CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp16 | 226 | A226S | A7024S | nonsyn | Gca | Tca | 1257 | 1254 | 0.997613 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226S | A7024S | nonsyn | GcA | TcC | 1257 | 3 | 0.00238663 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226A | A7024A | syn | gcA | gcC | 964 | 811 | 0.841286 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226A | A7024A | syn | gcA | gcG | 964 | 98 | 0.10166 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226A | A7024A | syn | gcA | gcT | 964 | 55 | 0.0570539 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226V | A7024V | nonsyn | gCa | gTa | 706 | 705 | 0.998584 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226V | A7024V | nonsyn | gCA | gTG | 706 | 1 | 0.00141643 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del | A7024del | del | GCA | --- | 107 | 107 | 1 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226E | A7024E | nonsyn | gCa | gAa | 15 | 14 | 0.933333 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del1 | A7024del1 | del | gcA | gc- | 15 | 9 | 0.6 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del1 | A7024del1 | del | Gca | -ca | 15 | 3 | 0.2 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del1 | A7024del1 | del | GCA | -YK | 15 | 1 | 0.0666667 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del1 | A7024del1 | del | GCA | -NN | 15 | 1 | 0.0666667 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226del1 | A7024del1 | del | gCA | g-G | 15 | 1 | 0.0666667 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226E | A7024E | nonsyn | gCA | gAG | 15 | 1 | 0.0666667 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226T | A7024T | nonsyn | Gca | Aca | 13 | 11 | 0.846154 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226T | A7024T | nonsyn | GcA | AcG | 13 | 1 | 0.0769231 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226T | A7024T | nonsyn | GcA | AcT | 13 | 1 | 0.0769231 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226P | A7024P | nonsyn | Gca | Cca | 10 | 8 | 0.8 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226P | A7024P | nonsyn | GcA | CcT | 10 | 2 | 0.2 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226G | A7024G | nonsyn | gCa | gGa | 9 | 7 | 0.777778 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226G | A7024G | nonsyn | gCA | gGC | 9 | 2 | 0.222222 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226I | A7024I | nonsyn | GCa | ATa | 4 | 3 | 0.75 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226I | A7024I | nonsyn | GCA | ATT | 4 | 1 | 0.25 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226X | A7024X | nonsyn | GCa | TGa | 3 | 2 | 0.666667 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226L | A7024L | nonsyn | GCA | CTT | 3 | 1 | 0.333333 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226L | A7024L | nonsyn | GCa | CTa | 3 | 1 | 0.333333 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226X | A7024X | nonsyn | GCa | TAa | 3 | 1 | 0.333333 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226L | A7024L | nonsyn | GCa | TTa | 3 | 1 | 0.333333 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226D | A7024D | nonsyn | gCA | gAC | 2 | 2 | 1 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226C | A7024C | nonsyn | GCA | TGC | 2 | 2 | 1 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226K | A7024K | nonsyn | GCa | AAa | 2 | 2 | 1 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226Q | A7024Q | nonsyn | GCa | CAa | 1 | 1 | 1 | 21334-21336 |
ORF1ab/nsp16 | 226 | A226Y | A7024Y | nonsyn | GCA | TAC | 1 | 1 | 1 | 21334-21336 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1254 | 1257 | All | 0.00024 |
ORF1ab/nsp16 | 226 | A226S | GcA | TcC | 3 | 1257 | All | 0.000001 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 811 | 964 | All | 0.000155 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 98 | 964 | All | 0.000019 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 55 | 964 | All | 0.000011 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 705 | 706 | All | 0.000135 |
ORF1ab/nsp16 | 226 | A226V | gCA | gTG | 1 | 706 | All | 0 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 425 | 432 | B.1.617.2 | 0.0016 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 6 | 432 | B.1.617.2 | 0.000023 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 432 | B.1.617.2 | 0.000004 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 347 | 347 | AY.100 | 0.015964 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 302 | 302 | B.1.1.7 | 0.00027 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 300 | 300 | B.1.617.2 | 0.00113 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 192 | 192 | B.1.218 | 0.989691 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 134 | 134 | AY.43 | 0.000594 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 107 | 107 | All | 0.00002 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 82 | 82 | B.1.177.7 | 0.013518 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 55 | 55 | B.1.526 | 0.001293 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 46 | 46 | C.36 | 0.041894 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 42 | 42 | AY.27 | 0.002718 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 42 | 42 | AY.44 | 0.000256 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 42 | 42 | P.1 | 0.000662 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 38 | 38 | AY.4 | 0.000059 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 38 | 38 | B.1.1.519 | 0.001509 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 37 | 37 | AY.3 | 0.000368 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 31 | 31 | AY.103 | 0.000192 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 28 | 28 | AY.25 | 0.000168 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 27 | 27 | B.1.617.2 | 0.000102 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 25 | 25 | AY.103 | 0.000155 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 24 | 24 | AY.3 | 0.000239 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 22 | 22 | B.1.1.7 | 0.00002 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 18 | 19 | B.1 | 0.000165 |
