CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 34

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1634A34VA6832VnonsyngCagTa953095280.9997920758-20760
ORF1ab/nsp1634A34VA6832VnonsyngCAgTC953010.00010493220758-20760
ORF1ab/nsp1634A34VA6832VnonsyngCAgTT953010.00010493220758-20760
ORF1ab/nsp1634A34SA6832SnonsynGcaTca4064040.99507420758-20760
ORF1ab/nsp1634A34SA6832SnonsynGcATcT40610.0024630520758-20760
ORF1ab/nsp1634A34SA6832SnonsynGcATcG40610.0024630520758-20760
ORF1ab/nsp1634A34AA6832AsyngcAgcG2001380.6920758-20760
ORF1ab/nsp1634A34AA6832AsyngcAgcT200530.26520758-20760
ORF1ab/nsp1634A34AA6832AsyngcAgcC20090.04520758-20760
ORF1ab/nsp1634A34EA6832EnonsyngCagAa86850.98837220758-20760
ORF1ab/nsp1634A34EA6832EnonsyngCAgAG8610.011627920758-20760
ORF1ab/nsp1634A34TA6832TnonsynGcaAca58570.98275920758-20760
ORF1ab/nsp1634A34TA6832TnonsynGcAAcT5810.017241420758-20760
ORF1ab/nsp1634A34delA6832deldelGCA---3636120758-20760
ORF1ab/nsp1634A34PA6832PnonsynGcaCca55120758-20760
ORF1ab/nsp1634A34GA6832GnonsyngCagGa44120758-20760
ORF1ab/nsp1634A34XA6832XnonsynGCaTGa22120758-20760
ORF1ab/nsp1634A34del2A6832del2delGCa--a22120758-20760
ORF1ab/nsp1634A34KA6832KnonsynGCaAAa11120758-20760
ORF1ab/nsp1634A34NA6832NnonsynGCAAAT11120758-20760
ORF1ab/nsp1634A34IA6832InonsynGCaATa11120758-20760
ORF1ab/nsp1634A34del1A6832del1delgcAgc-11120758-20760
ORF1ab/nsp1634A34DA6832DnonsyngCAgAT11120758-20760

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1634A34VgCagTa95289530All0.001822
ORF1ab/nsp1634A34VgCAgTC19530All0
ORF1ab/nsp1634A34VgCAgTT19530All0
ORF1ab/nsp1634A34VgCagTa17841784B.1.2430.124139
ORF1ab/nsp1634A34VgCagTa10061006AY.920.288997
ORF1ab/nsp1634A34VgCagTa928928B.1.1.70.000831
ORF1ab/nsp1634A34VgCagTa747747AY.40.001163
ORF1ab/nsp1634A34VgCagTa417417B.1.20.003672
ORF1ab/nsp1634A34VgCagTa411411B.1.10.007456
ORF1ab/nsp1634A34SGcaTca404406All0.000077
ORF1ab/nsp1634A34SGcATcT1406All0
ORF1ab/nsp1634A34SGcATcG1406All0
ORF1ab/nsp1634A34VgCagTa329329B.10.003013
ORF1ab/nsp1634A34VgCagTa280280B.1.617.20.001054
ORF1ab/nsp1634A34VgCagTa224224AY.250.001347
ORF1ab/nsp1634A34VgCagTa203203B.1.1.5190.008061
ORF1ab/nsp1634A34AgcAgcG138200All0.000026
ORF1ab/nsp1634A34AgcAgcT53200All0.00001
ORF1ab/nsp1634A34AgcAgcC9200All0.000002
ORF1ab/nsp1634A34VgCagTa173174AY.9.20.006354
ORF1ab/nsp1634A34VgCAgTT1174AY.9.20.000037
ORF1ab/nsp1634A34VgCagTa170170AT.10.871795
ORF1ab/nsp1634A34VgCagTa159159AY.440.000968
ORF1ab/nsp1634A34VgCagTa134134AY.30.001333
ORF1ab/nsp1634A34VgCagTa126126B.1.360.018383
ORF1ab/nsp1634A34VgCagTa112112P.10.001764
ORF1ab/nsp1634A34VgCagTa106106B.1.438.10.01137
ORF1ab/nsp1634A34VgCagTa9898AY.450.011925
ORF1ab/nsp1634A34VgCagTa9191AY.1190.003213
ORF1ab/nsp1634A34SGcaTca8787B.1.1.5180.550633
ORF1ab/nsp1634A34EgCagAa8586All0.000016
ORF1ab/nsp1634A34EgCAgAG186All0
ORF1ab/nsp1634A34VgCagTa8383B.1.1770.001093
ORF1ab/nsp1634A34VgCagTa7979AY.1030.000491
ORF1ab/nsp1634A34SGcaTca7272AY.40.000112
ORF1ab/nsp1634A34AgcAgcG7171AY.39.10.002813
