CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 33

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1633S33IS6831InonsynaGtaTt155715540.99807320755-20757
ORF1ab/nsp1633S33IS6831InonsynaGTaTA155720.0012845220755-20757
ORF1ab/nsp1633S33IS6831InonsynaGTaTC155710.00064226120755-20757
ORF1ab/nsp1633S33SS6831SsynagTagC7587570.99868120755-20757
ORF1ab/nsp1633S33SS6831SsynAGTTCG75810.0013192620755-20757
ORF1ab/nsp1633S33GS6831GnonsynAgtGgt5655620.9946920755-20757
ORF1ab/nsp1633S33GS6831GnonsynAgTGgA56520.0035398220755-20757
ORF1ab/nsp1633S33GS6831GnonsynAgTGgC56510.0017699120755-20757
ORF1ab/nsp1633S33RS6831RnonsynAgtCgt5395110.94805220755-20757
ORF1ab/nsp1633S33RS6831RnonsynagTagA539140.02597420755-20757
ORF1ab/nsp1633S33RS6831RnonsynagTagG539140.02597420755-20757
ORF1ab/nsp1633S33NS6831NnonsynaGtaAt2102090.99523820755-20757
ORF1ab/nsp1633S33NS6831NnonsynaGTaAC21010.004761920755-20757
ORF1ab/nsp1633S33delS6831deldelAGT---4343120755-20757
ORF1ab/nsp1633S33KS6831KnonsynaGTaAA2626120755-20757
ORF1ab/nsp1633S33CS6831CnonsynAgtTgt19180.94736820755-20757
ORF1ab/nsp1633S33CS6831CnonsynAgTTgC1910.052631620755-20757
ORF1ab/nsp1633S33TS6831TnonsynaGtaCt77120755-20757
ORF1ab/nsp1633S33del2S6831del2delAGt--t55120755-20757
ORF1ab/nsp1633S33WS6831WnonsynAgTTgG33120755-20757
ORF1ab/nsp1633S33VS6831VnonsynAGtGTt320.66666720755-20757
ORF1ab/nsp1633S33del1S6831del1delAGt-At310.33333320755-20757
ORF1ab/nsp1633S33del1S6831del1delagTag-310.33333320755-20757
ORF1ab/nsp1633S33VS6831VnonsynAGTGTA310.33333320755-20757
ORF1ab/nsp1633S33del1S6831del1delAgt-gt310.33333320755-20757
ORF1ab/nsp1633S33FS6831FnonsynAGtTTt22120755-20757
ORF1ab/nsp1633S33ES6831EnonsynAGTGAA22120755-20757
ORF1ab/nsp1633S33DS6831DnonsynAGtGAt11120755-20757
ORF1ab/nsp1633S33LS6831LnonsynAGtCTt11120755-20757

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1633S33IaGtaTt15541557All0.000297
ORF1ab/nsp1633S33IaGTaTA21557All0
ORF1ab/nsp1633S33IaGTaTC11557All0
ORF1ab/nsp1633S33SagTagC757758All0.000145
ORF1ab/nsp1633S33SAGTTCG1758All0
ORF1ab/nsp1633S33GAgtGgt562565All0.000107
ORF1ab/nsp1633S33GAgTGgA2565All0
ORF1ab/nsp1633S33GAgTGgC1565All0
ORF1ab/nsp1633S33RAgtCgt511539All0.000098
ORF1ab/nsp1633S33RagTagG14539All0.000003
ORF1ab/nsp1633S33RagTagA14539All0.000003
ORF1ab/nsp1633S33SagTagC465465B.1.1.70.000416
ORF1ab/nsp1633S33RAgtCgt370370B.10.003389
