CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 47 & Codon = taC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1647Y47YY6845YsyntaTtaC21902190120797-20799

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1647Y47YtaTtaC21902190All0.000419
ORF1ab/nsp1647Y47YtaTtaC573573B.1.258.30.959799
ORF1ab/nsp1647Y47YtaTtaC518518B.1.2580.034471
ORF1ab/nsp1647Y47YtaTtaC222222B.1.258.21
ORF1ab/nsp1647Y47YtaTtaC110110B.1.20.000969
ORF1ab/nsp1647Y47YtaTtaC9494B.1.617.20.000354
ORF1ab/nsp1647Y47YtaTtaC7373AY.980.005767
ORF1ab/nsp1647Y47YtaTtaC6060B.1.1.70.000054
ORF1ab/nsp1647Y47YtaTtaC3737B.1.258.240.397849
ORF1ab/nsp1647Y47YtaTtaC3535AY.40.000054
ORF1ab/nsp1647Y47YtaTtaC3333AY.440.000201
ORF1ab/nsp1647Y47YtaTtaC2929B.1.1.3840.690476
ORF1ab/nsp1647Y47YtaTtaC2424AY.46.60.001733
ORF1ab/nsp1647Y47YtaTtaC2424G.11
ORF1ab/nsp1647Y47YtaTtaC2323AY.360.003409
ORF1ab/nsp1647Y47YtaTtaC2020B.10.000183
ORF1ab/nsp1647Y47YtaTtaC1919AY.1030.000118
ORF1ab/nsp1647Y47YtaTtaC1515B.1.1770.000198
ORF1ab/nsp1647Y47YtaTtaC1414AY.30.000139
ORF1ab/nsp1647Y47YtaTtaC1414B.1.10.000254
ORF1ab/nsp1647Y47YtaTtaC1313P.1.140.000621
ORF1ab/nsp1647Y47YtaTtaC1212AY.430.000053
ORF1ab/nsp1647Y47YtaTtaC1212B.1.177.210.000918
ORF1ab/nsp1647Y47YtaTtaC99AY.250.000054
ORF1ab/nsp1647Y47YtaTtaC99B.1.4290.000212
ORF1ab/nsp1647Y47YtaTtaC88B.1.3690.002282
ORF1ab/nsp1647Y47YtaTtaC77AY.1080.007718
ORF1ab/nsp1647Y47YtaTtaC77AY.290.00011
ORF1ab/nsp1647Y47YtaTtaC77AY.99.20.000645
ORF1ab/nsp1647Y47YtaTtaC77B.1.617.10.000903
ORF1ab/nsp1647Y47YtaTtaC66AY.1200.000223
ORF1ab/nsp1647Y47YtaTtaC66AY.230.000418
ORF1ab/nsp1647Y47YtaTtaC66AY.260.00017
ORF1ab/nsp1647Y47YtaTtaC66B.1.1.4200.006036
ORF1ab/nsp1647Y47YtaTtaC55AY.200.000194
ORF1ab/nsp1647Y47YtaTtaC55AY.750.00028
ORF1ab/nsp1647Y47YtaTtaC55B.1.1600.000156
ORF1ab/nsp1647Y47YtaTtaC55B.1.3510.000149
ORF1ab/nsp1647Y47YtaTtaC55B.1.5260.000118
ORF1ab/nsp1647Y47YtaTtaC44AY.4.20.000087
ORF1ab/nsp1647Y47YtaTtaC44B.1.1.1740.013514
ORF1ab/nsp1647Y47YtaTtaC44B.1.1.3480.003185
ORF1ab/nsp1647Y47YtaTtaC33AY.1020.00008
ORF1ab/nsp1647Y47YtaTtaC33AY.1190.000106
ORF1ab/nsp1647Y47YtaTtaC33AY.330.0002
ORF1ab/nsp1647Y47YtaTtaC33AY.450.000365
ORF1ab/nsp1647Y47YtaTtaC33AY.570.001969
ORF1ab/nsp1647Y47YtaTtaC33AY.9.20.00011
ORF1ab/nsp1647Y47YtaTtaC33B.1.1.830.00813
ORF1ab/nsp1647Y47YtaTtaC33B.1.4700.004213
ORF1ab/nsp1647Y47YtaTtaC33B.1.5680.003333
ORF1ab/nsp1647Y47YtaTtaC33B.1.6370.000219