ORF1ab/nsp1634A34VgCagTa6767AY.430.000297
ORF1ab/nsp1634A34VgCagTa6565B.1.2930.8125
ORF1ab/nsp1634A34TGcaAca5758All0.000011
ORF1ab/nsp1634A34TGcAAcT158All0
ORF1ab/nsp1634A34VgCagTa5858AY.290.000915
ORF1ab/nsp1634A34VgCagTa4949B.1.2340.006465
ORF1ab/nsp1634A34SGcaTca4141B.1.1.3180.012372
ORF1ab/nsp1634A34VgCagTa4040AY.70.00784
ORF1ab/nsp1634A34VgCagTa4040B.1.3510.001189
ORF1ab/nsp1634A34VgCagTa3838AY.1200.001413
ORF1ab/nsp1634A34VgCagTa3838P.1.120.018393
ORF1ab/nsp1634A34delGCA---3636All0.000007
ORF1ab/nsp1634A34SGcaTca3535B.10.000321
ORF1ab/nsp1634A34SGcaTca3434B.1.1770.000448
ORF1ab/nsp1634A34VgCagTa3131B.1.5170.013237
ORF1ab/nsp1634A34VgCagTa3030AY.1020.000795
ORF1ab/nsp1634A34VgCagTa2929B.1.2580.00193
ORF1ab/nsp1634A34VgCagTa2929B.1.5960.002527
ORF1ab/nsp1634A34VgCagTa2828AY.46.10.028747
ORF1ab/nsp1634A34VgCagTa2828B.1.4270.001414
ORF1ab/nsp1634A34VgCagTa2828B.1.5750.008495
ORF1ab/nsp1634A34VgCagTa2727B.1.4970.008499
ORF1ab/nsp1634A34VgCagTa2626AY.270.001683
ORF1ab/nsp1634A34VgCagTa2626AY.390.000642
ORF1ab/nsp1634A34VgCagTa2626B.1.1.890.157576
ORF1ab/nsp1634A34VgCagTa2626B.1.5650.02107
ORF1ab/nsp1634A34VgCagTa2323AY.260.000651
ORF1ab/nsp1634A34VgCagTa2323B.1.5970.106481
ORF1ab/nsp1634A34AgcAgcG1022B.1.1.70.000009
ORF1ab/nsp1634A34AgcAgcT922B.1.1.70.000008
ORF1ab/nsp1634A34AgcAgcC322B.1.1.70.000003
ORF1ab/nsp1634A34VgCagTa2222B.1.6210.001947
ORF1ab/nsp1634A34VgCagTa2121AY.330.001402
ORF1ab/nsp1634A34VgCagTa2121B.1.4290.000494
ORF1ab/nsp1634A34VgCagTa2121B.1.5260.000494
ORF1ab/nsp1634A34EgCagAa2121B.1.617.20.000079
ORF1ab/nsp1634A34VgCagTa2020B.1.1.2220.00408
ORF1ab/nsp1634A34TGcaAca2020B.1.4290.000471
ORF1ab/nsp1634A34VgCagTa1919B.1.1.4860.029968
ORF1ab/nsp1634A34VgCagTa1919B.1.2400.004096
ORF1ab/nsp1634A34SGcaTca1818AY.430.00008
ORF1ab/nsp1634A34VgCagTa1818AY.590.009534
ORF1ab/nsp1634A34VgCagTa1818AY.98.10.000872
ORF1ab/nsp1634A34VgCagTa1818B.1.2210.001279
ORF1ab/nsp1634A34VgCagTa1616AY.4.20.000347
ORF1ab/nsp1634A34VgCagTa1515B.1.1.4320.018987
ORF1ab/nsp1634A34VgCagTa1515B.1.1600.000468
ORF1ab/nsp1634A34EgCagAa1515B.1.438.10.001609
ORF1ab/nsp1634A34VgCagTa1414AY.3.10.001194
ORF1ab/nsp1634A34VgCagTa1414AY.46.60.001011
ORF1ab/nsp1634A34VgCagTa1414AY.610.001467
ORF1ab/nsp1634A34VgCagTa1414AY.750.000784
ORF1ab/nsp1634A34VgCagTa1414B.1.617.10.001806
ORF1ab/nsp1634A34VgCagTa1414B.1.6200.013245
ORF1ab/nsp1634A34AgcAgcG913AY.40.000014
ORF1ab/nsp1634A34AgcAgcT413AY.40.000006
ORF1ab/nsp1634A34VgCagTa1313AY.470.000404
ORF1ab/nsp1634A34VgCagTa1212AY.50.000248
ORF1ab/nsp1634A34VgCagTa1212B.1.1.670.054795
ORF1ab/nsp1634A34VgCagTa1212B.1.4000.005148
ORF1ab/nsp1634A34VgCagTa1212B.1.5950.003132
ORF1ab/nsp1634A34SGcaTca1111AY.1170.00093
ORF1ab/nsp1634A34VgCagTa1111AY.1180.000689
ORF1ab/nsp1634A34VgCagTa1111AY.130.001771
ORF1ab/nsp1634A34EgCagAa1011AY.430.000044
ORF1ab/nsp1634A34EgCAgAG111AY.430.000004
ORF1ab/nsp1634A34SGcaTca1111AY.440.000067
ORF1ab/nsp1634A34VgCagTa1111B.400.004007
ORF1ab/nsp1634A34SGcaTca1010AY.1030.000062