ORF1ab/nsp1633S33NaGtaAt209210All0.00004
ORF1ab/nsp1633S33NaGTaAC1210All0
ORF1ab/nsp1633S33GAgtGgt208208AY.1130.029617
ORF1ab/nsp1633S33IaGtaTt201201B.1.6210.017792
ORF1ab/nsp1633S33IaGtaTt194194B.1.617.20.00073
ORF1ab/nsp1633S33IaGtaTt149149B.1.1.70.000133
ORF1ab/nsp1633S33IaGtaTt136136AY.430.000603
ORF1ab/nsp1633S33IaGtaTt130130AY.1020.003447
ORF1ab/nsp1633S33SagTagC118118B.1.1.2430.481633
ORF1ab/nsp1633S33GAgtGgt108108B.1.1.70.000097
ORF1ab/nsp1633S33IaGtaTt9393AY.40.000145
ORF1ab/nsp1633S33RAgtCgt7777B.1.4450.905882
ORF1ab/nsp1633S33IaGtaTt7575B.1.3980.223214
ORF1ab/nsp1633S33NaGtaAt6868B.1.4290.0016
ORF1ab/nsp1633S33IaGtaTt4646AY.250.000277
ORF1ab/nsp1633S33NaGtaAt4444AY.30.000438
ORF1ab/nsp1633S33delAGT---4343All0.000008
ORF1ab/nsp1633S33GAgtGgt3940B.1.617.20.000147
ORF1ab/nsp1633S33GAgTGgC140B.1.617.20.000004
ORF1ab/nsp1633S33IaGtaTt3737B.1.10.000671
ORF1ab/nsp1633S33SagTagC3737B.1.5270.137037
ORF1ab/nsp1633S33GAgtGgt3535AY.1180.002193
ORF1ab/nsp1633S33GAgtGgt3434B.1.1770.000448
ORF1ab/nsp1633S33IaGtaTt3434B.1.1770.000448
ORF1ab/nsp1633S33IaGtaTt3131B.1.5260.000729
ORF1ab/nsp1633S33RAgtCgt2929B.1.3081
ORF1ab/nsp1633S33KaGTaAA2626All0.000005
ORF1ab/nsp1633S33IaGtaTt2424B.1.177.810.004544
ORF1ab/nsp1633S33NaGtaAt2323B.1.438.10.002467
ORF1ab/nsp1633S33IaGtaTt2222AY.440.000134
ORF1ab/nsp1633S33SagTagC2121B.1.6210.001859
ORF1ab/nsp1633S33RAgtCgt2020B.1.3100.952381
ORF1ab/nsp1633S33CAgtTgt1819All0.000003
ORF1ab/nsp1633S33CAgTTgC119All0
ORF1ab/nsp1633S33KaGTaAA1919B.1.4290.000447
ORF1ab/nsp1633S33GAgtGgt1919P.10.000299
ORF1ab/nsp1633S33SagTagC1818AY.40.000028
ORF1ab/nsp1633S33IaGtaTt1515B.10.000137
ORF1ab/nsp1633S33IaGtaTt1414AY.390.000346
ORF1ab/nsp1633S33IaGtaTt1414B.1.214.30.1
ORF1ab/nsp1633S33IaGtaTt1313AY.260.000368
ORF1ab/nsp1633S33IaGtaTt1313AY.290.000205
ORF1ab/nsp1633S33SagTagC1313B.1.1.4640.019146
ORF1ab/nsp1633S33IaGtaTt1313B.1.1.5210.069519
ORF1ab/nsp1633S33IaGtaTt1212AY.1030.000075
ORF1ab/nsp1633S33IaGtaTt1212AY.99.20.001106
ORF1ab/nsp1633S33IaGtaTt1111AY.1000.000506
ORF1ab/nsp1633S33NaGtaAt1111AY.250.000066
ORF1ab/nsp1633S33GAgtGgt1010AY.350.00233
ORF1ab/nsp1633S33IaGtaTt1010AY.4.20.000217
ORF1ab/nsp1633S33delAGT---1010B.1.1.70.000009
ORF1ab/nsp1633S33IaGtaTt99AY.1200.000335
ORF1ab/nsp1633S33GAgtGgt99AY.46.50.001786
ORF1ab/nsp1633S33IaGtaTt99AY.9.20.000331
