CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 7

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp167P7PP6805PsynccGccT15054130580.86741120677-20679
ORF1ab/nsp167P7PP6805PsynccGccA1505419560.12993220677-20679
ORF1ab/nsp167P7PP6805PsynccGccC15054400.002657120677-20679
ORF1ab/nsp167P7SP6805SnonsynCcgTcg6316260.99207620677-20679
ORF1ab/nsp167P7SP6805SnonsynCcGTcC63130.0047543620677-20679
ORF1ab/nsp167P7SP6805SnonsynCcGTcA63110.0015847920677-20679
ORF1ab/nsp167P7SP6805SnonsynCcGTcT63110.0015847920677-20679
ORF1ab/nsp167P7delP6805deldelCCG---5555120677-20679
ORF1ab/nsp167P7LP6805LnonsyncCgcTg17140.82352920677-20679
ORF1ab/nsp167P7LP6805LnonsyncCGcTA1730.17647120677-20679
ORF1ab/nsp167P7TP6805TnonsynCcgAcg1290.7520677-20679
ORF1ab/nsp167P7TP6805TnonsynCcGAcT1230.2520677-20679
ORF1ab/nsp167P7del1P6805del1delccGcc-640.66666720677-20679
ORF1ab/nsp167P7KP6805KnonsynCCGAAA640.66666720677-20679
ORF1ab/nsp167P7KP6805KnonsynCCgAAg620.33333320677-20679
ORF1ab/nsp167P7del1P6805del1delCcg-cg610.16666720677-20679
ORF1ab/nsp167P7del1P6805del1delcCGcT-610.16666720677-20679
ORF1ab/nsp167P7QP6805QnonsyncCgcAg55120677-20679
ORF1ab/nsp167P7HP6805HnonsyncCGcAT44120677-20679
ORF1ab/nsp167P7MP6805MnonsynCCgATg33120677-20679
ORF1ab/nsp167P7AP6805AnonsynCcgGcg320.66666720677-20679
ORF1ab/nsp167P7AP6805AnonsynCcGGcC310.33333320677-20679
ORF1ab/nsp167P7del2P6805del2delCCg--g11120677-20679
ORF1ab/nsp167P7RP6805RnonsyncCGcGA11120677-20679

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp167P7PccGccT1305815054All0.002497
ORF1ab/nsp167P7PccGccA195615054All0.000374
ORF1ab/nsp167P7PccGccC4015054All0.000008
ORF1ab/nsp167P7PccGccT34993572B.1.617.20.013175
ORF1ab/nsp167P7PccGccA693572B.1.617.20.00026
ORF1ab/nsp167P7PccGccC43572B.1.617.20.000015
ORF1ab/nsp167P7PccGccA7461357AY.40.001161
ORF1ab/nsp167P7PccGccT6081357AY.40.000946
ORF1ab/nsp167P7PccGccC31357AY.40.000005
ORF1ab/nsp167P7PccGccT12811303AY.1000.058934
ORF1ab/nsp167P7PccGccC141303AY.1000.000644
ORF1ab/nsp167P7PccGccA81303AY.1000.000368
ORF1ab/nsp167P7PccGccT7931212B.1.1.70.00071
ORF1ab/nsp167P7PccGccA4141212B.1.1.70.000371
ORF1ab/nsp167P7PccGccC51212B.1.1.70.000004
ORF1ab/nsp167P7PccGccT11431161AY.430.005064
ORF1ab/nsp167P7PccGccA181161AY.430.00008
ORF1ab/nsp167P7PccGccT955955B.1.4970.300598
ORF1ab/nsp167P7PccGccT626632AY.610.065591
ORF1ab/nsp167P7PccGccA6632AY.610.000629
ORF1ab/nsp167P7SCcgTcg626631All0.00012
ORF1ab/nsp167P7SCcGTcC3631All0.000001
ORF1ab/nsp167P7SCcGTcT1631All0
ORF1ab/nsp167P7SCcGTcA1631All0
ORF1ab/nsp167P7PccGccT455512AY.1030.002825
ORF1ab/nsp167P7PccGccA56512AY.1030.000348
ORF1ab/nsp167P7PccGccC1512AY.1030.000006
ORF1ab/nsp167P7PccGccT349380B.1.6210.030893
ORF1ab/nsp167P7PccGccA31380B.1.6210.002744
ORF1ab/nsp167P7PccGccT257257AY.39.10.010181
ORF1ab/nsp167P7PccGccT213247AY.440.001296
ORF1ab/nsp167P7PccGccA34247AY.440.000207
ORF1ab/nsp167P7SCcgTcg158158B.1.1.70.000141
ORF1ab/nsp167P7PccGccT127154B.1.20.001118
ORF1ab/nsp167P7PccGccA27154B.1.20.000238
ORF1ab/nsp167P7PccGccT119152B.10.00109
ORF1ab/nsp167P7PccGccA33152B.10.000302
ORF1ab/nsp167P7PccGccT114150AY.250.000686