ORF1ab/nsp1634A34AgcAgcG1010AY.1030.000062
ORF1ab/nsp1634A34VgCagTa1010AY.140.00088
ORF1ab/nsp1634A34EgCagAa1010AY.40.000016
ORF1ab/nsp1634A34VgCagTa1010B.1.1690.149254
ORF1ab/nsp1634A34VgCagTa1010B.1.177.820.004773
ORF1ab/nsp1634A34VgCagTa99AY.1090.006657
ORF1ab/nsp1634A34VgCagTa99AY.200.00035
ORF1ab/nsp1634A34VgCagTa99AY.620.003922
ORF1ab/nsp1634A34VgCagTa99B.1.1.280.002801
ORF1ab/nsp1634A34SGcaTca99B.1.1.5190.000357
ORF1ab/nsp1634A34SGcaTca99B.1.1.70.000008
ORF1ab/nsp1634A34VgCagTa99B.1.177.860.001651
ORF1ab/nsp1634A34VgCagTa99P.1.140.00043
ORF1ab/nsp1634A34VgCagTa99Q.40.004093
ORF1ab/nsp1634A34VgCagTa88AY.1170.000676
ORF1ab/nsp1634A34VgCagTa88AY.230.000558
ORF1ab/nsp1634A34VgCagTa88AY.340.000776
ORF1ab/nsp1634A34VgCagTa88AY.420.000322
ORF1ab/nsp1634A34VgCagTa88AY.60.000329
ORF1ab/nsp1634A34VgCagTa88B.1.1.250.004548
ORF1ab/nsp1634A34VgCagTa88B.1.1.330.003367
ORF1ab/nsp1634A34VgCagTa88B.1.1.3710.083333
ORF1ab/nsp1634A34delGCA---88B.1.1.70.000007
ORF1ab/nsp1634A34VgCagTa88B.1.177.40.001688
ORF1ab/nsp1634A34VgCagTa88B.1.3110.002197
ORF1ab/nsp1634A34VgCagTa88B.1.466.20.00313
ORF1ab/nsp1634A34AgcAgcG48B.1.617.20.000015
ORF1ab/nsp1634A34AgcAgcT48B.1.617.20.000015
ORF1ab/nsp1634A34SGcaTca77AY.39.10.000277
ORF1ab/nsp1634A34VgCagTa77B.1.1.2240.1
ORF1ab/nsp1634A34VgCagTa77B.1.1.570.08046
ORF1ab/nsp1634A34VgCagTa77B.1.4280.007143
ORF1ab/nsp1634A34VgCagTa77B.1.6370.000512
ORF1ab/nsp1634A34VgCagTa77N.20.269231
ORF1ab/nsp1634A34VgCagTa77P.1.70.002235
ORF1ab/nsp1634A34VgCagTa66A0.002322
ORF1ab/nsp1634A34VgCagTa66AY.1000.000276
ORF1ab/nsp1634A34VgCagTa66AY.460.000624
ORF1ab/nsp1634A34VgCagTa66AY.870.004996
ORF1ab/nsp1634A34VgCagTa66AY.980.000474
ORF1ab/nsp1634A34VgCagTa66AY.99.20.000553
ORF1ab/nsp1634A34TGcaAca66B.1.1.70.000005
ORF1ab/nsp1634A34VgCagTa66B.1.1490.020548
ORF1ab/nsp1634A34VgCagTa66B.1.2700.033708
ORF1ab/nsp1634A34VgCagTa66B.1.36.180.002521
ORF1ab/nsp1634A34VgCagTa66B.1.3980.017857
ORF1ab/nsp1634A34AgcAgcT66B.1.6200.005676
ORF1ab/nsp1634A34SGcaTca66N.20.230769
ORF1ab/nsp1634A34VgCagTa66P.20.00112
ORF1ab/nsp1634A34VgCagTa66Q.80.000989
ORF1ab/nsp1634A34PGcaCca55All0.000001
ORF1ab/nsp1634A34VgCagTa45AY.1130.00057
ORF1ab/nsp1634A34VgCAgTC15AY.1130.000142
ORF1ab/nsp1634A34VgCagTa55AY.410.00147
ORF1ab/nsp1634A34VgCagTa55AY.46.40.000823
ORF1ab/nsp1634A34VgCagTa55B.1.1.630.001929
ORF1ab/nsp1634A34VgCagTa55B.1.177.100.00439
ORF1ab/nsp1634A34VgCagTa55B.1.258.170.00052
ORF1ab/nsp1634A34VgCagTa55B.1.4590.020408
ORF1ab/nsp1634A34VgCagTa55C.370.00058
ORF1ab/nsp1634A34delGCA---440.222222
ORF1ab/nsp1634A34VgCagTa44A.2.50.001996
ORF1ab/nsp1634A34GgCagGa44All0.000001
ORF1ab/nsp1634A34VgCagTa44AY.1010.001962
ORF1ab/nsp1634A34VgCagTa44AY.1050.002572
ORF1ab/nsp1634A34VgCagTa44AY.1060.00134
ORF1ab/nsp1634A34VgCagTa44AY.1210.000541
ORF1ab/nsp1634A34VgCagTa44AY.160.001519
ORF1ab/nsp1634A34SGcaTca44AY.230.000279
ORF1ab/nsp1634A34SGcaTca44AY.250.000024
ORF1ab/nsp1634A34AgcAgcG34AY.250.000018
ORF1ab/nsp1634A34AgcAgcT14AY.250.000006
ORF1ab/nsp1634A34VgCagTa44AY.29.10.000882
