CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp16 | 216 | R216C | R7014C | nonsyn | Cgc | Tgc | 115820 | 115537 | 0.997557 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216C | R7014C | nonsyn | CgC | TgT | 115820 | 283 | 0.00244345 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216R | R7014R | syn | cgC | cgT | 29807 | 29758 | 0.998356 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216R | R7014R | syn | cgC | cgA | 29807 | 42 | 0.00140906 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216R | R7014R | syn | cgC | cgG | 29807 | 7 | 0.000234844 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216N | R7014N | nonsyn | CGc | AAc | 22096 | 22091 | 0.999774 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216N | R7014N | nonsyn | CGC | AAT | 22096 | 5 | 0.000226285 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216S | R7014S | nonsyn | Cgc | Agc | 5514 | 5500 | 0.997461 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216S | R7014S | nonsyn | CgC | AgT | 5514 | 14 | 0.00253899 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216H | R7014H | nonsyn | cGc | cAc | 3165 | 3127 | 0.987994 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216H | R7014H | nonsyn | cGC | cAT | 3165 | 38 | 0.0120063 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216L | R7014L | nonsyn | cGc | cTc | 150 | 150 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216del | R7014del | del | CGC | --- | 127 | 127 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216G | R7014G | nonsyn | Cgc | Ggc | 38 | 38 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216F | R7014F | nonsyn | CGc | TTc | 36 | 36 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216Y | R7014Y | nonsyn | CGc | TAc | 31 | 31 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216P | R7014P | nonsyn | cGc | cCc | 11 | 10 | 0.909091 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216P | R7014P | nonsyn | cGC | cCG | 11 | 1 | 0.0909091 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216X | R7014X | nonsyn | CgC | TgA | 4 | 2 | 0.5 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216X | R7014X | nonsyn | CGC | TAA | 4 | 2 | 0.5 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216del1 | R7014del1 | del | cGc | c-c | 3 | 2 | 0.666667 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216del1 | R7014del1 | del | CgC | Tg- | 3 | 1 | 0.333333 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216Q | R7014Q | nonsyn | cGC | cAA | 2 | 2 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216T | R7014T | nonsyn | CGc | ACc | 2 | 2 | 1 | 21304-21306 |
ORF1ab/nsp16 | 216 | R216del2 | R7014del2 | del | cGC | c-- | 1 | 1 | 1 | 21304-21306 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 115537 | 115820 | All | 0.022098 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 283 | 115820 | All | 0.000054 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 99286 | 99528 | B.1.2 | 0.87425 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 242 | 99528 | B.1.2 | 0.002131 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 29758 | 29807 | All | 0.005692 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 42 | 29807 | All | 0.000008 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 7 | 29807 | All | 0.000001 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 23053 | 23053 | B.1.1.519 | 0.915455 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 22091 | 22096 | All | 0.004225 |
ORF1ab/nsp16 | 216 | R216N | CGC | AAT | 5 | 22096 | All | 0.000001 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8023 | 8030 | B.1.596 | 0.699111 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 7 | 8030 | B.1.596 | 0.00061 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5500 | 5514 | All | 0.001052 |
ORF1ab/nsp16 | 216 | R216S | CgC | AgT | 14 | 5514 | All | 0.000003 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5458 | 5459 | B.1.1.7 | 0.004886 |
ORF1ab/nsp16 | 216 | R216N | CGC | AAT | 1 | 5459 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3182 | 3182 | AY.4.2 | 0.069013 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3127 | 3165 | All | 0.000598 |
ORF1ab/nsp16 | 216 | R216H | cGC | cAT | 38 | 3165 | All | 0.000007 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2223 | 2224 | AY.4 | 0.00346 |
ORF1ab/nsp16 | 216 | R216N | CGC | AAT | 1 | 2224 | AY.4 | 0.000002 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2015 | 2038 | B.1 | 0.018456 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 23 | 2038 | B.1 | 0.000211 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1680 | 1680 | AY.32 | 0.894569 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1546 | 1548 | B.1.2 | 0.013613 |
ORF1ab/nsp16 | 216 | R216N | CGC | AAT | 2 | 1548 | B.1.2 | 0.000018 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1517 | 1517 | AY.3.1 | 0.129338 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1379 | 1379 | B.1.1.7 | 0.001235 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1296 | 1296 | R.1 | 0.116652 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1169 | 1173 | B.1.1.7 | 0.001047 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 3 | 1173 | B.1.1.7 | 0.000003 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 1173 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1133 | 1133 | AY.4 | 0.001763 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 736 | 736 | B.1.617.2 | 0.002771 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 712 | 712 | B.1.617.2 | 0.002681 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 653 | 653 | AY.103 | 0.004055 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 605 | 640 | AY.4 | 0.000942 |