ORF1ab/nsp167P7PccGccA32150AY.250.000192
ORF1ab/nsp167P7PccGccC4150AY.250.000024
ORF1ab/nsp167P7PccGccT121125B.1.1770.001593
ORF1ab/nsp167P7PccGccA4125B.1.1770.000053
ORF1ab/nsp167P7PccGccT108110AY.1020.002864
ORF1ab/nsp167P7PccGccA2110AY.1020.000053
ORF1ab/nsp167P7PccGccT102105B.1.4290.0024
ORF1ab/nsp167P7PccGccA3105B.1.4290.000071
ORF1ab/nsp167P7PccGccT9595B.1.5800.386179
ORF1ab/nsp167P7PccGccT8495P.10.001323
ORF1ab/nsp167P7PccGccA1195P.10.000173
ORF1ab/nsp167P7SCcgTcg8787AY.30.000865
ORF1ab/nsp167P7PccGccT8687P.1.20.099422
ORF1ab/nsp167P7PccGccA187P.1.20.001156
ORF1ab/nsp167P7PccGccT7885AY.390.001927
ORF1ab/nsp167P7PccGccA685AY.390.000148
ORF1ab/nsp167P7PccGccC185AY.390.000025
ORF1ab/nsp167P7PccGccT5569B.1.10.000998
ORF1ab/nsp167P7PccGccA1469B.1.10.000254
ORF1ab/nsp167P7PccGccA5267B.1.1600.001622
ORF1ab/nsp167P7PccGccT1567B.1.1600.000468
ORF1ab/nsp167P7PccGccT4462AY.290.000694
ORF1ab/nsp167P7PccGccA1762AY.290.000268
ORF1ab/nsp167P7PccGccC162AY.290.000016
ORF1ab/nsp167P7PccGccT5960AY.75.10.010638
ORF1ab/nsp167P7PccGccA160AY.75.10.00018
ORF1ab/nsp167P7delCCG---5555All0.000011
ORF1ab/nsp167P7SCcgTcg5252AY.40.000081
ORF1ab/nsp167P7PccGccT4650B.1.5260.001081
ORF1ab/nsp167P7PccGccA450B.1.5260.000094
ORF1ab/nsp167P7PccGccA3048AY.4.20.000651
ORF1ab/nsp167P7PccGccT1648AY.4.20.000347
ORF1ab/nsp167P7PccGccC248AY.4.20.000043
ORF1ab/nsp167P7PccGccT4345AY.230.002999
ORF1ab/nsp167P7PccGccA245AY.230.000139
ORF1ab/nsp167P7PccGccT4242AY.1110.007692
ORF1ab/nsp167P7SCcgTcg4242B.1.10.000762
ORF1ab/nsp167P7PccGccT3839AY.460.003955
ORF1ab/nsp167P7PccGccA139AY.460.000104
ORF1ab/nsp167P7PccGccT3639B.1.3510.00107
ORF1ab/nsp167P7PccGccA339B.1.3510.000089
ORF1ab/nsp167P7PccGccT2436AY.30.000239
ORF1ab/nsp167P7PccGccA1236AY.30.000119
ORF1ab/nsp167P7PccGccT3536AY.640.020833
ORF1ab/nsp167P7PccGccA136AY.640.000595
ORF1ab/nsp167P7PccGccT3336B.1.5250.003734
ORF1ab/nsp167P7PccGccA336B.1.5250.000339
ORF1ab/nsp167P7PccGccT2635AY.1190.000918
ORF1ab/nsp167P7PccGccA935AY.1190.000318
ORF1ab/nsp167P7SCcgTcg3434B.1.5750.010316
ORF1ab/nsp167P7PccGccT3333AY.16.10.015508
ORF1ab/nsp167P7PccGccT3233AY.200.001244
ORF1ab/nsp167P7PccGccA133AY.200.000039
ORF1ab/nsp167P7PccGccT3132AY.420.001247
ORF1ab/nsp167P7PccGccA132AY.420.00004
ORF1ab/nsp167P7PccGccT3131B.1.1.280.009648
ORF1ab/nsp167P7PccGccT3031B.1.1.330.012626
ORF1ab/nsp167P7PccGccA131B.1.1.330.000421
ORF1ab/nsp167P7PccGccT3030AY.1170.002535
ORF1ab/nsp167P7PccGccT2829P.1.70.00894
ORF1ab/nsp167P7PccGccA129P.1.70.000319
ORF1ab/nsp167P7SCcgTcg2828AY.1030.000174
ORF1ab/nsp167P7PccGccA1928B.1.1.5190.000755
ORF1ab/nsp167P7PccGccT928B.1.1.5190.000357
ORF1ab/nsp167P7PccGccA2727AC.11
ORF1ab/nsp167P7PccGccT2727B.1.617.10.003482
ORF1ab/nsp167P7PccGccT2626AY.4.2.10.003874
ORF1ab/nsp167P7PccGccT2626B.1.5960.002266
ORF1ab/nsp167P7PccGccT2525AY.780.038521
ORF1ab/nsp167P7SCcgTcg2525B.1.1770.000329
ORF1ab/nsp167P7PccGccT2424AD.20.005255
ORF1ab/nsp167P7PccGccT2024AY.60.000823
ORF1ab/nsp167P7PccGccA424AY.60.000165
ORF1ab/nsp167P7PccGccA1924B0.002428
ORF1ab/nsp167P7PccGccT524B0.000639