ORF1ab/nsp1634A34AgcAgcT24AY.430.000009
ORF1ab/nsp1634A34AgcAgcG24AY.430.000009
ORF1ab/nsp1634A34VgCagTa44AY.90.00027
ORF1ab/nsp1634A34VgCagTa44B.1.1.3060.001754
ORF1ab/nsp1634A34VgCagTa44B.1.1.4330.005698
ORF1ab/nsp1634A34AgcAgcG34B.1.20.000026
ORF1ab/nsp1634A34AgcAgcT14B.1.20.000009
ORF1ab/nsp1634A34VgCagTa44B.1.2370.0199
ORF1ab/nsp1634A34VgCagTa44B.1.4250.011976
ORF1ab/nsp1634A34VgCagTa44B.1.438.40.085106
ORF1ab/nsp1634A34VgCagTa44B.1.5250.000453
ORF1ab/nsp1634A34EgCagAa44B.1.5260.000094
ORF1ab/nsp1634A34VgCagTa44C.360.003643
ORF1ab/nsp1634A34AgcAgcG33AY.1000.000138
ORF1ab/nsp1634A34VgCagTa33AY.360.000445
ORF1ab/nsp1634A34VgCagTa33AY.39.10.000119
ORF1ab/nsp1634A34TGcaAca33AY.40.000005
ORF1ab/nsp1634A34AgcAgcT33AY.470.000093
ORF1ab/nsp1634A34VgCagTa33AY.5.30.001012
ORF1ab/nsp1634A34VgCagTa33AY.550.002752
ORF1ab/nsp1634A34SGcaTca33AY.60.000123
ORF1ab/nsp1634A34VgCagTa33AY.700.000626
ORF1ab/nsp1634A34VgCagTa33AY.840.001312
ORF1ab/nsp1634A34EgCagAa33AY.880.002653
ORF1ab/nsp1634A34SGcaTca33AY.98.10.000145
ORF1ab/nsp1634A34VgCagTa33B0.000383
ORF1ab/nsp1634A34SGcaTca33B.1.10.000054
ORF1ab/nsp1634A34SGcaTca33B.1.1.2160.002671
ORF1ab/nsp1634A34VgCagTa33B.1.1.3170.001235
ORF1ab/nsp1634A34VgCagTa33B.1.1.3180.000905
ORF1ab/nsp1634A34VgCagTa33B.1.1.370.000579
ORF1ab/nsp1634A34VgCagTa33B.1.1.4340.001046
ORF1ab/nsp1634A34VgCagTa33B.1.1310.026316
ORF1ab/nsp1634A34VgCagTa33B.1.1460.012712
ORF1ab/nsp1634A34VgCagTa33B.1.177.560.002003
ORF1ab/nsp1634A34VgCagTa33B.1.177.810.000568
ORF1ab/nsp1634A34VgCagTa33B.1.2060.002447
ORF1ab/nsp1634A34VgCagTa33B.1.240.10.075
ORF1ab/nsp1634A34VgCagTa33B.1.2410.002435
ORF1ab/nsp1634A34AgcAgcT33B.1.2430.000209
ORF1ab/nsp1634A34AgcAgcT33B.1.3510.000089
ORF1ab/nsp1634A34SGcaTca33B.1.4990.003151
ORF1ab/nsp1634A34VgCagTa33B.1.5230.007353
ORF1ab/nsp1634A34VgCagTa33B.1.5880.00273
ORF1ab/nsp1634A34SGcaTca23B.1.617.20.000008
ORF1ab/nsp1634A34SGcATcT13B.1.617.20.000004
ORF1ab/nsp1634A34VgCagTa33C.37.10.007853
ORF1ab/nsp1634A34VgCagTa33D.20.000225
ORF1ab/nsp1634A34VgCagTa33Q.30.000435
ORF1ab/nsp1634A34TGcAAcT120.055556
ORF1ab/nsp1634A34TGcaAca120.055556
ORF1ab/nsp1634A34VgCagTa22A.23.10.001408
ORF1ab/nsp1634A34VgCagTa22AE.80.000978
ORF1ab/nsp1634A34del2GCa--a22All0
ORF1ab/nsp1634A34XGCaTGa22All0
ORF1ab/nsp1634A34TGcaAca22AY.1020.000053
ORF1ab/nsp1634A34EgCagAa22AY.1020.000053
ORF1ab/nsp1634A34VgCagTa22AY.16.10.00094
ORF1ab/nsp1634A34VgCagTa22AY.23.10.000835
ORF1ab/nsp1634A34delGCA---22AY.250.000012
ORF1ab/nsp1634A34SGcaTca22AY.290.000032
ORF1ab/nsp1634A34AgcAgcG12AY.30.00001
ORF1ab/nsp1634A34AgcAgcT12AY.30.00001
ORF1ab/nsp1634A34VgCagTa22AY.300.000791
ORF1ab/nsp1634A34VgCagTa22AY.320.001065
ORF1ab/nsp1634A34VgCagTa22AY.370.000632
ORF1ab/nsp1634A34SGcaTca22AY.390.000049
ORF1ab/nsp1634A34EgCagAa22AY.390.000049
ORF1ab/nsp1634A34VgCagTa22AY.39.1.10.001449
ORF1ab/nsp1634A34delGCA---22AY.4.50.000215
ORF1ab/nsp1634A34VgCagTa22AY.4.50.000215
ORF1ab/nsp1634A34TGcaAca22AY.440.000012