ORF1ab/nsp16 | 216 | R216H | cGC | cAT | 35 | 640 | AY.4 | 0.000054 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 596 | 596 | AY.4 | 0.000928 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 523 | 523 | B.1.177.80 | 1 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 502 | 502 | AY.23 | 0.035014 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 424 | 424 | B.1.617.2 | 0.001597 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 387 | 387 | AY.3 | 0.003849 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 377 | 377 | AY.102 | 0.009996 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 357 | 357 | B.1.1.7 | 0.00032 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 348 | 348 | B.1.526 | 0.00818 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 334 | 334 | AY.44 | 0.002033 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 324 | 324 | AY.103 | 0.002012 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 320 | 320 | B.1.1 | 0.005805 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 304 | 306 | AY.4 | 0.000473 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 2 | 306 | AY.4 | 0.000003 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 301 | 301 | AY.25 | 0.00181 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 297 | 297 | P.6 | 0.933962 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 270 | 270 | AY.25 | 0.001624 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 268 | 268 | B.1.351.2 | 0.081089 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 267 | 267 | B.1.1.7 | 0.000239 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 266 | 266 | B.1.1.44 | 0.640964 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 257 | 257 | B.1.243 | 0.017883 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 245 | 245 | B.1.567 | 0.816667 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 238 | 238 | B.1 | 0.00218 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 215 | 222 | B.1.617.2 | 0.00081 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 7 | 222 | B.1.617.2 | 0.000026 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 209 | 209 | AY.105 | 0.134405 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 207 | 207 | AY.43 | 0.000917 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 206 | 206 | AY.39 | 0.005091 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 204 | 204 | AY.46 | 0.021232 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 201 | 202 | AY.43 | 0.000891 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 202 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 196 | 197 | B.1.1 | 0.003556 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 1 | 197 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 179 | 180 | B.1.617.2 | 0.000674 |
ORF1ab/nsp16 | 216 | R216H | cGC | cAT | 1 | 180 | B.1.617.2 | 0.000004 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 174 | 174 | AY.89 | 0.852941 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 163 | 163 | B.1.637 | 0.011911 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 159 | 159 | AY.103 | 0.000987 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 155 | 155 | B.1.1.214 | 0.008596 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 153 | 153 | B.1.429 | 0.0036 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 150 | 150 | All | 0.000029 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 150 | 150 | AY.25 | 0.000902 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 146 | 146 | AY.43 | 0.000647 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 142 | 142 | B.1.177 | 0.00187 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 127 | 127 | All | 0.000024 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 126 | 126 | AY.4.2 | 0.002733 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 118 | 118 | AY.47 | 0.00367 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 113 | 113 | B.1.177 | 0.001488 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 111 | 111 | B.1.221 | 0.007885 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 108 | 108 | AY.5 | 0.00223 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 103 | 103 | AY.44 | 0.000627 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 102 | 102 | B.1.595 | 0.026618 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 89 | 93 | AY.103 | 0.000553 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 4 | 93 | AY.103 | 0.000025 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 91 | 91 | AY.45 | 0.011073 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 90 | 90 | AY.98.1 | 0.004359 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 90 | 90 | B.1.1 | 0.001633 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 89 | 89 | AY.26 | 0.00252 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 89 | 89 | B.1 | 0.000815 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 89 | 89 | R.1 | 0.008011 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 88 | 88 | B.1.2 | 0.000775 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 86 | 86 | AY.25 | 0.000517 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 85 | 85 | B.1.596 | 0.007407 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 83 | 85 | P.1 | 0.001308 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 85 | P.1 | 0.000016 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 85 | P.1 | 0.000016 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 82 | 82 | AY.97 | 0.139456 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 81 | 81 | AY.5 | 0.001673 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 79 | 79 | AY.47 | 0.002457 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 77 | 77 | B.1 | 0.000705 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 76 | 76 | AY.3 | 0.000756 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 76 | 76 | Q.8 | 0.012533 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 73 | 74 | AY.44 | 0.000444 