ORF1ab/nsp167P7PccGccA2424B.1.3460.031455
ORF1ab/nsp167P7PccGccT2222B.1.360.00321
ORF1ab/nsp167P7PccGccT2222B.1.6270.044444
ORF1ab/nsp167P7PccGccT2022P.20.003733
ORF1ab/nsp167P7PccGccA222P.20.000373
ORF1ab/nsp167P7PccGccT1821AY.260.00051
ORF1ab/nsp167P7PccGccA321AY.260.000085
ORF1ab/nsp167P7PccGccT1721AY.50.000351
ORF1ab/nsp167P7PccGccA421AY.50.000083
ORF1ab/nsp167P7PccGccT2121AY.550.019266
ORF1ab/nsp167P7PccGccT2021B.1.1.2220.00408
ORF1ab/nsp167P7PccGccA121B.1.1.2220.000204
ORF1ab/nsp167P7PccGccT2020B.1.1.5240.416667
ORF1ab/nsp167P7delCCG---1919B.1.1.70.000017
ORF1ab/nsp167P7PccGccT1718AY.9.20.000624
ORF1ab/nsp167P7PccGccA118AY.9.20.000037
ORF1ab/nsp167P7PccGccT1818B.1.36.80.018
ORF1ab/nsp167P7LcCgcTg1417All0.000003
ORF1ab/nsp167P7LcCGcTA317All0.000001
ORF1ab/nsp167P7PccGccT1517AY.340.001454
ORF1ab/nsp167P7PccGccA217AY.340.000194
ORF1ab/nsp167P7PccGccT1217AY.46.60.000866
ORF1ab/nsp167P7PccGccA517AY.46.60.000361
ORF1ab/nsp167P7SCcgTcg1717B.1.5260.0004
ORF1ab/nsp167P7PccGccT1016AY.980.00079
ORF1ab/nsp167P7PccGccA616AY.980.000474
ORF1ab/nsp167P7PccGccT1616B.1.1.250.009096
ORF1ab/nsp167P7PccGccT1214AY.1180.000752
ORF1ab/nsp167P7PccGccA214AY.1180.000125
ORF1ab/nsp167P7PccGccT1414AY.190.015964
ORF1ab/nsp167P7PccGccT1414B.1.1.3170.005764
ORF1ab/nsp167P7PccGccA1114C.370.001277
ORF1ab/nsp167P7PccGccT314C.370.000348
ORF1ab/nsp167P7PccGccT1214P.1.140.000574
ORF1ab/nsp167P7PccGccA214P.1.140.000096
ORF1ab/nsp167P7PccGccT1313AY.330.000868
ORF1ab/nsp167P7PccGccT1113AY.470.000342
ORF1ab/nsp167P7PccGccA213AY.470.000062
ORF1ab/nsp167P7SCcgTcg1313B.1.177.810.002461
ORF1ab/nsp167P7TCcgAcg912All0.000002
ORF1ab/nsp167P7TCcGAcT312All0.000001
ORF1ab/nsp167P7PccGccT1012AY.130.00161
ORF1ab/nsp167P7PccGccA212AY.130.000322
ORF1ab/nsp167P7PccGccT1212AY.750.000672
ORF1ab/nsp167P7PccGccA912B.1.1.2840.000967
ORF1ab/nsp167P7PccGccT312B.1.1.2840.000322
ORF1ab/nsp167P7PccGccT1212B.1.4270.000606
ORF1ab/nsp167P7SCcgTcg1212P.1.150.002788
ORF1ab/nsp167P7PccGccT1011AY.1060.003349
ORF1ab/nsp167P7PccGccA111AY.1060.000335
ORF1ab/nsp167P7PccGccT1011AY.3.10.000853
ORF1ab/nsp167P7PccGccA111AY.3.10.000085
ORF1ab/nsp167P7SCcgTcg1111AY.4.50.001182
ORF1ab/nsp167P7PccGccT1111AY.450.001339
ORF1ab/nsp167P7PccGccT1111B.1.1.3060.004822
ORF1ab/nsp167P7PccGccA1111B.1.1.4050.916667
ORF1ab/nsp167P7PccGccT1111B.1.1.470.058824
ORF1ab/nsp167P7PccGccA811B.1.177.860.001468
ORF1ab/nsp167P7PccGccT311B.1.177.860.00055
ORF1ab/nsp167P7PccGccA1111B.1.3710.012346
ORF1ab/nsp167P7SCcgTcg1111P.10.000173
ORF1ab/nsp167P7PccGccA611Q.80.000989
ORF1ab/nsp167P7PccGccT511Q.80.000825
ORF1ab/nsp167P7PccGccT1010AY.5.30.003374
ORF1ab/nsp167P7PccGccT810AY.98.10.000387
ORF1ab/nsp167P7PccGccA210AY.98.10.000097
ORF1ab/nsp167P7SCcgTcg1010B.1.3510.000297
ORF1ab/nsp167P7PccGccT910C.36.30.005105
ORF1ab/nsp167P7PccGccA110C.36.30.000567
ORF1ab/nsp167P7SCcgTcg99AY.330.000601
ORF1ab/nsp167P7TCcgAcg89B.1.1.70.000007
ORF1ab/nsp167P7TCcGAcT19B.1.1.70.000001
ORF1ab/nsp167P7PccGccA69B.1.2340.000792
ORF1ab/nsp167P7PccGccT39B.1.2340.000396
ORF1ab/nsp167P7PccGccT99B.1.6280.003171
ORF1ab/nsp167P7SCcgTcg99P.1.160.003367