ORF1ab/nsp1634A34EgCagAa22AY.460.000208
ORF1ab/nsp1634A34AgcAgcC12AY.46.60.000072
ORF1ab/nsp1634A34AgcAgcT12AY.46.60.000072
ORF1ab/nsp1634A34VgCagTa22AY.530.000575
ORF1ab/nsp1634A34VgCagTa22AY.540.000191
ORF1ab/nsp1634A34VgCagTa22AY.650.001066
ORF1ab/nsp1634A34SGcaTca22AY.9.10.000167
ORF1ab/nsp1634A34AgcAgcG22AY.9.20.000073
ORF1ab/nsp1634A34AgcAgcT22AY.980.000158
ORF1ab/nsp1634A34VgCagTa22AZ.20.001642
ORF1ab/nsp1634A34EgCagAa22B.10.000018
ORF1ab/nsp1634A34TGcaAca22B.10.000018
ORF1ab/nsp1634A34PGcaCca22B.10.000018
ORF1ab/nsp1634A34VgCagTa22B.1.1.10.000653
ORF1ab/nsp1634A34VgCagTa22B.1.1.100.00223
ORF1ab/nsp1634A34VgCagTa22B.1.1.1160.125
ORF1ab/nsp1634A34VgCagTa22B.1.1.1300.030769
ORF1ab/nsp1634A34VgCagTa22B.1.1.1600.047619
ORF1ab/nsp1634A34VgCagTa22B.1.1.1700.002494
ORF1ab/nsp1634A34VgCagTa22B.1.1.2140.000111
ORF1ab/nsp1634A34VgCagTa22B.1.1.2160.001781
ORF1ab/nsp1634A34VgCagTa22B.1.1.2360.013793
ORF1ab/nsp1634A34VgCagTa22B.1.1.2430.008163
ORF1ab/nsp1634A34VgCagTa22B.1.1.2840.000215
ORF1ab/nsp1634A34VgCagTa22B.1.1.3120.003824
ORF1ab/nsp1634A34VgCagTa22B.1.1.3260.003521
ORF1ab/nsp1634A34VgCagTa22B.1.1.3680.006173
ORF1ab/nsp1634A34VgCagTa22B.1.1.3720.001377
ORF1ab/nsp1634A34VgCagTa22B.1.1.4090.005666
ORF1ab/nsp1634A34VgCagTa22B.1.1.4170.005405
ORF1ab/nsp1634A34EgCagAa22B.1.1.70.000002
ORF1ab/nsp1634A34VgCagTa22B.1.110.10.2
ORF1ab/nsp1634A34delGCA---22B.1.1770.000026
ORF1ab/nsp1634A34AgcAgcT22B.1.1770.000026
ORF1ab/nsp1634A34VgCagTa22B.1.177.120.000303
ORF1ab/nsp1634A34VgCagTa22B.1.177.600.000437
ORF1ab/nsp1634A34VgCagTa22B.1.177.750.002081
ORF1ab/nsp1634A34VgCagTa22B.1.1990.008264
ORF1ab/nsp1634A34TGcaAca22B.1.20.000018
ORF1ab/nsp1634A34VgCagTa22B.1.214.20.001199
ORF1ab/nsp1634A34VgCagTa22B.1.214.30.014286
ORF1ab/nsp1634A34AgcAgcC22B.1.2210.000142
ORF1ab/nsp1634A34AgcAgcT22B.1.3050.004301
ORF1ab/nsp1634A34TGcaAca22B.1.3230.041667
ORF1ab/nsp1634A34SGcaTca22B.1.3510.000059
ORF1ab/nsp1634A34VgCagTa22B.1.36.290.001035
ORF1ab/nsp1634A34VgCagTa22B.1.36.310.003503
ORF1ab/nsp1634A34VgCagTa22B.1.3810.015625
ORF1ab/nsp1634A34AgcAgcG22B.1.4290.000047
ORF1ab/nsp1634A34VgCagTa22B.1.4700.002809
ORF1ab/nsp1634A34SGcaTca22B.1.5250.000226
ORF1ab/nsp1634A34TGcaAca22B.1.5260.000047
ORF1ab/nsp1634A34VgCagTa22B.1.5300.014286
ORF1ab/nsp1634A34VgCagTa22B.1.5510.002581
ORF1ab/nsp1634A34VgCagTa22B.1.5820.000981
ORF1ab/nsp1634A34AgcAgcG22B.1.5960.000174
ORF1ab/nsp1634A34VgCagTa22B.1.6090.000959
ORF1ab/nsp1634A34VgCagTa22C.110.021277
ORF1ab/nsp1634A34VgCagTa22C.160.002121
ORF1ab/nsp1634A34VgCagTa22P.1.150.000465
ORF1ab/nsp1634A34VgCagTa22Q.20.001227
ORF1ab/nsp1634A34AgcAgcT110.055556
ORF1ab/nsp1634A34KGCaAAa110.055556
ORF1ab/nsp1634A34NGCAAAT110.055556
ORF1ab/nsp1634A34DgCAgAT110.055556
ORF1ab/nsp1634A34EgCagAa110.055556
ORF1ab/nsp1634A34VgCagTa11A.230.010526
ORF1ab/nsp1634A34AgcAgcG11AD.20.000219
ORF1ab/nsp1634A34NGCAAAT11All0
ORF1ab/nsp1634A34IGCaATa11All0
ORF1ab/nsp1634A34DgCAgAT11All0
ORF1ab/nsp1634A34del1gcAgc-11All0
ORF1ab/nsp1634A34KGCaAAa11All0