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 74 | AY.44 | 0.000006 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 71 | 71 | AY.3 | 0.000706 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 70 | 70 | R.1 | 0.006301 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 69 | 69 | AY.29 | 0.001088 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 69 | 69 | AY.6 | 0.002838 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 68 | 68 | AY.3.1 | 0.005798 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 66 | 66 | AY.20 | 0.002565 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 66 | 66 | AY.20 | 0.002565 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 65 | 65 | AY.39.1 | 0.002575 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 64 | 64 | AY.42 | 0.002575 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 64 | 64 | AY.5 | 0.001322 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 62 | 64 | C.37 | 0.007196 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 2 | 64 | C.37 | 0.000232 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 63 | 63 | AY.39 | 0.001557 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 63 | 63 | B.1.234 | 0.008312 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 61 | 61 | AY.43 | 0.00027 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 60 | 60 | AY.29.1 | 0.01323 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 59 | 59 | AY.103 | 0.000366 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 59 | 59 | B.1.429 | 0.001388 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 57 | 57 | AY.111 | 0.01044 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 56 | 56 | AY.39 | 0.001384 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 56 | 56 | AY.4.2 | 0.001215 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 56 | 56 | B.1.36.26 | 0.16 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 54 | 54 | AY.44 | 0.000329 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 54 | 54 | B.1.1 | 0.00098 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 54 | 54 | B.1.621 | 0.00478 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 53 | 53 | AY.84 | 0.023185 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 52 | 52 | AY.3 | 0.000517 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 50 | 50 | B.1.351 | 0.001486 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 49 | 49 | B.1.177.86 | 0.008989 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 48 | 48 | AY.20 | 0.001866 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 47 | 47 | AY.16 | 0.017844 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 47 | 47 | AY.5.3 | 0.015857 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 47 | 47 | B.1 | 0.00043 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 46 | 47 | B.1.429 | 0.001082 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 47 | B.1.429 | 0.000024 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 47 | 47 | P.1 | 0.00074 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 46 | 46 | AY.110 | 0.005184 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 46 | 46 | AY.33 | 0.003072 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 46 | 46 | P.1 | 0.000725 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 45 | 45 | AY.29 | 0.00071 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 45 | 45 | AY.44 | 0.000274 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 45 | 45 | B.1.429 | 0.001059 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 45 | 45 | B.1.578 | 0.803571 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 45 | 45 | P.1.16 | 0.016835 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 43 | 44 | AY.119 | 0.001518 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 44 | AY.119 | 0.000035 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 44 | 44 | B.1.427 | 0.002222 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 44 | 44 | B.1.621 | 0.003895 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 43 | 43 | B.1.177 | 0.000566 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 42 | 42 | AY.117 | 0.00355 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 42 | 42 | B.1.177.16 | 0.027907 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 41 | 41 | AY.100 | 0.001886 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 41 | 41 | B.1.526 | 0.000964 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 40 | 40 | B.1.1.432 | 0.050633 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 40 | 40 | B.1.234 | 0.005278 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 39 | 39 | B.1.177.73 | 0.022084 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 39 | 39 | B.1.258.17 | 0.004055 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 38 | 38 | All | 0.000007 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 38 | 38 | AY.47 | 0.001182 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 37 | 37 | AY.46.3 | 0.034547 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 37 | 37 | B.1.509 | 0.032035 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 37 | 37 | B.1.587 | 0.070209 |
ORF1ab/nsp16 | 216 | R216F | CGc | TTc | 36 | 36 | All | 0.000007 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 36 | 36 | B.1.351 | 0.00107 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 35 | 35 | AY.110 | 0.003944 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 35 | 35 | AY.110 | 0.003944 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 35 | 35 | AY.3 | 0.000348 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 35 | 35 | AY.91 | 0.025566 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 35 | 35 | B.1.177 | 0.000461 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 35 | 35 | K.1 | 0.833333 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 34 | 34 | AY.118 | 0.00213 |
