp16188A188AgcAgcC11AY.39.10.00004
ORF1ab/nsp16188A188AgcAgcG11AY.470.000031
ORF1ab/nsp16188A188AgcAgcG11AY.50.000021
ORF1ab/nsp16188A188AgcAgcG11AY.5.40.000277
ORF1ab/nsp16188A188AgcAgcG11AY.740.000116
ORF1ab/nsp16188A188AgcAgcG11AY.9.20.000037
ORF1ab/nsp16188A188AgcAgcG11AY.920.000287
ORF1ab/nsp16188A188AgcAgcG11AY.99.20.000092
ORF1ab/nsp16188A188AgcAgcG11B.1.1.1940.00495
ORF1ab/nsp16188A188AgcAgcT11B.1.1.2220.000204
ORF1ab/nsp16188A188AgcAgcG11B.1.1.330.000421
ORF1ab/nsp16188A188AgcAgcT11B.1.1.3720.000689
ORF1ab/nsp16188A188AgcAgcG11B.1.1.4110.014706
ORF1ab/nsp16188A188AgcAgcG11B.1.1.5230.001563
ORF1ab/nsp16188A188AgcAgcG11B.1.1.700.000341
ORF1ab/nsp16188A188AgcAgcG11B.1.177.210.000076
ORF1ab/nsp16188A188AgcAgcT11B.1.177.350.000691
ORF1ab/nsp16188A188AgcAgcG11B.1.177.40.000211
ORF1ab/nsp16188A188AgcAgcT11B.1.177.650.000665
ORF1ab/nsp16188A188AgcAgcT11B.1.177.750.001041
ORF1ab/nsp16188A188AgcAgcT11B.1.177.760.002494
ORF1ab/nsp16188A188AgcAgcG11B.1.1950.005025
ORF1ab/nsp16188A188AgcAgcG11B.1.2210.000071
ORF1ab/nsp16188A188AgcAgcT11B.1.2400.000216
ORF1ab/nsp16188A188AgcAgcT11B.1.2430.00007
ORF1ab/nsp16188A188AgcAgcT11B.1.258.170.000104
ORF1ab/nsp16188A188AgcAgcT11B.1.258.210.007752
ORF1ab/nsp16188A188AgcAgcG11B.1.258.220.002667
ORF1ab/nsp16188A188AgcAgcT11B.1.3240.001605
ORF1ab/nsp16188A188AgcAgcT11B.1.3510.00003
ORF1ab/nsp16188A188AgcAgcG11B.1.360.000146
ORF1ab/nsp16188A188AgcAgcC11B.1.36.80.001
ORF1ab/nsp16188A188AgcAgcG11B.1.3750.00082
ORF1ab/nsp16188A188AgcAgcG11B.1.4560.003268
ORF1ab/nsp16188A188AgcAgcG11B.1.4590.004082
ORF1ab/nsp16188A188AgcAgcT11B.1.466.20.000391
ORF1ab/nsp16188A188AgcAgcT11B.1.5260.000024
ORF1ab/nsp16188A188AgcAgcG11B.1.595.40.007299
ORF1ab/nsp16188A188AgcAgcT11B.1.6090.000479
ORF1ab/nsp16188A188AgcAgcC11B.1.6370.000073
ORF1ab/nsp16188A188AgcAgcG11P.1.150.000232
ORF1ab/nsp16188A188AgcAgcG11P.1.20.001156