CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A116del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16116A116delA6914deldelGCA---5151121004-21006

Details of the mutation A116del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16116A116delGCA---5151All0.00001
ORF1ab/nsp16116A116delGCA---1717B.1.1.70.000015
ORF1ab/nsp16116A116delGCA---55AY.250.00003
ORF1ab/nsp16116A116delGCA---33AY.40.000005
ORF1ab/nsp16116A116delGCA---33P.1.150.000697
ORF1ab/nsp16116A116delGCA---220.111111
ORF1ab/nsp16116A116delGCA---22AY.4.50.000215
ORF1ab/nsp16116A116delGCA---22AY.430.000009
ORF1ab/nsp16116A116delGCA---22B.1.617.20.000008
ORF1ab/nsp16116A116delGCA---11AD.20.000219
ORF1ab/nsp16116A116delGCA---11AY.1200.000037
ORF1ab/nsp16116A116delGCA---11AY.330.000067
ORF1ab/nsp16116A116delGCA---11AY.360.000148
ORF1ab/nsp16116A116delGCA---11B.10.000009
ORF1ab/nsp16116A116delGCA---11B.1.1.700.000341
ORF1ab/nsp16116A116delGCA---11B.1.177.620.001192
ORF1ab/nsp16116A116delGCA---11B.1.177.70.000165
ORF1ab/nsp16116A116delGCA---11B.1.177.90.001332
ORF1ab/nsp16116A116delGCA---11B.1.2580.000067
ORF1ab/nsp16116A116delGCA---11B.1.258.110.000396
ORF1ab/nsp16116A116delGCA---11B.1.36.290.000517
ORF1ab/nsp16116A116delGCA---11B.1.5250.000113
ORF1ab/nsp16116A116delGCA---11B.1.6200.000946
ORF1ab/nsp16116A116delGCA---11Q.20.000613