ORF1ab/nsp16 | 226 | A226S | GcA | TcC | 1 | 19 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 15 | 17 | B.1.1.7 | 0.000013 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 17 | B.1.1.7 | 0.000002 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 14 | 15 | All | 0.000003 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 9 | 15 | All | 0.000002 |
ORF1ab/nsp16 | 226 | A226del1 | Gca | -ca | 3 | 15 | All | 0.000001 |
ORF1ab/nsp16 | 226 | A226del1 | GCA | -YK | 1 | 15 | All | 0 |
ORF1ab/nsp16 | 226 | A226del1 | GCA | -NN | 1 | 15 | All | 0 |
ORF1ab/nsp16 | 226 | A226del1 | gCA | g-G | 1 | 15 | All | 0 |
ORF1ab/nsp16 | 226 | A226E | gCA | gAG | 1 | 15 | All | 0 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 15 | 15 | AY.26 | 0.000425 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 15 | 15 | AY.39 | 0.000371 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 15 | 15 | AY.44 | 0.000091 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 13 | 14 | AY.103 | 0.000081 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 14 | AY.103 | 0.000006 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 14 | 14 | B.1.1 | 0.000254 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 14 | 14 | B.1.637 | 0.001023 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 11 | 13 | All | 0.000002 |
ORF1ab/nsp16 | 226 | A226T | GcA | AcT | 1 | 13 | All | 0 |
ORF1ab/nsp16 | 226 | A226T | GcA | AcG | 1 | 13 | All | 0 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 13 | 13 | AY.117 | 0.001099 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 13 | 13 | AY.37 | 0.004109 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 11 | 13 | AY.4 | 0.000017 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 2 | 13 | AY.4 | 0.000003 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 12 | 12 | B.1.2 | 0.000106 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 11 | 11 | B.1 | 0.000101 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 11 | 11 | B.1.429 | 0.000259 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 11 | 11 | P.1 | 0.000173 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 8 | 10 | All | 0.000002 |
ORF1ab/nsp16 | 226 | A226P | GcA | CcT | 2 | 10 | All | 0 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 10 | 10 | AY.43 | 0.000044 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 10 | 10 | AY.5 | 0.000206 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 7 | 9 | All | 0.000001 |
ORF1ab/nsp16 | 226 | A226G | gCA | gGC | 2 | 9 | All | 0 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 6 | 9 | B.1.2 | 0.000053 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 3 | 9 | B.1.2 | 0.000026 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 9 | 9 | P.1.10 | 0.002425 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 8 | 8 | AY.102 | 0.000212 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 8 | 8 | AY.25 | 0.000048 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 4 | 8 | AY.44 | 0.000024 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 2 | 8 | AY.44 | 0.000012 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 2 | 8 | AY.44 | 0.000012 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 4 | 7 | AY.25 | 0.000024 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 7 | AY.25 | 0.000012 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 7 | AY.25 | 0.000006 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 7 | 7 | AY.3.1 | 0.000597 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 7 | 7 | AY.33 | 0.000467 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 7 | 7 | AY.39 | 0.000173 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 7 | 7 | AY.47 | 0.000218 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 6 | 7 | AY.99.2 | 0.000553 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 7 | AY.99.2 | 0.000092 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 7 | 7 | B.1.1.523 | 0.010937 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 6 | 6 | AY.118 | 0.000376 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 6 | 6 | AY.39 | 0.000148 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 3 | 6 | AY.43 | 0.000013 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 2 | 6 | AY.43 | 0.000009 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 6 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 6 | 6 | B.1.1.222 | 0.001224 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 6 | 6 | B.1.427 | 0.000303 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 6 | 6 | P.1 | 0.000095 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 4 | 5 | AY.102 | 0.000106 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 5 | AY.102 | 0.000027 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 5 | 5 | AY.26 | 0.000142 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 5 | 5 | AY.5.4 | 0.001384 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 5 | 5 | B.1.1.318 | 0.001509 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 5 | 5 | C.37 | 0.00058 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 5 | 5 | P.1.17 | 0.000809 |
ORF1ab/nsp16 | 226 | A226I | GCa | ATa | 3 | 4 | All | 0.000001 |