ORF1ab/nsp1633S33IaGtaTt99B.1.20.000079
ORF1ab/nsp1633S33IaGtaTt88AY.30.00008
ORF1ab/nsp1633S33SagTagC88B.1.10.000145
ORF1ab/nsp1633S33NaGtaAt88C.140.034632
ORF1ab/nsp1633S33IaGtaTt77A.2.50.003493
ORF1ab/nsp1633S33TaGtaCt77All0.000001
ORF1ab/nsp1633S33GAgtGgt77AY.1030.000043
ORF1ab/nsp1633S33IaGtaTt77AY.200.000272
ORF1ab/nsp1633S33GAgtGgt77AY.250.000042
ORF1ab/nsp1633S33IaGtaTt77AY.50.000145
ORF1ab/nsp1633S33IaGtaTt77AY.530.002013
ORF1ab/nsp1633S33IaGtaTt77B.1.1.2320.012704
ORF1ab/nsp1633S33IaGtaTt77B.1.1.3030.019337
ORF1ab/nsp1633S33SagTagC77B.1.617.20.000026
ORF1ab/nsp1633S33delAGT---660.333333
ORF1ab/nsp1633S33IaGtaTt66AY.140.000528
ORF1ab/nsp1633S33GAgtGgt66AY.40.000009
ORF1ab/nsp1633S33NaGtaAt66AY.40.000009
ORF1ab/nsp1633S33IaGtaTt66AY.460.000624
ORF1ab/nsp1633S33GAgtGgt66AY.50.000124
ORF1ab/nsp1633S33GAgtGgt66B.1.177.40.001266
ORF1ab/nsp1633S33SagTagC66B.1.20.000053
ORF1ab/nsp1633S33IaGtaTt66B.1.4290.000141
ORF1ab/nsp1633S33IaGtaTt66B.1.5960.000523
ORF1ab/nsp1633S33del2AGt--t55All0.000001
ORF1ab/nsp1633S33SagTagC55AY.1030.000031
ORF1ab/nsp1633S33GAgtGgt55AY.3.10.000426
ORF1ab/nsp1633S33GAgtGgt45AY.430.000018
ORF1ab/nsp1633S33GAgTGgA15AY.430.000004
ORF1ab/nsp1633S33NaGtaAt55B.10.000046
ORF1ab/nsp1633S33RAgtCgt55B.1.1.5190.000199
ORF1ab/nsp1633S33IaGtaTt55B.1.3510.000149
ORF1ab/nsp1633S33NaGtaAt55B.1.617.20.000019
ORF1ab/nsp1633S33IaGtaTt55P.10.000079
ORF1ab/nsp1633S33GAgtGgt55R.10.00045
ORF1ab/nsp1633S33CAgtTgt44AY.120.10.001284
ORF1ab/nsp1633S33SagTagC34AY.430.000013
ORF1ab/nsp1633S33SAGTTCG14AY.430.000004
ORF1ab/nsp1633S33IaGtaTt44AY.46.50.000794
ORF1ab/nsp1633S33GAgtGgt44AY.470.000124
ORF1ab/nsp1633S33IaGtaTt44AY.610.000419
ORF1ab/nsp1633S33RagTagG34B.1.10.000054
ORF1ab/nsp1633S33RagTagA14B.1.10.000018
ORF1ab/nsp1633S33IaGtaTt44B.1.1.2140.000222
ORF1ab/nsp1633S33KaGTaAA44B.1.1.70.000004
ORF1ab/nsp1633S33SagTagC44B.1.3510.000119
ORF1ab/nsp1633S33SagTagC44B.1.5680.004444
ORF1ab/nsp1633S33GAgtGgt44B.1.5760.003626
ORF1ab/nsp1633S33NaGtaAt44C.360.003643
ORF1ab/nsp1633S33NaGtaAt44P.10.000063
ORF1ab/nsp1633S33IaGtaTt33A.23.10.002113
ORF1ab/nsp1633S33WAgTTgG33All0.000001
ORF1ab/nsp1633S33VAGtGTt23All0
ORF1ab/nsp1633S33del1AGt-At13All0
ORF1ab/nsp1633S33del1agTag-13All0
ORF1ab/nsp1633S33VAGTGTA13All0
ORF1ab/nsp1633S33del1Agt-gt13All0
ORF1ab/nsp1633S33IaGtaTt33AY.1160.00086