ORF1ab/nsp16 | 216 | R216F | CGc | TTc | 34 | 34 | B.1.2 | 0.000299 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 33 | 33 | AY.29 | 0.000521 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 33 | 33 | AY.6 | 0.001357 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 33 | 33 | B.1.1.161 | 0.116608 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 33 | 33 | B.1.1.306 | 0.014467 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 32 | 32 | AY.101 | 0.015694 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 31 | 31 | All | 0.000006 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 31 | 31 | AY.102 | 0.000822 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 31 | 31 | AY.20 | 0.001205 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 30 | 30 | AY.118 | 0.001879 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 30 | 30 | B.1.1.176 | 0.013181 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 30 | 30 | B.1.258 | 0.001996 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 29 | 29 | AY.46.6 | 0.002094 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 29 | 29 | AY.99.2 | 0.002673 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 28 | 28 | AY.51 | 0.025455 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 27 | 28 | B.1.160 | 0.000842 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 28 | B.1.160 | 0.000031 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 26 | 27 | A.2.5 | 0.012974 |
ORF1ab/nsp16 | 216 | R216N | CGC | AAT | 1 | 27 | A.2.5 | 0.000499 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 27 | 27 | AY.86 | 0.022407 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 27 | 27 | B.1.258 | 0.001797 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 27 | 27 | B.1.36.9 | 0.086817 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 25 | 25 | P.1.14 | 0.001195 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 24 | 24 | AY.100 | 0.001104 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 15 | 24 | B.1.1.519 | 0.000596 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 9 | 24 | B.1.1.519 | 0.000357 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 23 | 23 | AY.3.1 | 0.001961 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 23 | 23 | AY.39.1 | 0.000911 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 23 | 23 | AY.5 | 0.000475 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 23 | 23 | B.1.131 | 0.201754 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 23 | 23 | B.1.93 | 0.021475 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 22 | 22 | B.1.243 | 0.001531 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 22 | 22 | B.1.258.17 | 0.002287 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 22 | 22 | B.1.575 | 0.006675 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 22 | 22 | B.1.580 | 0.089431 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 21 | 21 | AY.25 | 0.000126 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 20 | 21 | AY.39 | 0.000494 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 21 | AY.39 | 0.000025 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 21 | 21 | AY.98.1 | 0.001017 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 21 | 21 | B.1.1.322 | 0.184211 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 20 | 20 | AY.46 | 0.002082 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 20 | 20 | AY.46.6 | 0.001444 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 20 | 20 | AY.9.2 | 0.000735 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 20 | 20 | AY.98 | 0.00158 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 20 | 20 | B.1.232 | 0.010747 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 20 | 20 | B.1.427 | 0.00101 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 12 | 19 | AY.100 | 0.000552 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 7 | 19 | AY.100 | 0.000322 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 19 | 19 | AY.120 | 0.000706 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 19 | 19 | AY.26 | 0.000538 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 19 | 19 | AY.36 | 0.002816 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 19 | 19 | B.1.1.222 | 0.003876 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 19 | 19 | B.1.1.335 | 0.246753 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 19 | 19 | B.1.2 | 0.000167 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 19 | 19 | B.1.526 | 0.000447 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 19 | 19 | P.2 | 0.003546 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 18 | 18 | AY.89 | 0.088235 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 18 | 18 | AY.99.2 | 0.001659 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 18 | 18 | B.1.1.28 | 0.005602 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 18 | 18 | B.1.36.18 | 0.007563 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 17 | 17 | AY.4.2 | 0.000369 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 17 | 17 | AY.43 | 0.000075 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 17 | 17 | P.1 | 0.000268 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 17 | 17 | Q.1 | 0.002148 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 16 | 16 | AY.116 | 0.004588 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 16 | 16 | AY.99.2 | 0.001475 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 16 | 16 | AY.99.2 | 0.001475 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 16 | 16 | B.1.2 | 0.000141 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 16 | 16 | B.1.409 | 0.0125 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 16 | 16 | B.1.427 | 0.000808 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 15 | 15 | AY.29 | 0.000237 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 15 | 15 | AY.4.5 | 0.001612 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 15 | 15 | B | 0.001917 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 15 | 15 | B.1.1.63 | 0.005787 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 15 | 15 | B.1.149 | 0.05137 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 15 | 15 | B.1.160 | 0.000468 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 14 | 15 | B.1.2 | 0.000123 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 15 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 15 | 15 | B.1.422 | 0.012185 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 15 | 15 | B.1.609 | 0.007191 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 14 | 14 | AY.121 | 0.001894 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 14 | 14 | AY.20 | 0.000544 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 14 | 14 | AY.33 | 0.000935 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 14 | 14 | AY.42 | 0.000563 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 14 | 14 | AY.45 | 0.001704 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 14 | 14 | AY.69 | 0.002613 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 14 | 14 | B.1.1 | 0.000254 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 14 | 14 | B.1.177.86 | 0.002568 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 14 | 14 | B.1.369 | 0.003993 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 14 | 14 | B.1.429 | 0.000329 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 14 | 14 | B.1.525 | 0.001584 |
ORF1ab/nsp16 | 216 | R216S | CgC | AgT | 12 | 14 | B.6 | 0.010919 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 14 | B.6 | 0.00182 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | AY.116.1 | 0.004049 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | AY.119 | 0.000459 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 13 | 13 | AY.120 | 0.000483 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 13 | 13 | AY.29 | 0.000205 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 13 | 13 | AY.4 | 0.00002 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 13 | 13 | AY.98 | 0.001027 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 13 | 13 | B.1.1.222 | 0.002652 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 13 | 13 | B.1.1.317 | 0.005352 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | B.1.1.318 | 0.003923 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 13 | 13 | B.1.1.326 | 0.022887 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | B.1.1.486 | 0.020505 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | B.1.160 | 0.000405 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 13 | 13 | B.1.177 | 0.000171 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 13 | 13 | B.1.311 | 0.003569 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 13 | 13 | B.1.311 | 0.003569 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 13 | 13 | B.1.396 | 0.009174 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 13 | 13 | B.1.438.1 | 0.001394 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 13 | 13 | B.1.596 | 0.001133 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 13 | 13 | P.1.13 | 0.01168 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 13 | 13 | P.1.15 | 0.00302 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 12 | 12 | AY.113 | 0.001709 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 12 | 12 | AY.119 | 0.000424 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 12 | 12 | AY.61 | 0.001257 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 12 | 12 | B.1.1.434 | 0.004183 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 12 | 12 | B.1.12 | 0.096 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 12 | 12 | B.1.214.3 | 0.085714 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 12 | 12 | B.1.36 | 0.001751 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 12 | 12 | B.1.582 | 0.005888 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 12 | 12 | P.1 | 0.000189 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 12 | 12 | Q.7 | 0.013333 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 10 | 11 | All | 0.000002 |
ORF1ab/nsp16 | 216 | R216P | cGC | cCG | 1 | 11 | All | 0 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 11 | 11 | AY.120 | 0.000409 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | AY.33 | 0.000735 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 11 | 11 | AY.4.2 | 0.000239 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 11 | 11 | AY.43 | 0.000049 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 11 | 11 | AY.75 | 0.000616 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 11 | 11 | B.1 | 0.000101 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | B.1.1.304 | 0.030899 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 11 | 11 | B.1.36.26 | 0.031429 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 11 | 11 | B.1.564 | 0.004685 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 11 | 11 | B.1.576 | 0.009973 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | B.1.621 | 0.000974 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 11 | 11 | C.36 | 0.010018 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 11 | 11 | P.1.12 | 0.005324 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 11 | 11 | P.1.14 | 0.000526 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | A.21 | 0.027701 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | AY.111 | 0.001832 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 10 | 10 | AY.116.1 | 0.003114 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 10 | 10 | AY.4.5 | 0.001075 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 