ORF1ab/nsp1634A34VgCagTa11AU.30.00211
ORF1ab/nsp1634A34VgCagTa11AY.10.000396
ORF1ab/nsp1634A34TGcaAca11AY.1000.000046
ORF1ab/nsp1634A34AgcAgcG11AY.1020.000027
ORF1ab/nsp1634A34TGcaAca11AY.1030.000006
ORF1ab/nsp1634A34AgcAgcG11AY.1040.001984
ORF1ab/nsp1634A34VgCagTa11AY.1040.001984
ORF1ab/nsp1634A34EgCagAa11AY.1060.000335
ORF1ab/nsp1634A34TGcaAca11AY.1130.000142
ORF1ab/nsp1634A34VgCagTa11AY.116.10.000311
ORF1ab/nsp1634A34TGcaAca11AY.1200.000037
ORF1ab/nsp1634A34SGcaTca11AY.1200.000037
ORF1ab/nsp1634A34VgCagTa11AY.120.10.000321
ORF1ab/nsp1634A34VgCagTa11AY.120.20.001285
ORF1ab/nsp1634A34AgcAgcT11AY.130.000161
ORF1ab/nsp1634A34SGcaTca11AY.140.000088
ORF1ab/nsp1634A34EgCagAa11AY.240.000431
ORF1ab/nsp1634A34delGCA---11AY.30.00001
ORF1ab/nsp1634A34EgCagAa11AY.330.000067
ORF1ab/nsp1634A34VgCagTa11AY.350.000233
ORF1ab/nsp1634A34AgcAgcG11AY.390.000025
ORF1ab/nsp1634A34delGCA---11AY.40.000002
ORF1ab/nsp1634A34EgCagAa11AY.4.20.000022
ORF1ab/nsp1634A34SGcaTca11AY.4.20.000022
ORF1ab/nsp1634A34VgCagTa11AY.4.30.000842
ORF1ab/nsp1634A34VgCagTa11AY.4.40.000409
ORF1ab/nsp1634A34AgcAgcG11AY.4.50.000107
ORF1ab/nsp1634A34PGcaCca11AY.430.000004
ORF1ab/nsp1634A34del2GCa--a11AY.430.000004
ORF1ab/nsp1634A34AgcAgcG11AY.440.000006
ORF1ab/nsp1634A34delGCA---11AY.440.000006
ORF1ab/nsp1634A34EgCagAa11AY.440.000006
ORF1ab/nsp1634A34AgcAgcT11AY.450.000122
ORF1ab/nsp1634A34VgCagTa11AY.46.20.000635
ORF1ab/nsp1634A34VgCagTa11AY.46.30.000934
ORF1ab/nsp1634A34EgCagAa11AY.46.40.000165
ORF1ab/nsp1634A34delGCA---11AY.46.60.000072
ORF1ab/nsp1634A34EgCagAa11AY.46.60.000072
ORF1ab/nsp1634A34VgCagTa11AY.480.000465
ORF1ab/nsp1634A34AgcAgcG11AY.50.000021
ORF1ab/nsp1634A34VgCagTa11AY.510.000909
ORF1ab/nsp1634A34VgCagTa11AY.520.000814
ORF1ab/nsp1634A34SGcaTca11AY.520.000814
ORF1ab/nsp1634A34VgCagTa11AY.570.000656
ORF1ab/nsp1634A34TGcaAca11AY.60.000041
ORF1ab/nsp1634A34AgcAgcG11AY.610.000105
ORF1ab/nsp1634A34delGCA---11AY.670.000464
ORF1ab/nsp1634A34VgCagTa11AY.7.20.000559
ORF1ab/nsp1634A34AgcAgcG11AY.740.000116
ORF1ab/nsp1634A34SGcATcG11AY.840.000437
ORF1ab/nsp1634A34AgcAgcC11AY.850.000427
ORF1ab/nsp1634A34VgCagTa11AY.9.10.000084
ORF1ab/nsp1634A34EgCagAa11AY.9.20.000037
ORF1ab/nsp1634A34VgCagTa11AY.900.000684
ORF1ab/nsp1634A34VgCagTa11AY.960.002075
ORF1ab/nsp1634A34EgCagAa11AY.98.10.000048
ORF1ab/nsp1634A34TGcaAca11AY.99.20.000092
ORF1ab/nsp1634A34VgCagTa11AZ.10.000867
ORF1ab/nsp1634A34delGCA---11B.10.000009
ORF1ab/nsp1634A34del1gcAgc-11B.10.000009
ORF1ab/nsp1634A34GgCagGa11B.10.000009
ORF1ab/nsp1634A34delGCA---11B.1.10.000018
ORF1ab/nsp1634A34VgCagTa11B.1.1.1250.010204
ORF1ab/nsp1634A34VgCagTa11B.1.1.1410.002012
ORF1ab/nsp1634A34VgCagTa11B.1.1.1760.000439
ORF1ab/nsp1634A34VgCagTa11B.1.1.1920.002309
ORF1ab/nsp1634A34VgCagTa11B.1.1.2310.003096
ORF1ab/nsp1634A34VgCagTa11B.1.1.2630.001558
ORF1ab/nsp1634A34SGcaTca11B.1.1.2750.011236
ORF1ab/nsp1634A34VgCagTa11B.1.1.3010.001179
ORF1ab/nsp1634A34VgCagTa11B.1.1.3040.002809
ORF1ab/nsp1634A34VgCagTa11B.1.1.3050.003861