ORF1ab/nsp1633S33IaGtaTt33AY.230.000209
ORF1ab/nsp1633S33TaGtaCt33AY.30.00003
ORF1ab/nsp1633S33GAgtGgt33AY.410.000882
ORF1ab/nsp1633S33GAgtGgt33AY.440.000018
ORF1ab/nsp1633S33IaGtaTt33AY.46.40.000494
ORF1ab/nsp1633S33IaGtaTt33AY.470.000093
ORF1ab/nsp1633S33IaGtaTt33AY.750.000168
ORF1ab/nsp1633S33IaGtaTt33AY.98.10.000145
ORF1ab/nsp1633S33SagTagC33B.10.000027
ORF1ab/nsp1633S33IaGtaTt33B.1.1.100.003344
ORF1ab/nsp1633S33SagTagC33B.1.1.280.000934
ORF1ab/nsp1633S33IaGtaTt33B.1.1.5190.000119
ORF1ab/nsp1633S33NaGtaAt23B.1.1.70.000002
ORF1ab/nsp1633S33NaGTaAC13B.1.1.70.000001
ORF1ab/nsp1633S33IaGtaTt33B.1.160.160.002788
ORF1ab/nsp1633S33NaGtaAt33B.1.20.000026
ORF1ab/nsp1633S33IaGtaTt33B.1.360.000438
ORF1ab/nsp1633S33SagTagC33B.1.416.10.004687
ORF1ab/nsp1633S33RagTagA23B.1.617.20.000008
ORF1ab/nsp1633S33RagTagG13B.1.617.20.000004
ORF1ab/nsp1633S33IaGtaTt33B.1.6370.000219
ORF1ab/nsp1633S33NaGtaAt33C.170.166667
ORF1ab/nsp1633S33NaGtaAt33D.20.000225
ORF1ab/nsp1633S33IaGtaTt33P.1.90.014423
ORF1ab/nsp1633S33IaGTaTA120.055556
ORF1ab/nsp1633S33GAgTGgA120.055556
ORF1ab/nsp1633S33IaGtaTt120.055556
ORF1ab/nsp1633S33VAGTGTA120.055556
ORF1ab/nsp1633S33VAGtGTt120.055556
ORF1ab/nsp1633S33GAgtGgt120.055556
ORF1ab/nsp1633S33IaGtaTt22AD.20.000438
ORF1ab/nsp1633S33EAGTGAA22All0
ORF1ab/nsp1633S33FAGtTTt22All0
ORF1ab/nsp1633S33IaGtaTt22AY.1180.000125
ORF1ab/nsp1633S33IaGtaTt22AY.120.20.002571
ORF1ab/nsp1633S33GAgtGgt22AY.200.000078
ORF1ab/nsp1633S33delAGT---22AY.250.000012
ORF1ab/nsp1633S33GAgtGgt22AY.260.000057
ORF1ab/nsp1633S33IaGtaTt22AY.270.000129
ORF1ab/nsp1633S33SagTagC22AY.34.10.00102
ORF1ab/nsp1633S33delAGT---22AY.4.50.000215
ORF1ab/nsp1633S33WAgTTgG22AY.430.000009
ORF1ab/nsp1633S33NaGtaAt22AY.440.000012
ORF1ab/nsp1633S33IaGtaTt22AY.450.000243
ORF1ab/nsp1633S33NaGtaAt22AY.610.00021
ORF1ab/nsp1633S33IaGtaTt22AY.710.00095
ORF1ab/nsp1633S33IaGTaTC12AY.840.000437
ORF1ab/nsp1633S33IaGtaTt12AY.840.000437
ORF1ab/nsp1633S33IaGtaTt22AY.90.000135
ORF1ab/nsp1633S33SagTagC22AY.9.20.000073
ORF1ab/nsp1633S33IaGtaTt22AY.99.10.003106
ORF1ab/nsp1633S33IaGtaTt22B0.000256
ORF1ab/nsp1633S33GAgtGgt22B.10.000018
ORF1ab/nsp1633S33delAGT---22B.1.10.000036
ORF1ab/nsp1633S33NaGtaAt22B.1.10.000036
ORF1ab/nsp1633S33IaGtaTt22B.1.1.2660.02439
ORF1ab/nsp1633S33IaGtaTt22B.1.1.2980.001724
ORF1ab/nsp1633S33IaGtaTt22B.1.1.3060.000877