ORF1ab/nsp1647Y47YtaTtaC22AY.390.000049
ORF1ab/nsp1647Y47YtaTtaC22AY.4.2.10.000298
ORF1ab/nsp1647Y47YtaTtaC22AY.850.000854
ORF1ab/nsp1647Y47YtaTtaC22AY.930.000546
ORF1ab/nsp1647Y47YtaTtaC22AY.98.10.000097
ORF1ab/nsp1647Y47YtaTtaC22B.1.1.3170.000823
ORF1ab/nsp1647Y47YtaTtaC22B.1.1.3540.008772
ORF1ab/nsp1647Y47YtaTtaC22B.1.177.830.002963
ORF1ab/nsp1647Y47YtaTtaC22B.1.2210.000142
ORF1ab/nsp1647Y47YtaTtaC22B.1.4000.000858
ORF1ab/nsp1647Y47YtaTtaC22B.1.4780.023529
ORF1ab/nsp1647Y47YtaTtaC22B.1.6290.026667
ORF1ab/nsp1647Y47YtaTtaC22D.20.00015
ORF1ab/nsp1647Y47YtaTtaC110.055556
ORF1ab/nsp1647Y47YtaTtaC11A0.000387
ORF1ab/nsp1647Y47YtaTtaC11A.2.50.000499
ORF1ab/nsp1647Y47YtaTtaC11AA.20.007692
ORF1ab/nsp1647Y47YtaTtaC11AU.30.00211
ORF1ab/nsp1647Y47YtaTtaC11AY.1180.000063
ORF1ab/nsp1647Y47YtaTtaC11AY.3.10.000085
ORF1ab/nsp1647Y47YtaTtaC11AY.380.000499
ORF1ab/nsp1647Y47YtaTtaC11AY.420.00004
ORF1ab/nsp1647Y47YtaTtaC11AY.460.000104
ORF1ab/nsp1647Y47YtaTtaC11AY.470.000031
ORF1ab/nsp1647Y47YtaTtaC11AY.60.000041
ORF1ab/nsp1647Y47YtaTtaC11AY.680.000274
ORF1ab/nsp1647Y47YtaTtaC11AY.780.001541
ORF1ab/nsp1647Y47YtaTtaC11AY.880.000884
ORF1ab/nsp1647Y47YtaTtaC11AY.9.10.000084
ORF1ab/nsp1647Y47YtaTtaC11AY.960.002075
ORF1ab/nsp1647Y47YtaTtaC11B.1.1.2430.004082
ORF1ab/nsp1647Y47YtaTtaC11B.1.1.3120.001912
ORF1ab/nsp1647Y47YtaTtaC11B.1.1.4340.000349
ORF1ab/nsp1647Y47YtaTtaC11B.1.177.570.000281
ORF1ab/nsp1647Y47YtaTtaC11B.1.177.60.000977
ORF1ab/nsp1647Y47YtaTtaC11B.1.177.730.000566
ORF1ab/nsp1647Y47YtaTtaC11B.1.214.20.0006
ORF1ab/nsp1647Y47YtaTtaC11B.1.2230.002778
ORF1ab/nsp1647Y47YtaTtaC11B.1.2340.000132
ORF1ab/nsp1647Y47YtaTtaC11B.1.2430.00007
ORF1ab/nsp1647Y47YtaTtaC11B.1.258.170.000104
ORF1ab/nsp1647Y47YtaTtaC11B.1.36.80.001
ORF1ab/nsp1647Y47YtaTtaC11B.1.390.003906
ORF1ab/nsp1647Y47YtaTtaC11B.1.3990.001934
ORF1ab/nsp1647Y47YtaTtaC11B.1.5090.000866
ORF1ab/nsp1647Y47YtaTtaC11B.1.5950.000261
ORF1ab/nsp1647Y47YtaTtaC11B.1.5960.000087
ORF1ab/nsp1647Y47YtaTtaC11B.1.5990.00365
ORF1ab/nsp1647Y47YtaTtaC11B.1.6190.000871
ORF1ab/nsp1647Y47YtaTtaC11B.1.6200.000946
ORF1ab/nsp1647Y47YtaTtaC11B.1.6210.000089
ORF1ab/nsp1647Y47YtaTtaC11B.1.6280.000352
ORF1ab/nsp1647Y47YtaTtaC11B.40.002208
ORF1ab/nsp1647Y47YtaTtaC11B.550.00295
ORF1ab/nsp1647Y47YtaTtaC11B.60.00091
ORF1ab/nsp1647Y47YtaTtaC11C.160.00106
ORF1ab/nsp1647Y47YtaTtaC11P.1.170.000162
ORF1ab/nsp1647Y47YtaTtaC11Q.20.000613