ORF1ab/nsp16 | 226 | A226I | GCA | ATT | 1 | 4 | All | 0 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 4 | AY.98 | 0.000158 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 4 | AY.98 | 0.000079 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 4 | AY.98 | 0.000079 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 3 | 4 | B.1 | 0.000027 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp16 | 226 | A226del1 | Gca | -ca | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 2 | 4 | B.1.177 | 0.000026 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 4 | B.1.177 | 0.000026 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp16 | 226 | A226X | GCa | TGa | 2 | 3 | All | 0 |
ORF1ab/nsp16 | 226 | A226L | GCA | CTT | 1 | 3 | All | 0 |
ORF1ab/nsp16 | 226 | A226X | GCa | TAa | 1 | 3 | All | 0 |
ORF1ab/nsp16 | 226 | A226L | GCa | TTa | 1 | 3 | All | 0 |
ORF1ab/nsp16 | 226 | A226L | GCa | CTa | 1 | 3 | All | 0 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | AY.108 | 0.003308 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp16 | 226 | A226T | GcA | AcG | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226T | GcA | AcT | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | B.1.1.302 | 0.006224 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 3 | 3 | B.1.179 | 0.011278 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 3 | B.1.221 | 0.000142 |
ORF1ab/nsp16 | 226 | A226S | GcA | TcC | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 3 | B.1.351 | 0.000059 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 3 | B.1.351 | 0.00003 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | B.1.398 | 0.008929 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | B.1.621.1 | 0.001517 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp16 | 226 | A226K | GCa | AAa | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | A.2.4 | 0.006734 |
ORF1ab/nsp16 | 226 | A226K | GCa | AAa | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 226 | A226C | GCA | TGC | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 226 | A226D | gCA | gAC | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 2 | AY.30 | 0.000396 |
ORF1ab/nsp16 | 226 | A226V | gCA | gTG | 1 | 2 | AY.30 | 0.000396 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp16 | 226 | A226I | GCA | ATT | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226L | GCA | CTT | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226L | GCa | CTa | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226P | GcA | CcT | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226I | GCa | ATa | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | AZ.3 | 0.00304 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226P | GcA | CcT | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226G | gCA | gGC | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 2 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226S | GcA | TcC | 1 | 2 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226del1 | Gca | -ca | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 226 | A226del1 | GCA | -NN | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226G | gCA | gGC | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 2 | 2 | B.1.235 | 0.005038 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | B.1.602 | 0.013072 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | B.1.631 | 0.006734 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | A | 0.000387 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AB.1 | 0.008197 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp16 | 226 | A226Y | GCA | TAC | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 226 | A226Q | GCa | CAa | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp16 | 226 | A226I | GCa | ATa | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp16 | 226 | A226E | gCA | gAG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp16 | 226 | A226del1 | GCA | -YK | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp16 | 226 | A226L | GCa | TTa | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226X | GCa | TGa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226C | GCA | TGC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 226 | A226D | gCA | gAC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp16 | 226 | A226del1 | gCA | g-G | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226D | gCA | gAC | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226Y | GCA | TAC | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226X | GCa | TAa | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp16 | 226 | A226I | GCa | ATa | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 226 | A226del1 | gcA | gc- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp16 | 226 | A226Q | GCa | CAa | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226X | GCa | TGa | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226C | GCA | TGC | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | B.1.264.1 | 0.047619 |
ORF1ab/nsp16 | 226 | A226del1 | Gca | -ca | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp16 | 226 | A226G | gCa | gGa | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp16 | 226 | A226E | gCa | gAa | 1 | 1 | B.1.505 | 0.004386 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp16 | 226 | A226P | Gca | Cca | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp16 | 226 | A226T | Gca | Aca | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | B.58 | 0.010204 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | C.2.1 | 0.006667 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcG | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp16 | 226 | A226del | GCA | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp16 | 226 | A226A | gcA | gcC | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp16 | 226 | A226V | gCa | gTa | 1 | 1 | Q.5 | 0.016949 |
ORF1ab/nsp16 | 226 | A226S | Gca | Tca | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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