CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 35 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1635T35PT6833PnonsynAcaCca1141130.99122820761-20763

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1635T35PAcaCca113114All0.000022
ORF1ab/nsp1635T35PAcaCca9393AY.750.00521
ORF1ab/nsp1635T35PAcaCca66B.1.1.70.000005
ORF1ab/nsp1635T35PAcaCca23AY.430.000009
ORF1ab/nsp1635T35PAcaCca220.111111
ORF1ab/nsp1635T35PAcaCca22B.1.10.000036
ORF1ab/nsp1635T35PAcaCca11AY.4.20.000022
ORF1ab/nsp1635T35PAcaCca11AY.650.000533
ORF1ab/nsp1635T35PAcaCca11AY.75.10.00018
ORF1ab/nsp1635T35PAcaCca11AY.850.000427
ORF1ab/nsp1635T35PAcaCca11B.10.000009
ORF1ab/nsp1635T35PAcaCca11B.1.1890.004292
ORF1ab/nsp1635T35PAcaCca11B.1.617.20.000004
ORF1ab/nsp1635T35PAcaCca11D.20.000075