ORF1ab/nsp1634A34VgCagTa11B.1.1.3110.000358
ORF1ab/nsp1634A34AgcAgcG11B.1.1.3150.008475
ORF1ab/nsp1634A34VgCagTa11B.1.1.3160.000925
ORF1ab/nsp1634A34SGcaTca11B.1.1.3170.000412
ORF1ab/nsp1634A34VgCagTa11B.1.1.3220.008772
ORF1ab/nsp1634A34SGcaTca11B.1.1.330.000421
ORF1ab/nsp1634A34VgCagTa11B.1.1.3350.012987
ORF1ab/nsp1634A34VgCagTa11B.1.1.3480.000796
ORF1ab/nsp1634A34VgCagTa11B.1.1.3690.000446
ORF1ab/nsp1634A34delGCA---11B.1.1.370.000193
ORF1ab/nsp1634A34VgCagTa11B.1.1.3700.012658
ORF1ab/nsp1634A34VgCagTa11B.1.1.3740.002375
ORF1ab/nsp1634A34VgCagTa11B.1.1.3850.004464
ORF1ab/nsp1634A34VgCagTa11B.1.1.390.00051
ORF1ab/nsp1634A34VgCagTa11B.1.1.3970.002252
ORF1ab/nsp1634A34VgCagTa11B.1.1.4010.066667
ORF1ab/nsp1634A34GgCagGa11B.1.1.4110.014706
ORF1ab/nsp1634A34VgCagTa11B.1.1.4590.015385
ORF1ab/nsp1634A34VgCagTa11B.1.1.4870.005587
ORF1ab/nsp1634A34VgCagTa11B.1.1.500.000679
ORF1ab/nsp1634A34AgcAgcG11B.1.1.5190.00004
ORF1ab/nsp1634A34VgCagTa11B.1.1.5250.005464
ORF1ab/nsp1634A34VgCagTa11B.1.1.5260.003546
ORF1ab/nsp1634A34del2GCa--a11B.1.1.70.000001
ORF1ab/nsp1634A34VgCagTa11B.1.1.700.000341
ORF1ab/nsp1634A34VgCagTa11B.1.1.830.00271
ORF1ab/nsp1634A34VgCagTa11B.1.110.30.000718
ORF1ab/nsp1634A34VgCagTa11B.1.1110.001175
ORF1ab/nsp1634A34SGcaTca11B.1.1150.021739
ORF1ab/nsp1634A34TGcaAca11B.1.1170.0125
ORF1ab/nsp1634A34VgCagTa11B.1.1200.007692
ORF1ab/nsp1634A34VgCagTa11B.1.1390.000733
ORF1ab/nsp1634A34VgCagTa11B.1.1570.002985
ORF1ab/nsp1634A34EgCagAa11B.1.1600.000031
ORF1ab/nsp1634A34AgcAgcG11B.1.1600.000031
ORF1ab/nsp1634A34VgCagTa11B.1.160.140.002119
ORF1ab/nsp1634A34VgCagTa11B.1.160.70.002079
ORF1ab/nsp1634A34VgCagTa11B.1.1640.014925
ORF1ab/nsp1634A34TGcaAca11B.1.1770.000013
ORF1ab/nsp1634A34delGCA---11B.1.177.170.000821
ORF1ab/nsp1634A34VgCagTa11B.1.177.180.00116
ORF1ab/nsp1634A34VgCagTa11B.1.177.210.000076
ORF1ab/nsp1634A34VgCagTa11B.1.177.330.001645
ORF1ab/nsp1634A34VgCagTa11B.1.177.350.000691
ORF1ab/nsp1634A34VgCagTa11B.1.177.440.000519
ORF1ab/nsp1634A34VgCagTa11B.1.177.520.001757
ORF1ab/nsp1634A34VgCagTa11B.1.177.530.002392
ORF1ab/nsp1634A34SGcaTca11B.1.177.620.001192
ORF1ab/nsp1634A34VgCagTa11B.1.177.650.000665
ORF1ab/nsp1634A34SGcaTca11B.1.177.650.000665
ORF1ab/nsp1634A34AgcAgcT11B.1.177.70.000165
ORF1ab/nsp1634A34VgCagTa11B.1.177.730.000566
ORF1ab/nsp1634A34delGCA---11B.1.177.730.000566
ORF1ab/nsp1634A34TGcaAca11B.1.1900.01
ORF1ab/nsp1634A34delGCA---11B.1.20.000009
ORF1ab/nsp1634A34PGcaCca11B.1.20.000009
ORF1ab/nsp1634A34SGcaTca11B.1.20.000009
ORF1ab/nsp1634A34GgCagGa11B.1.2210.000071
ORF1ab/nsp1634A34XGCaTGa11B.1.2210.000071
ORF1ab/nsp1634A34SGcaTca11B.1.2210.000071
ORF1ab/nsp1634A34VgCagTa11B.1.2220.001692
ORF1ab/nsp1634A34SGcaTca11B.1.2340.000132
ORF1ab/nsp1634A34VgCagTa11B.1.2390.001221
ORF1ab/nsp1634A34SGcaTca11B.1.243.10.022222
ORF1ab/nsp1634A34delGCA---11B.1.2580.000067
ORF1ab/nsp1634A34SGcaTca11B.1.2580.000067
ORF1ab/nsp1634A34PGcaCca11B.1.258.170.000104
ORF1ab/nsp1634A34VgCagTa11B.1.2840.013158
ORF1ab/nsp1634A34VgCagTa11B.1.3060.005714