ORF1ab/nsp167P7delCCG---880.444444
ORF1ab/nsp167P7PccGccT68AY.1200.000223
ORF1ab/nsp167P7PccGccA28AY.1200.000074
ORF1ab/nsp167P7PccGccA48AY.270.000259
ORF1ab/nsp167P7PccGccT48AY.270.000259
ORF1ab/nsp167P7PccGccT78B.1.1.3050.027027
ORF1ab/nsp167P7PccGccA18B.1.1.3050.003861
ORF1ab/nsp167P7PccGccT68B.1.2580.000399
ORF1ab/nsp167P7PccGccA28B.1.2580.000133
ORF1ab/nsp167P7PccGccT88B.1.351.20.002421
ORF1ab/nsp167P7SCcgTcg88B.1.360.001167
ORF1ab/nsp167P7PccGccT88B.6.60.007111
ORF1ab/nsp167P7SCcgTcg77AY.250.000042
ORF1ab/nsp167P7SCcgTcg77AY.260.000198
ORF1ab/nsp167P7PccGccT77AY.34.10.00357
ORF1ab/nsp167P7PccGccT77AY.380.003495
ORF1ab/nsp167P7SCcgTcg77AY.440.000043
ORF1ab/nsp167P7PccGccT77AY.540.000667
ORF1ab/nsp167P7PccGccT67AY.650.003198
ORF1ab/nsp167P7PccGccA17AY.650.000533
ORF1ab/nsp167P7PccGccA77B.1.1110.008226
ORF1ab/nsp167P7PccGccT67B.1.36.170.002964
ORF1ab/nsp167P7PccGccC17B.1.36.170.000494
ORF1ab/nsp167P7PccGccT77B.1.5950.001827
ORF1ab/nsp167P7PccGccT77C.180.018135
ORF1ab/nsp167P7PccGccT66AE.80.002934
ORF1ab/nsp167P7KCCGAAA46All0.000001
ORF1ab/nsp167P7del1ccGcc-46All0.000001
ORF1ab/nsp167P7KCCgAAg26All0
ORF1ab/nsp167P7del1cCGcT-16All0
ORF1ab/nsp167P7del1Ccg-cg16All0
ORF1ab/nsp167P7PccGccT56AY.4.50.000537
ORF1ab/nsp167P7PccGccA16AY.4.50.000107
ORF1ab/nsp167P7PccGccT36AY.46.20.001906
ORF1ab/nsp167P7PccGccA36AY.46.20.001906
ORF1ab/nsp167P7PccGccT46AY.520.003257
ORF1ab/nsp167P7PccGccA26AY.520.001629
ORF1ab/nsp167P7PccGccT66AY.710.00285
ORF1ab/nsp167P7PccGccA66B.1.1.1210.014563
ORF1ab/nsp167P7PccGccT56B.1.1.2160.004452
ORF1ab/nsp167P7PccGccA16B.1.1.2160.00089
ORF1ab/nsp167P7PccGccT56B.1.2210.000355
ORF1ab/nsp167P7PccGccA16B.1.2210.000071
ORF1ab/nsp167P7PccGccT46B.1.258.170.000416
ORF1ab/nsp167P7PccGccA26B.1.258.170.000208
ORF1ab/nsp167P7PccGccT66B.1.4620.043478
ORF1ab/nsp167P7PccGccT66B.1.5170.002562
ORF1ab/nsp167P7PccGccT66D.20.00045
ORF1ab/nsp167P7PccGccA46P.1.120.001936
ORF1ab/nsp167P7PccGccT26P.1.120.000968
ORF1ab/nsp167P7QcCgcAg55All0.000001
ORF1ab/nsp167P7PccGccT45AY.1090.002959
ORF1ab/nsp167P7PccGccA15AY.1090.00074
ORF1ab/nsp167P7PccGccT55AY.1210.000677
ORF1ab/nsp167P7PccGccT55AY.160.001898
ORF1ab/nsp167P7SCcgTcg55AY.420.000201
ORF1ab/nsp167P7SCcgTcg45AY.430.000018
ORF1ab/nsp167P7SCcGTcA15AY.430.000004
ORF1ab/nsp167P7PccGccA45AY.46.40.000658
ORF1ab/nsp167P7PccGccT15AY.46.40.000165
ORF1ab/nsp167P7PccGccT45AY.670.001857
ORF1ab/nsp167P7PccGccA15AY.670.000464
ORF1ab/nsp167P7PccGccT55AY.680.001369
ORF1ab/nsp167P7PccGccT55AY.840.002187
ORF1ab/nsp167P7PccGccT55B.1.1.1890.007564
ORF1ab/nsp167P7SCcgTcg55B.1.1.2670.050505
ORF1ab/nsp167P7KCCGAAA35B.1.1.70.000003
ORF1ab/nsp167P7KCCgAAg25B.1.1.70.000002
ORF1ab/nsp167P7PccGccT55B.1.177.40.001055
ORF1ab/nsp167P7PccGccT55B.1.177.430.007386
ORF1ab/nsp167P7PccGccT55B.1.2410.004058
ORF1ab/nsp167P7PccGccT55B.1.2430.000348
ORF1ab/nsp167P7PccGccT55B.1.2650.006353
ORF1ab/nsp167P7PccGccT55B.1.36.10.005701
ORF1ab/nsp167P7PccGccT55B.1.5820.002453
ORF1ab/nsp167P7SCcgTcg55B.1.617.20.000019
ORF1ab/nsp167P7PccGccA45B.40.00883
ORF1ab/nsp167P7PccGccT15B.40.002208
ORF1ab/nsp167P7PccGccT55B.400.001821