ORF1ab/nsp1633S33CAgtTgt22B.1.1.5190.000079
ORF1ab/nsp1633S33CAgtTgt22B.1.1.70.000002
ORF1ab/nsp1633S33GAgtGgt22B.1.1600.000062
ORF1ab/nsp1633S33delAGT---22B.1.1770.000026
ORF1ab/nsp1633S33RagTagA12B.1.1770.000013
ORF1ab/nsp1633S33RAgtCgt12B.1.1770.000013
ORF1ab/nsp1633S33IaGtaTt12B.1.2210.000071
ORF1ab/nsp1633S33IaGTaTA12B.1.2210.000071
ORF1ab/nsp1633S33GAgtGgt22B.1.3200.002491
ORF1ab/nsp1633S33RagTagA22B.1.3230.041667
ORF1ab/nsp1633S33SagTagC22B.1.4290.000047
ORF1ab/nsp1633S33GAgtGgt22B.1.4290.000047
ORF1ab/nsp1633S33RAgtCgt22B.1.4530.006472
ORF1ab/nsp1633S33SagTagC22B.1.4620.014493
ORF1ab/nsp1633S33IaGtaTt22B.1.5440.012048
ORF1ab/nsp1633S33TaGtaCt22B.1.617.20.000008
ORF1ab/nsp1633S33delAGT---22B.1.617.20.000008
ORF1ab/nsp1633S33GAgtGgt22B.1.6200.001892
ORF1ab/nsp1633S33SagTagC22B.1.780.017094
ORF1ab/nsp1633S33IaGtaTt22B.3.10.003317
ORF1ab/nsp1633S33IaGtaTt22D.20.00015
ORF1ab/nsp1633S33IaGtaTt22P.1.70.000639
ORF1ab/nsp1633S33NaGtaAt110.055556
ORF1ab/nsp1633S33KaGTaAA110.055556
ORF1ab/nsp1633S33EAGTGAA110.055556
ORF1ab/nsp1633S33RagTagA110.055556
ORF1ab/nsp1633S33DAGtGAt110.055556
ORF1ab/nsp1633S33RAgtCgt11A0.000387
ORF1ab/nsp1633S33IaGtaTt11A.290.005319
ORF1ab/nsp1633S33LAGtCTt11All0
ORF1ab/nsp1633S33DAGtGAt11All0
ORF1ab/nsp1633S33GAgtGgt11AY.1000.000046
ORF1ab/nsp1633S33NaGtaAt11AY.1030.000006
ORF1ab/nsp1633S33IaGtaTt11AY.1040.001984
ORF1ab/nsp1633S33IaGtaTt11AY.1050.000643
ORF1ab/nsp1633S33CAgtTgt11AY.1110.000183
ORF1ab/nsp1633S33SagTagC11AY.1130.000142
ORF1ab/nsp1633S33KaGTaAA11AY.1130.000142
ORF1ab/nsp1633S33RagTagG11AY.1140.000231
ORF1ab/nsp1633S33IaGtaTt11AY.1170.000085
ORF1ab/nsp1633S33NaGtaAt11AY.1170.000085
ORF1ab/nsp1633S33del2AGt--t11AY.1180.000063
ORF1ab/nsp1633S33SagTagC11AY.1190.000035
ORF1ab/nsp1633S33IaGtaTt11AY.1190.000035
ORF1ab/nsp1633S33NaGtaAt11AY.120.000316
ORF1ab/nsp1633S33SagTagC11AY.1200.000037
ORF1ab/nsp1633S33IaGtaTt11AY.130.000161
ORF1ab/nsp1633S33IaGtaTt11AY.160.00038
ORF1ab/nsp1633S33IaGtaTt11AY.16.10.00047
ORF1ab/nsp1633S33SagTagC11AY.270.000065
ORF1ab/nsp1633S33SagTagC11AY.290.000016
ORF1ab/nsp1633S33NaGtaAt11AY.290.000016
ORF1ab/nsp1633S33delAGT---11AY.30.00001
ORF1ab/nsp1633S33SagTagC11AY.3.10.000085
ORF1ab/nsp1633S33SagTagC11AY.330.000067
ORF1ab/nsp1633S33GAgtGgt11AY.330.000067
ORF1ab/nsp1633S33IaGtaTt11AY.330.000067
ORF1ab/nsp1633S33IaGtaTt11AY.340.000097