ORF1ab/nsp1634A34VgCagTa11B.1.3200.001245
ORF1ab/nsp1634A34VgCagTa11B.1.3230.020833
ORF1ab/nsp1634A34delGCA---11B.1.3260.007576
ORF1ab/nsp1634A34AgcAgcT11B.1.36.180.00042
ORF1ab/nsp1634A34VgCagTa11B.1.36.280.005747
ORF1ab/nsp1634A34AgcAgcT11B.1.36.350.002604
ORF1ab/nsp1634A34VgCagTa11B.1.36.360.000602
ORF1ab/nsp1634A34VgCagTa11B.1.36.80.001
ORF1ab/nsp1634A34SGcaTca11B.1.36.90.003215
ORF1ab/nsp1634A34VgCagTa11B.1.3610.001289
ORF1ab/nsp1634A34VgCagTa11B.1.3670.000792
ORF1ab/nsp1634A34TGcaAca11B.1.3670.000792
ORF1ab/nsp1634A34AgcAgcT11B.1.3690.000285
ORF1ab/nsp1634A34SGcaTca11B.1.3690.000285
ORF1ab/nsp1634A34VgCagTa11B.1.3780.006849
ORF1ab/nsp1634A34VgCagTa11B.1.4010.008197
ORF1ab/nsp1634A34VgCagTa11B.1.4040.001302
ORF1ab/nsp1634A34VgCagTa11B.1.4070.035714
ORF1ab/nsp1634A34VgCagTa11B.1.4090.000781
ORF1ab/nsp1634A34TGcaAca11B.1.4090.000781
ORF1ab/nsp1634A34VgCagTa11B.1.4160.001269
ORF1ab/nsp1634A34VgCagTa11B.1.4200.010417
ORF1ab/nsp1634A34VgCagTa11B.1.4210.007463
ORF1ab/nsp1634A34VgCagTa11B.1.4260.001009
ORF1ab/nsp1634A34TGcaAca11B.1.4270.00005
ORF1ab/nsp1634A34IGCaATa11B.1.4290.000024
ORF1ab/nsp1634A34VgCagTa11B.1.4330.003195
ORF1ab/nsp1634A34VgCagTa11B.1.4380.006536
ORF1ab/nsp1634A34VgCagTa11B.1.4530.003236
ORF1ab/nsp1634A34VgCagTa11B.1.4690.00361
ORF1ab/nsp1634A34delGCA---11B.1.5250.000113
ORF1ab/nsp1634A34XGCaTGa11B.1.5250.000113
ORF1ab/nsp1634A34delGCA---11B.1.5260.000024
ORF1ab/nsp1634A34VgCagTa11B.1.5270.003704
ORF1ab/nsp1634A34VgCagTa11B.1.5380.008065
ORF1ab/nsp1634A34VgCagTa11B.1.5680.001111
ORF1ab/nsp1634A34SGcaTca11B.1.5960.000087
ORF1ab/nsp1634A34VgCagTa11B.1.5990.00365
ORF1ab/nsp1634A34TGcaAca11B.1.617.10.000129
ORF1ab/nsp1634A34delGCA---11B.1.617.20.000004
ORF1ab/nsp1634A34TGcaAca11B.1.617.20.000004
ORF1ab/nsp1634A34GgCagGa11B.1.617.20.000004
ORF1ab/nsp1634A34VgCagTa11B.1.617.30.002985
ORF1ab/nsp1634A34delGCA---11B.1.6200.000946
ORF1ab/nsp1634A34VgCagTa11B.1.6230.000536
ORF1ab/nsp1634A34VgCagTa11B.1.6270.00202
ORF1ab/nsp1634A34VgCagTa11B.1.6280.000352
ORF1ab/nsp1634A34VgCagTa11B.1.780.008547
ORF1ab/nsp1634A34VgCagTa11B.1.90.006173
ORF1ab/nsp1634A34VgCagTa11B.100.008264
ORF1ab/nsp1634A34VgCagTa11B.330.021277
ORF1ab/nsp1634A34EgCagAa11B.4.40.018868
ORF1ab/nsp1634A34VgCagTa11B.520.010101
ORF1ab/nsp1634A34VgCagTa11C.120.007194
ORF1ab/nsp1634A34VgCagTa11C.350.000774
ORF1ab/nsp1634A34AgcAgcG11C.370.000116
ORF1ab/nsp1634A34VgCagTa11C.90.030303
ORF1ab/nsp1634A34SGcaTca11D.20.000075
ORF1ab/nsp1634A34TGcaAca11P.10.000016
ORF1ab/nsp1634A34AgcAgcG11P.10.000016
ORF1ab/nsp1634A34AgcAgcC11P.1.100.000269
ORF1ab/nsp1634A34AgcAgcG11P.1.140.000048
ORF1ab/nsp1634A34delGCA---11P.1.150.000232
ORF1ab/nsp1634A34AgcAgcT11P.1.70.000319
ORF1ab/nsp1634A34VgCagTa11P.1.90.004808
ORF1ab/nsp1634A34VgCagTa11P.30.001595
ORF1ab/nsp1634A34VgCagTa11Q.10.000126
ORF1ab/nsp1634A34AgcAgcG11Q.10.000126
ORF1ab/nsp1634A34AgcAgcT11Q.70.001111
ORF1ab/nsp1634A34VgCagTa11Q.70.001111
ORF1ab/nsp1634A34AgcAgcC11R.10.00009
ORF1ab/nsp1634A34VgCagTa11R.10.00009