10 | 10 | AY.47 | 0.000311 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 10 | 10 | AY.55 | 0.009174 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | AY.75 | 0.00056 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 10 | 10 | AY.98.1 | 0.000484 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | B.1.1.33 | 0.004209 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 10 | 10 | B.1.1.7 | 0.000009 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | B.1.177.24 | 0.012953 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 10 | 10 | B.1.206 | 0.008157 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 9 | 10 | B.1.258 | 0.000599 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 10 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 10 | 10 | B.1.258.3 | 0.01675 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 10 | 10 | B.1.351.5 | 0.005995 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 10 | 10 | B.1.409 | 0.007812 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 10 | 10 | B.1.409 | 0.007812 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 10 | 10 | B.1.565 | 0.008104 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 10 | 10 | C.36.3 | 0.005672 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | AE.8 | 0.004401 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 9 | 9 | AY.104 | 0.017857 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | AY.26 | 0.000255 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | AY.27 | 0.000582 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | AY.46.6 | 0.00065 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | AY.98.1 | 0.000436 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 9 | 9 | B.1.1.214 | 0.000499 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.1.275 | 0.101124 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 9 | 9 | B.1.1.28 | 0.002801 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 9 | 9 | B.1.1.284 | 0.000967 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 9 | 9 | B.1.1.412 | 0.068702 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 9 | 9 | B.1.177 | 0.000119 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 9 | 9 | B.1.311 | 0.002471 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.311 | 0.002471 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.36 | 0.001313 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | B.1.408 | 0.03321 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 9 | 9 | B.1.471 | 0.02459 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.561 | 0.003573 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.567 | 0.03 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | B.1.595 | 0.002349 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.612 | 0.023873 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 9 | 9 | B.1.621 | 0.000797 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 9 | 9 | C.8 | 0.040179 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 8 | 8 | AY.33 | 0.000534 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8 | 8 | AY.34 | 0.000776 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | AY.36 | 0.001186 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 8 | 8 | AY.6 | 0.000329 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 8 | 8 | AY.74 | 0.000925 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 8 | 8 | AY.75 | 0.000448 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | AY.9.1 | 0.00067 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 8 | 8 | AY.91 | 0.005844 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 7 | 8 | B.1.1.220 | 0.013011 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 8 | B.1.1.220 | 0.001859 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | B.1.1.317 | 0.003294 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 8 | 8 | B.1.1.39 | 0.004077 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 8 | 8 | B.1.1.417 | 0.021622 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | B.1.36 | 0.001167 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | B.1.369 | 0.002282 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | B.1.416.1 | 0.0125 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 8 | 8 | B.1.525 | 0.000905 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 8 | 8 | B.1.575.1 | 0.019512 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | AY.102 | 0.000186 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 7 | 7 | AY.114 | 0.001618 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 7 | 7 | AY.121 | 0.000947 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 7 | 7 | AY.20 | 0.000272 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 7 | 7 | AY.46.6 | 0.000505 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 7 | AY.5 | 0.000124 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 7 | AY.5 | 0.000021 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 7 | 7 | AY.54 | 0.000667 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | AY.85 | 0.00299 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 7 | 7 | B.1.1.326 | 0.012324 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 7 | 7 | B.1.1.50 | 0.004752 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 7 | 7 | B.1.1.523 | 0.010937 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | B.1.177.57 | 0.001967 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | B.1.177.7 | 0.001154 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | B.1.466.2 | 0.002739 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 7 | 7 | B.1.525 | 0.000792 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 7 | 7 | B.1.577 | 0.004811 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | B.1.577 | 0.004811 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 