ORF1ab/nsp167P7PccGccT55P.50.068493
ORF1ab/nsp167P7HcCGcAT44All0.000001
ORF1ab/nsp167P7SCcgTcg44AY.1060.00134
ORF1ab/nsp167P7PccGccT44AY.1160.001147
ORF1ab/nsp167P7PccGccT44AY.410.001176
ORF1ab/nsp167P7PccGccT44AY.5.40.001107
ORF1ab/nsp167P7PccGccT44AY.620.001743
ORF1ab/nsp167P7SCcgTcg44AY.80.002424
ORF1ab/nsp167P7PccGccA24AY.90.000135
ORF1ab/nsp167P7PccGccT24AY.90.000135
ORF1ab/nsp167P7PccGccT44AY.910.002922
ORF1ab/nsp167P7SCcgTcg34B.10.000027
ORF1ab/nsp167P7SCcGTcC14B.10.000009
ORF1ab/nsp167P7PccGccT44B.1.1.1700.004988
ORF1ab/nsp167P7PccGccT44B.1.1.2070.004728
ORF1ab/nsp167P7PccGccA44B.1.1.2280.012195
ORF1ab/nsp167P7PccGccT44B.1.1.2540.044944
ORF1ab/nsp167P7SCcgTcg44B.1.20.000035
ORF1ab/nsp167P7PccGccT44B.1.22.10.125
ORF1ab/nsp167P7PccGccT44B.1.351.30.003506
ORF1ab/nsp167P7PccGccT44B.1.36.290.002069
ORF1ab/nsp167P7PccGccA34B.1.3670.002377
ORF1ab/nsp167P7PccGccT14B.1.3670.000792
ORF1ab/nsp167P7PccGccT44B.1.5640.001704
ORF1ab/nsp167P7PccGccT34B.1.6090.001438
ORF1ab/nsp167P7PccGccA14B.1.6090.000479
ORF1ab/nsp167P7PccGccT44B.1.6230.002146
ORF1ab/nsp167P7PccGccA44B.230.011696
ORF1ab/nsp167P7PccGccT24Q.10.000253
ORF1ab/nsp167P7PccGccC14Q.10.000126
ORF1ab/nsp167P7PccGccA14Q.10.000126
ORF1ab/nsp167P7PccGccT44Y.10.051282
ORF1ab/nsp167P7PccGccA33A.2.50.001497
ORF1ab/nsp167P7MCCgATg33All0.000001
ORF1ab/nsp167P7ACcgGcg23All0
ORF1ab/nsp167P7ACcGGcC13All0
ORF1ab/nsp167P7SCcgTcg33AY.1200.000112
ORF1ab/nsp167P7PccGccT33AY.23.10.001252
ORF1ab/nsp167P7PccGccA23AY.360.000296
ORF1ab/nsp167P7PccGccT13AY.360.000148
ORF1ab/nsp167P7PccGccT33AY.46.30.002801
ORF1ab/nsp167P7PccGccT23AY.70.000392
ORF1ab/nsp167P7PccGccA13AY.70.000196
ORF1ab/nsp167P7PccGccT33AY.7.10.000338
ORF1ab/nsp167P7PccGccT33AY.730.001996
ORF1ab/nsp167P7PccGccT33AY.850.001282
ORF1ab/nsp167P7PccGccT33AY.870.002498
ORF1ab/nsp167P7PccGccT33AY.880.002653
ORF1ab/nsp167P7PccGccT33AY.920.000862
ORF1ab/nsp167P7PccGccT33AY.99.20.000276
ORF1ab/nsp167P7HcCGcAT33B.10.000027
ORF1ab/nsp167P7delCCG---33B.1.10.000054
ORF1ab/nsp167P7PccGccT33B.1.1.2940.003797
ORF1ab/nsp167P7PccGccT33B.1.1.370.000579
ORF1ab/nsp167P7LcCgcTg33B.1.1.70.000003
ORF1ab/nsp167P7PccGccA23B.1.1.700.000682
ORF1ab/nsp167P7PccGccT13B.1.1.700.000341
ORF1ab/nsp167P7PccGccT33B.1.160.160.002788
ORF1ab/nsp167P7PccGccA33B.1.177.810.000568
ORF1ab/nsp167P7SCcgTcg33B.1.2320.001612
ORF1ab/nsp167P7LcCGcTA33B.1.2350.007557
ORF1ab/nsp167P7PccGccT33B.1.3110.000824
ORF1ab/nsp167P7PccGccT33B.1.3960.002117
ORF1ab/nsp167P7PccGccA23B.1.438.10.000215
ORF1ab/nsp167P7PccGccT13B.1.438.10.000107
ORF1ab/nsp167P7PccGccT33B.1.6190.002613
ORF1ab/nsp167P7PccGccT23B.1.6370.000146
ORF1ab/nsp167P7PccGccA13B.1.6370.000073
ORF1ab/nsp167P7PccGccT33B.60.00273
ORF1ab/nsp167P7PccGccT33C.280.12
ORF1ab/nsp167P7PccGccC22A0.000774
ORF1ab/nsp167P7PccGccT22AE.10.022727
ORF1ab/nsp167P7PccGccT22AY.100.00106
ORF1ab/nsp167P7PccGccT22AY.1010.000981
ORF1ab/nsp167P7PccGccA12AY.120.10.000321
ORF1ab/nsp167P7PccGccT12AY.120.10.000321
ORF1ab/nsp167P7PccGccT22AY.120.20.002571
ORF1ab/nsp167P7PccGccT22AY.220.004184
ORF1ab/nsp167P7PccGccT22AY.300.000791