ORF1ab/nsp1633S33RagTagG11AY.340.000097
ORF1ab/nsp1633S33CAgtTgt11AY.34.10.00051
ORF1ab/nsp1633S33IaGtaTt11AY.34.10.00051
ORF1ab/nsp1633S33GAgtGgt11AY.360.000148
ORF1ab/nsp1633S33IaGtaTt11AY.370.000316
ORF1ab/nsp1633S33RagTagG11AY.390.000025
ORF1ab/nsp1633S33SagTagC11AY.390.000025
ORF1ab/nsp1633S33GAgtGgt11AY.390.000025
ORF1ab/nsp1633S33CAgtTgt11AY.39.10.00004
ORF1ab/nsp1633S33CAgtTgt11AY.40.000002
ORF1ab/nsp1633S33del2AGt--t11AY.40.000002
ORF1ab/nsp1633S33delAGT---11AY.40.000002
ORF1ab/nsp1633S33TaGtaCt11AY.40.000002
ORF1ab/nsp1633S33RagTagG11AY.4.20.000022
ORF1ab/nsp1633S33CAgtTgt11AY.4.20.000022
ORF1ab/nsp1633S33IaGtaTt11AY.4.50.000107
ORF1ab/nsp1633S33NaGtaAt11AY.420.00004
ORF1ab/nsp1633S33delAGT---11AY.420.00004
ORF1ab/nsp1633S33GAgtGgt11AY.420.00004
ORF1ab/nsp1633S33SagTagC11AY.420.00004
ORF1ab/nsp1633S33CAgTTgC11AY.430.000004
ORF1ab/nsp1633S33RagTagG11AY.430.000004
ORF1ab/nsp1633S33delAGT---11AY.430.000004
ORF1ab/nsp1633S33EAGTGAA11AY.430.000004
ORF1ab/nsp1633S33CAgtTgt11AY.440.000006
ORF1ab/nsp1633S33del1agTag-11AY.440.000006
ORF1ab/nsp1633S33IaGtaTt11AY.46.10.001027
ORF1ab/nsp1633S33IaGtaTt11AY.46.20.000635
ORF1ab/nsp1633S33CAgtTgt11AY.46.60.000072
ORF1ab/nsp1633S33GAgtGgt11AY.46.60.000072
ORF1ab/nsp1633S33WAgTTgG11AY.46.60.000072
ORF1ab/nsp1633S33delAGT---11AY.46.60.000072
ORF1ab/nsp1633S33RagTagG11AY.46.60.000072
ORF1ab/nsp1633S33SagTagC11AY.50.000021
ORF1ab/nsp1633S33RagTagG11AY.5.30.000337
ORF1ab/nsp1633S33IaGtaTt11AY.5.30.000337
ORF1ab/nsp1633S33IaGtaTt11AY.5.40.000277
ORF1ab/nsp1633S33GAgtGgt11AY.540.000095
ORF1ab/nsp1633S33IaGtaTt11AY.550.000917
ORF1ab/nsp1633S33NaGtaAt11AY.570.000656
ORF1ab/nsp1633S33GAgtGgt11AY.580.000907
ORF1ab/nsp1633S33RagTagA11AY.60.000041
ORF1ab/nsp1633S33IaGtaTt11AY.60.000041
ORF1ab/nsp1633S33SagTagC11AY.650.000533
ORF1ab/nsp1633S33delAGT---11AY.670.000464
ORF1ab/nsp1633S33IaGtaTt11AY.680.000274
ORF1ab/nsp1633S33IaGtaTt11AY.690.000187
ORF1ab/nsp1633S33IaGtaTt11AY.7.20.000559
ORF1ab/nsp1633S33GAgtGgt11AY.750.000056
ORF1ab/nsp1633S33IaGtaTt11AY.75.10.00018
ORF1ab/nsp1633S33IaGtaTt11AY.770.001127
ORF1ab/nsp1633S33SagTagC11AY.9.10.000084
ORF1ab/nsp1633S33LAGtCTt11AY.9.20.000037
ORF1ab/nsp1633S33IaGtaTt11AY.910.00073
ORF1ab/nsp1633S33RagTagA11AY.910.00073
ORF1ab/nsp1633S33IaGtaTt11AY.930.000273
ORF1ab/nsp1633S33SagTagC11AY.980.000079
