CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : Mut = A116A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16116A116AA6914AsyngcAgcG7696560.85305621004-21006
ORF1ab/nsp16116A116AA6914AsyngcAgcT769970.12613821004-21006
ORF1ab/nsp16116A116AA6914AsyngcAgcC769160.020806221004-21006

Details of the mutation A116A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16116A116AgcAgcG656769All0.000125
ORF1ab/nsp16116A116AgcAgcT97769All0.000019
ORF1ab/nsp16116A116AgcAgcC16769All0.000003
ORF1ab/nsp16116A116AgcAgcG508519B.1.1.70.000455
ORF1ab/nsp16116A116AgcAgcT11519B.1.1.70.00001
ORF1ab/nsp16116A116AgcAgcT4652AY.39.10.001822
ORF1ab/nsp16116A116AgcAgcG652AY.39.10.000238
ORF1ab/nsp16116A116AgcAgcG4445AY.390.001087
ORF1ab/nsp16116A116AgcAgcT145AY.390.000025
ORF1ab/nsp16116A116AgcAgcG1818B.1.6210.001593
ORF1ab/nsp16116A116AgcAgcG1516P.10.000236
ORF1ab/nsp16116A116AgcAgcC116P.10.000016
ORF1ab/nsp16116A116AgcAgcG910AY.30.00009
ORF1ab/nsp16116A116AgcAgcT110AY.30.00001
ORF1ab/nsp16116A116AgcAgcG89AY.1020.000212
ORF1ab/nsp16116A116AgcAgcT19AY.1020.000027
ORF1ab/nsp16116A116AgcAgcG69AY.40.000009
ORF1ab/nsp16116A116AgcAgcT39AY.40.000005
ORF1ab/nsp16116A116AgcAgcT88B.6.80.066116
ORF1ab/nsp16116A116AgcAgcG67AY.1030.000037
ORF1ab/nsp16116A116AgcAgcC17AY.1030.000006
ORF1ab/nsp16116A116AgcAgcT47AY.440.000024
ORF1ab/nsp16116A116AgcAgcG37AY.440.000018
ORF1ab/nsp16116A116AgcAgcC360.166667
ORF1ab/nsp16116A116AgcAgcT360.166667
ORF1ab/nsp16116A116AgcAgcG66C.370.000696
ORF1ab/nsp16116A116AgcAgcC34AY.1200.000112
ORF1ab/nsp16116A116AgcAgcG14AY.1200.000037
ORF1ab/nsp16116A116AgcAgcG44B.1.4710.010929
ORF1ab/nsp16116A116AgcAgcT24B.1.617.20.000008
ORF1ab/nsp16116A116AgcAgcC14B.1.617.20.000004
ORF1ab/nsp16116A116AgcAgcG14B.1.617.20.000004
ORF1ab/nsp16116A116AgcAgcG22AY.260.000057
ORF1ab/nsp16116A116AgcAgcC12AY.50.000021
ORF1ab/nsp16116A116AgcAgcG12AY.50.000021
ORF1ab/nsp16116A116AgcAgcG22B.10.000018
ORF1ab/nsp16116A116AgcAgcT22B.1.1.2310.006192
ORF1ab/nsp16116A116AgcAgcG22B.1.1.3890.012121
ORF1ab/nsp16116A116AgcAgcC12B.1.2210.000071
ORF1ab/nsp16116A116AgcAgcT12B.1.2210.000071
ORF1ab/nsp16116A116AgcAgcC22B.1.3510.000059
ORF1ab/nsp16116A116AgcAgcG22B.1.4260.002018
ORF1ab/nsp16116A116AgcAgcG22B.1.5260.000047
ORF1ab/nsp16116A116AgcAgcC11A.2.40.003367
ORF1ab/nsp16116A116AgcAgcG11AY.16.10.00047
ORF1ab/nsp16116A116AgcAgcT11AY.20.000356
ORF1ab/nsp16116A116AgcAgcG11AY.230.00007
ORF1ab/nsp16116A116AgcAgcT11AY.250.000006
ORF1ab/nsp16116A116AgcAgcG11AY.330.000067
ORF1ab/nsp16116A116AgcAgcT11AY.4.20.000022
ORF1ab/nsp16116A116AgcAgcT11AY.430.000004
ORF1ab/nsp16116A116AgcAgcG11AY.450.000122
ORF1ab/nsp16116A116AgcAgcG11AY.460.000104
ORF1ab/nsp16116A116AgcAgcG11AY.46.60.000072
ORF1ab/nsp16116A116AgcAgcG11AY.9.2.10.001976
ORF1ab/nsp16116A116AgcAgcT11B.1.10.000018
ORF1ab/nsp16116A116AgcAgcT11B.1.1600.000031
ORF1ab/nsp16116A116AgcAgcT11B.1.177.440.000519
ORF1ab/nsp16116A116AgcAgcG11B.1.177.520.001757
ORF1ab/nsp16116A116AgcAgcC11B.1.20.000009
ORF1ab/nsp16116A116AgcAgcT11B.1.2100.002132
ORF1ab/nsp16116A116AgcAgcT11B.1.2430.00007
ORF1ab/nsp16116A116AgcAgcG11B.1.258.70.001912
ORF1ab/nsp16116A116AgcAgcC11B.1.3670.000792
ORF1ab/nsp16116A116AgcAgcT11B.1.4270.00005
ORF1ab/nsp16116A116AgcAgcT11B.1.4290.000024
ORF1ab/nsp16116A116AgcAgcT11B.1.438.10.000107
ORF1ab/nsp16116A116AgcAgcG11B.1.5250.000113
ORF1ab/nsp16116A116AgcAgcT11B.1.930.000934
ORF1ab/nsp16116A116AgcAgcT11P.1.140.000048