ORF1ab/nsp167P7PccGccA22AY.370.000632
ORF1ab/nsp167P7SCcgTcg22AY.4.20.000043
ORF1ab/nsp167P7PccGccT22AY.4.40.000818
ORF1ab/nsp167P7PccGccT22AY.480.00093
ORF1ab/nsp167P7PccGccT22AY.5.20.004926
ORF1ab/nsp167P7PccGccT22AY.600.001876
ORF1ab/nsp167P7SCcgTcg22AY.7.10.000225
ORF1ab/nsp167P7PccGccT22AY.7.20.001119
ORF1ab/nsp167P7PccGccT22AY.700.000417
ORF1ab/nsp167P7PccGccT22AY.810.003984
ORF1ab/nsp167P7PccGccT22AY.820.002714
ORF1ab/nsp167P7PccGccT22AY.99.10.003106
ORF1ab/nsp167P7PccGccT22B.1.1.1980.002937
ORF1ab/nsp167P7PccGccT22B.1.1.2200.003717
ORF1ab/nsp167P7SCcgTcg22B.1.1.2220.000408
ORF1ab/nsp167P7PccGccT22B.1.1.2310.006192
ORF1ab/nsp167P7PccGccT22B.1.1.2410.004141
ORF1ab/nsp167P7PccGccT22B.1.1.2690.002706
ORF1ab/nsp167P7SCcgTcg22B.1.1.280.000622
ORF1ab/nsp167P7PccGccT22B.1.1.3110.000716
ORF1ab/nsp167P7PccGccT22B.1.1.3510.005587
ORF1ab/nsp167P7PccGccA22B.1.1.3540.008772
ORF1ab/nsp167P7PccGccT22B.1.1.4200.002012
ORF1ab/nsp167P7PccGccT22B.1.1.500.001358
ORF1ab/nsp167P7SCcgTcg22B.1.1.5210.010695
ORF1ab/nsp167P7PccGccT22B.1.160.140.004237
ORF1ab/nsp167P7PccGccT22B.1.160.280.005848
ORF1ab/nsp167P7PccGccA22B.1.160.290.008439
ORF1ab/nsp167P7PccGccT22B.1.177.730.001133
ORF1ab/nsp167P7PccGccA22B.1.177.800.003824
ORF1ab/nsp167P7TCcgAcg12B.1.20.000009
ORF1ab/nsp167P7TCcGAcT12B.1.20.000009
ORF1ab/nsp167P7PccGccT22B.1.2100.004264
ORF1ab/nsp167P7PccGccT22B.1.258.120.015748
ORF1ab/nsp167P7SCcgTcg22B.1.258.170.000208
ORF1ab/nsp167P7PccGccT22B.1.258.30.00335
ORF1ab/nsp167P7PccGccT22B.1.36.260.005714
ORF1ab/nsp167P7PccGccT12B.1.3690.000285
ORF1ab/nsp167P7PccGccA12B.1.3690.000285
ORF1ab/nsp167P7SCcGTcT12B.1.4160.001269
ORF1ab/nsp167P7SCcgTcg12B.1.4160.001269
ORF1ab/nsp167P7PccGccT22B.1.4250.005988
ORF1ab/nsp167P7PccGccT22B.1.4280.002041
ORF1ab/nsp167P7PccGccA12B.1.5650.00081
ORF1ab/nsp167P7PccGccT12B.1.5650.00081
ORF1ab/nsp167P7PccGccA22B.1.5760.001813
ORF1ab/nsp167P7SCcGTcC22B.1.5820.000981
ORF1ab/nsp167P7del1ccGcc-12B.1.617.20.000004
ORF1ab/nsp167P7del1cCGcT-12B.1.617.20.000004
ORF1ab/nsp167P7SCcgTcg22B.1.6370.000146
ORF1ab/nsp167P7PccGccA12C.360.000911
ORF1ab/nsp167P7PccGccT12C.360.000911
ORF1ab/nsp167P7PccGccT22P.30.00319
ORF1ab/nsp167P7PccGccT110.055556
ORF1ab/nsp167P7QcCgcAg11A0.000387
ORF1ab/nsp167P7PccGccT11A.10.000282
ORF1ab/nsp167P7PccGccT11A.40.012821
ORF1ab/nsp167P7PccGccT11A.70.055556
ORF1ab/nsp167P7MCCgATg11AD.20.000219
ORF1ab/nsp167P7del2CCg--g11All0
ORF1ab/nsp167P7RcCGcGA11All0
ORF1ab/nsp167P7PccGccT11AY.10.000396
ORF1ab/nsp167P7SCcgTcg11AY.1020.000027
ORF1ab/nsp167P7LcCgcTg11AY.1030.000006
ORF1ab/nsp167P7PccGccT11AY.1050.000643
ORF1ab/nsp167P7PccGccT11AY.1100.000113
ORF1ab/nsp167P7delCCG---11AY.1130.000142
ORF1ab/nsp167P7PccGccT11AY.120.000316
ORF1ab/nsp167P7SCcgTcg11AY.120.000316
ORF1ab/nsp167P7PccGccT11AY.140.000088
ORF1ab/nsp167P7SCcgTcg11AY.160.00038
ORF1ab/nsp167P7SCcgTcg11AY.200.000039
ORF1ab/nsp167P7SCcgTcg11AY.230.00007
ORF1ab/nsp167P7delCCG---11AY.250.000006
ORF1ab/nsp167P7delCCG---11AY.260.000028
ORF1ab/nsp167P7delCCG---11AY.30.00001
ORF1ab/nsp167P7PccGccT11AY.320.000532
ORF1ab/nsp167P7PccGccT11AY.350.000233