ORF1ab/nsp1633S33GAgtGgt11AY.980.000079
ORF1ab/nsp1633S33RagTagA11AY.990.001049
ORF1ab/nsp1633S33IaGtaTt11AY.990.001049
ORF1ab/nsp1633S33GAgtGgt11AY.99.20.000092
ORF1ab/nsp1633S33CAgtTgt11AY.99.20.000092
ORF1ab/nsp1633S33delAGT---11B.10.000009
ORF1ab/nsp1633S33GAgtGgt11B.1.10.000018
ORF1ab/nsp1633S33RAgtCgt11B.1.1.10.000327
ORF1ab/nsp1633S33IaGtaTt11B.1.1.1570.000913
ORF1ab/nsp1633S33SagTagC11B.1.1.1610.003534
ORF1ab/nsp1633S33RagTagG11B.1.1.1610.003534
ORF1ab/nsp1633S33IaGtaTt11B.1.1.1810.004545
ORF1ab/nsp1633S33IaGtaTt11B.1.1.1890.001513
ORF1ab/nsp1633S33SagTagC11B.1.1.1920.002309
ORF1ab/nsp1633S33IaGtaTt11B.1.1.2220.000204
ORF1ab/nsp1633S33IaGtaTt11B.1.1.2430.004082
ORF1ab/nsp1633S33IaGtaTt11B.1.1.2630.001558
ORF1ab/nsp1633S33IaGtaTt11B.1.1.2770.000759
ORF1ab/nsp1633S33NaGtaAt11B.1.1.2790.001121
ORF1ab/nsp1633S33FAGtTTt11B.1.1.3060.000438
ORF1ab/nsp1633S33GAgtGgt11B.1.1.3060.000438
ORF1ab/nsp1633S33SagTagC11B.1.1.3090.005848
ORF1ab/nsp1633S33RagTagG11B.1.1.3110.000358
ORF1ab/nsp1633S33IaGtaTt11B.1.1.3180.000302
ORF1ab/nsp1633S33SagTagC11B.1.1.3480.000796
ORF1ab/nsp1633S33IaGtaTt11B.1.1.3690.000446
ORF1ab/nsp1633S33RagTagA11B.1.1.370.000193
ORF1ab/nsp1633S33IaGtaTt11B.1.1.390.00051
ORF1ab/nsp1633S33SagTagC11B.1.1.4320.001266
ORF1ab/nsp1633S33IaGtaTt11B.1.1.500.000679
ORF1ab/nsp1633S33GAgtGgt11B.1.1.5190.00004
ORF1ab/nsp1633S33NaGtaAt11B.1.1.630.000386
ORF1ab/nsp1633S33TaGtaCt11B.1.1.70.000001
ORF1ab/nsp1633S33del1Agt-gt11B.1.1.70.000001
ORF1ab/nsp1633S33IaGtaTt11B.1.1.700.000341
ORF1ab/nsp1633S33SagTagC11B.1.1120.005181
ORF1ab/nsp1633S33RagTagG11B.1.1180.006711
ORF1ab/nsp1633S33NaGtaAt11B.1.1600.000031
ORF1ab/nsp1633S33IaGtaTt11B.1.1600.000031
ORF1ab/nsp1633S33NaGtaAt11B.1.1700.00431
ORF1ab/nsp1633S33delAGT---11B.1.177.170.000821
ORF1ab/nsp1633S33IaGtaTt11B.1.177.240.001295
ORF1ab/nsp1633S33SagTagC11B.1.177.350.000691
ORF1ab/nsp1633S33SagTagC11B.1.177.40.000211
ORF1ab/nsp1633S33GAgtGgt11B.1.177.430.001477
ORF1ab/nsp1633S33IaGtaTt11B.1.177.450.000381
ORF1ab/nsp1633S33CAgtTgt11B.1.177.480.003125
ORF1ab/nsp1633S33IaGtaTt11B.1.177.50.001242
ORF1ab/nsp1633S33IaGtaTt11B.1.177.500.004695
ORF1ab/nsp1633S33delAGT---11B.1.177.730.000566
ORF1ab/nsp1633S33del2AGt--t11B.1.177.830.001481
ORF1ab/nsp1633S33SagTagC11B.1.177.830.001481
ORF1ab/nsp1633S33SagTagC11B.1.177.90.001332