ORF1ab/nsp167P7QcCgcAg11AY.390.000025
ORF1ab/nsp167P7PccGccT11AY.39.20.001541
ORF1ab/nsp167P7delCCG---11AY.40.000002
ORF1ab/nsp167P7LcCgcTg11AY.40.000002
ORF1ab/nsp167P7HcCGcAT11AY.40.000002
ORF1ab/nsp167P7del1ccGcc-11AY.40.000002
ORF1ab/nsp167P7delCCG---11AY.4.50.000107
ORF1ab/nsp167P7TCcGAcT11AY.440.000006
ORF1ab/nsp167P7LcCgcTg11AY.440.000006
ORF1ab/nsp167P7LcCgcTg11AY.450.000122
ORF1ab/nsp167P7SCcgTcg11AY.50.000021
ORF1ab/nsp167P7PccGccT11AY.530.000288
ORF1ab/nsp167P7PccGccT11AY.560.001605
ORF1ab/nsp167P7PccGccA11AY.580.000907
ORF1ab/nsp167P7PccGccA11AY.590.00053
ORF1ab/nsp167P7SCcgTcg11AY.620.000436
ORF1ab/nsp167P7delCCG---11AY.670.000464
ORF1ab/nsp167P7LcCgcTg11AY.700.000209
ORF1ab/nsp167P7SCcgTcg11AY.710.000475
ORF1ab/nsp167P7PccGccT11AY.740.000116
ORF1ab/nsp167P7PccGccT11AY.770.001127
ORF1ab/nsp167P7LcCgcTg11AY.790.001211
ORF1ab/nsp167P7RcCGcGA11AY.840.000437
ORF1ab/nsp167P7PccGccT11AY.860.00083
ORF1ab/nsp167P7PccGccT11AY.890.004902
ORF1ab/nsp167P7PccGccT11AY.9.10.000084
ORF1ab/nsp167P7ACcGGcC11AY.9.20.000037
ORF1ab/nsp167P7PccGccT11AY.930.000273
ORF1ab/nsp167P7SCcgTcg11AY.940.000443
ORF1ab/nsp167P7PccGccT11AY.950.000761
ORF1ab/nsp167P7PccGccT11AY.970.001701
ORF1ab/nsp167P7SCcgTcg11AY.980.000079
ORF1ab/nsp167P7PccGccT11AY.990.001049
ORF1ab/nsp167P7delCCG---11AY.990.001049
ORF1ab/nsp167P7QcCgcAg11B.10.000009
ORF1ab/nsp167P7LcCgcTg11B.10.000009
ORF1ab/nsp167P7delCCG---11B.10.000009
ORF1ab/nsp167P7del1ccGcc-11B.1.10.000018
ORF1ab/nsp167P7PccGccT11B.1.1.10.000327
ORF1ab/nsp167P7PccGccT11B.1.1.100.001115
ORF1ab/nsp167P7PccGccT11B.1.1.1000.04
ORF1ab/nsp167P7SCcgTcg11B.1.1.1180.010204
ORF1ab/nsp167P7SCcgTcg11B.1.1.1590.004673
ORF1ab/nsp167P7PccGccA11B.1.1.1760.000439
ORF1ab/nsp167P7PccGccT11B.1.1.2140.000055
ORF1ab/nsp167P7MCCgATg11B.1.1.2160.00089
ORF1ab/nsp167P7PccGccT11B.1.1.2180.007692
ORF1ab/nsp167P7SCcgTcg11B.1.1.2200.001859
ORF1ab/nsp167P7PccGccT11B.1.1.2730.006757
ORF1ab/nsp167P7PccGccA11B.1.1.3010.001179
ORF1ab/nsp167P7PccGccA11B.1.1.3120.001912
ORF1ab/nsp167P7PccGccT11B.1.1.3690.000446
ORF1ab/nsp167P7PccGccT11B.1.1.3720.000689
ORF1ab/nsp167P7PccGccA11B.1.1.390.00051
ORF1ab/nsp167P7PccGccA11B.1.1.4290.004608
ORF1ab/nsp167P7PccGccT11B.1.1.510.001718
ORF1ab/nsp167P7PccGccA11B.1.1.630.000386
ORF1ab/nsp167P7QcCgcAg11B.1.1.70.000001
ORF1ab/nsp167P7ACcgGcg11B.1.1.70.000001
ORF1ab/nsp167P7delCCG---11B.1.1.700.000341
ORF1ab/nsp167P7PccGccA11B.1.110.30.000718
ORF1ab/nsp167P7PccGccA11B.1.1310.008772
ORF1ab/nsp167P7PccGccA11B.1.1530.018868
ORF1ab/nsp167P7delCCG---11B.1.160.230.004831
ORF1ab/nsp167P7PccGccT11B.1.177.150.000631
ORF1ab/nsp167P7delCCG---11B.1.177.170.000821
ORF1ab/nsp167P7PccGccT11B.1.177.210.000076
ORF1ab/nsp167P7PccGccT11B.1.177.230.003236
ORF1ab/nsp167P7PccGccT11B.1.177.330.001645
ORF1ab/nsp167P7LcCgcTg11B.1.177.430.001477
ORF1ab/nsp167P7PccGccA11B.1.177.450.000381
ORF1ab/nsp167P7SCcgTcg11B.1.177.570.000281
ORF1ab/nsp167P7PccGccT11B.1.177.620.001192
ORF1ab/nsp167P7KCCGAAA11B.1.177.650.000665
ORF1ab/nsp167P7delCCG---11B.1.177.730.000566
ORF1ab/nsp167P7PccGccA11B.1.177.770.000726