ORF1ab/nsp1633S33SagTagC11B.1.1790.003759
ORF1ab/nsp1633S33delAGT---11B.1.20.000009
ORF1ab/nsp1633S33GAgtGgt11B.1.20.000009
ORF1ab/nsp1633S33GAgtGgt11B.1.2060.000816
ORF1ab/nsp1633S33RagTagA11B.1.2210.000071
ORF1ab/nsp1633S33IaGtaTt11B.1.2340.000132
ORF1ab/nsp1633S33RagTagA11B.1.2350.002519
ORF1ab/nsp1633S33IaGtaTt11B.1.2390.001221
ORF1ab/nsp1633S33IaGtaTt11B.1.2400.000216
ORF1ab/nsp1633S33delAGT---11B.1.2580.000067
ORF1ab/nsp1633S33RAgtCgt11B.1.2930.0125
ORF1ab/nsp1633S33RAgtCgt11B.1.3240.001605
ORF1ab/nsp1633S33delAGT---11B.1.3260.007576
ORF1ab/nsp1633S33SagTagC11B.1.36.220.001208
ORF1ab/nsp1633S33SagTagC11B.1.3620.001541
ORF1ab/nsp1633S33RAgtCgt11B.1.3900.010638
ORF1ab/nsp1633S33IaGtaTt11B.1.400.019608
ORF1ab/nsp1633S33IaGtaTt11B.1.416.10.001563
ORF1ab/nsp1633S33NaGtaAt11B.1.4270.00005
ORF1ab/nsp1633S33KaGTaAA11B.1.4270.00005
ORF1ab/nsp1633S33SagTagC11B.1.4270.00005
ORF1ab/nsp1633S33RagTagA11B.1.4270.00005
ORF1ab/nsp1633S33IaGtaTt11B.1.4270.00005
ORF1ab/nsp1633S33RAgtCgt11B.1.4430.004673
ORF1ab/nsp1633S33CAgtTgt11B.1.5050.004386
ORF1ab/nsp1633S33IaGtaTt11B.1.5130.013889
ORF1ab/nsp1633S33delAGT---11B.1.5250.000113
ORF1ab/nsp1633S33delAGT---11B.1.5260.000024
ORF1ab/nsp1633S33NaGtaAt11B.1.5260.000024
ORF1ab/nsp1633S33GAgtGgt11B.1.5260.000024
ORF1ab/nsp1633S33GAgtGgt11B.1.5270.003704
ORF1ab/nsp1633S33IaGtaTt11B.1.6090.000479
ORF1ab/nsp1633S33SagTagC11B.1.6090.000479
ORF1ab/nsp1633S33del1AGt-At11B.1.617.20.000004
ORF1ab/nsp1633S33VAGtGTt11B.1.617.20.000004
ORF1ab/nsp1633S33delAGT---11B.1.617.30.002985
ORF1ab/nsp1633S33delAGT---11B.1.6200.000946
ORF1ab/nsp1633S33GAgtGgt11B.1.6210.000089
ORF1ab/nsp1633S33RAgtCgt11B.1.6260.005714
ORF1ab/nsp1633S33IaGtaTt11B.1.6380.052632
ORF1ab/nsp1633S33GAgtGgt11B.30.000831
ORF1ab/nsp1633S33GAgtGgt11C.160.00106
ORF1ab/nsp1633S33IaGtaTt11C.260.007353
ORF1ab/nsp1633S33SagTagC11C.370.000116
ORF1ab/nsp1633S33IaGtaTt11C.370.000116
ORF1ab/nsp1633S33NaGtaAt11C.370.000116
ORF1ab/nsp1633S33FAGtTTt11D.20.000075
ORF1ab/nsp1633S33del2AGt--t11P.1.10.000318
ORF1ab/nsp1633S33GAgtGgt11P.1.100.000269
ORF1ab/nsp1633S33IaGtaTt11P.1.140.000048
ORF1ab/nsp1633S33GAgtGgt11P.1.150.000232
ORF1ab/nsp1633S33delAGT---11P.1.150.000232
ORF1ab/nsp1633S33IaGtaTt11P.1.170.000162
ORF1ab/nsp1633S33GAgtGgt11P.1.70.000319
ORF1ab/nsp1633S33IaGtaTt11P.70.004367
ORF1ab/nsp1633S33del2AGt--t11Q.20.000613