ORF1ab/nsp167P7SCcgTcg11B.1.177.770.000726
ORF1ab/nsp167P7PccGccA11B.1.177.820.000477
ORF1ab/nsp167P7delCCG---11B.1.177.830.001481
ORF1ab/nsp167P7del2CCg--g11B.1.177.870.000728
ORF1ab/nsp167P7PccGccT11B.1.177.870.000728
ORF1ab/nsp167P7PccGccT11B.1.1790.003759
ORF1ab/nsp167P7PccGccT11B.1.1890.004292
ORF1ab/nsp167P7QcCgcAg11B.1.20.000009
ORF1ab/nsp167P7delCCG---11B.1.20.000009
ORF1ab/nsp167P7PccGccT11B.1.2140.003663
ORF1ab/nsp167P7PccGccT11B.1.2180.005155
ORF1ab/nsp167P7PccGccT11B.1.221.40.004167
ORF1ab/nsp167P7SCcgTcg11B.1.2340.000132
ORF1ab/nsp167P7SCcgTcg11B.1.2360.002053
ORF1ab/nsp167P7PccGccT11B.1.2400.000216
ORF1ab/nsp167P7SCcgTcg11B.1.2410.000812
ORF1ab/nsp167P7delCCG---11B.1.2580.000067
ORF1ab/nsp167P7PccGccT11B.1.258.110.000396
ORF1ab/nsp167P7PccGccA11B.1.2600.003344
ORF1ab/nsp167P7PccGccT11B.1.3200.001245
ORF1ab/nsp167P7PccGccC11B.1.3320.003497
ORF1ab/nsp167P7LcCgcTg11B.1.3510.00003
ORF1ab/nsp167P7SCcgTcg11B.1.351.20.000303
ORF1ab/nsp167P7del1ccGcc-11B.1.3560.001727
ORF1ab/nsp167P7PccGccA11B.1.36.180.00042
ORF1ab/nsp167P7PccGccT11B.1.36.220.001208
ORF1ab/nsp167P7PccGccT11B.1.36.330.007576
ORF1ab/nsp167P7PccGccT11B.1.36.360.000602
ORF1ab/nsp167P7del1Ccg-cg11B.1.3610.001289
ORF1ab/nsp167P7PccGccT11B.1.3620.001541
ORF1ab/nsp167P7PccGccT11B.1.3830.009009
ORF1ab/nsp167P7PccGccT11B.1.4000.000429
ORF1ab/nsp167P7PccGccT11B.1.4050.012346
ORF1ab/nsp167P7PccGccT11B.1.4130.004255
ORF1ab/nsp167P7SCcgTcg11B.1.4290.000024
ORF1ab/nsp167P7PccGccT11B.1.4410.009615
ORF1ab/nsp167P7PccGccT11B.1.4430.004673
ORF1ab/nsp167P7PccGccT11B.1.4530.003236
ORF1ab/nsp167P7SCcgTcg11B.1.4560.003268
ORF1ab/nsp167P7PccGccT11B.1.4560.003268
ORF1ab/nsp167P7PccGccT11B.1.466.20.000391
ORF1ab/nsp167P7PccGccT11B.1.4690.00361
ORF1ab/nsp167P7PccGccT11B.1.4800.002488
ORF1ab/nsp167P7ACcgGcg11B.1.4970.000315
ORF1ab/nsp167P7PccGccT11B.1.5150.014493
ORF1ab/nsp167P7delCCG---11B.1.5250.000113
ORF1ab/nsp167P7delCCG---11B.1.5260.000024
ORF1ab/nsp167P7delCCG---11B.1.5610.000397
ORF1ab/nsp167P7LcCgcTg11B.1.5770.000687
ORF1ab/nsp167P7PccGccT11B.1.5810.009434
ORF1ab/nsp167P7PccGccT11B.1.5880.00091
ORF1ab/nsp167P7LcCgcTg11B.1.5960.000087
ORF1ab/nsp167P7delCCG---11B.1.5960.000087
ORF1ab/nsp167P7PccGccA11B.1.6040.017241
ORF1ab/nsp167P7delCCG---11B.1.617.20.000004
ORF1ab/nsp167P7MCCgATg11B.1.617.20.000004
ORF1ab/nsp167P7delCCG---11B.1.617.30.002985
ORF1ab/nsp167P7delCCG---11B.1.6200.000946
ORF1ab/nsp167P7SCcgTcg11B.1.6210.000089
ORF1ab/nsp167P7PccGccT11B.1.6250.002353
ORF1ab/nsp167P7PccGccA11B.1.9.40.006135
ORF1ab/nsp167P7PccGccA11B.1.930.000934
ORF1ab/nsp167P7PccGccT11B.1.940.027027
ORF1ab/nsp167P7PccGccT11B.110.005128
ORF1ab/nsp167P7PccGccT11B.4.10.018868
ORF1ab/nsp167P7SCcgTcg11B.60.00091
ORF1ab/nsp167P7PccGccT11B.610.005747
ORF1ab/nsp167P7PccGccT11C.260.007353
ORF1ab/nsp167P7PccGccT11N.10.016949
ORF1ab/nsp167P7SCcgTcg11P.1.130.000898
ORF1ab/nsp167P7delCCG---11P.1.150.000232
ORF1ab/nsp167P7PccGccT11P.1.150.000232
ORF1ab/nsp167P7delCCG---11P.1.70.000319
ORF1ab/nsp167P7PccGccA11Q.40.000455
ORF1ab/nsp167P7PccGccT11R.10.00009
ORF1ab/nsp167P7PccGccT11Z.10.00289