7 | 7 | B.1.609 | 0.003356 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 7 | 7 | P.1 | 0.00011 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | P.2 | 0.001306 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 7 | 7 | Q.2 | 0.004294 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | A.2 | 0.003971 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.106 | 0.002009 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.46.5 | 0.00119 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.5.3 | 0.002024 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.5.4 | 0.00166 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.59 | 0.003178 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | AY.6 | 0.000247 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.75 | 0.000336 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.92 | 0.001724 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | AY.93 | 0.001638 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | AY.95 | 0.004566 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 6 | 6 | AZ.2 | 0.004926 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 6 | 6 | B.1.1.284 | 0.000644 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | B.1.1.301 | 0.007075 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | B.1.1.485 | 0.1 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.1.507 | 0.052174 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | B.1.160 | 0.000187 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | B.1.177.81 | 0.001136 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 6 | 6 | B.1.2 | 0.000053 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | B.1.201 | 0.034091 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | B.1.232 | 0.003224 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.239 | 0.007326 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.240 | 0.001293 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 6 | B.1.258 | 0.000333 |
ORF1ab/nsp16 | 216 | R216H | cGC | cAT | 1 | 6 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.284 | 0.078947 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.349 | 0.004289 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | B.1.36.18 | 0.002521 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | B.1.621.1 | 0.003035 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 6 | 6 | B.1.637 | 0.000438 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | C.37 | 0.000696 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | P.1.17 | 0.000971 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 6 | 6 | Q.1 | 0.000758 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 6 | 6 | Q.3 | 0.00087 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 6 | 6 | R.1 | 0.00054 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | A.2.5 | 0.002495 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.113 | 0.000712 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.116.1 | 0.001557 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | AY.13 | 0.000805 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.13 | 0.000805 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | AY.28 | 0.009452 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | AY.30 | 0.001979 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.34.1 | 0.00255 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | AY.36 | 0.000741 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.4.5 | 0.000537 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | AY.46.2 | 0.003177 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 5 | 5 | AY.46.5 | 0.000992 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | AY.54 | 0.000477 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.61 | 0.000524 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | AY.79 | 0.006053 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | AY.8 | 0.00303 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | AY.9.2 | 0.000184 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 5 | B.1.1.1 | 0.001307 |
ORF1ab/nsp16 | 216 | R216S | CgC | AgT | 1 | 5 | B.1.1.1 | 0.000327 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | B.1.1.174 | 0.016892 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | B.1.1.189 | 0.007564 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | B.1.1.322 | 0.04386 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.1.329 | 0.019231 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.177.21 | 0.000382 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.177.28 | 0.037037 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | B.1.206 | 0.004078 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | B.1.346 | 0.006553 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | B.1.351 | 0.000149 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | B.1.351.5 | 0.002998 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.36.29 | 0.002587 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 5 | 5 | B.1.361 | 0.006443 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.530 | 0.035714 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | B.1.568 | 0.005556 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 5 | 5 | B.1.587 | 0.009488 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | B.1.639 | 0.108696 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 5 | B.6 | 0.00364 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 5 | B.6 | 0.00091 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 5 | 5 | C.17 | 0.277778 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 5 | 5 | D.2 | 0.000375 |
ORF1ab/nsp16 | 216 | R216X | CGC | TAA | 2 | 4 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216X | CgC | TgA | 2 | 4 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216X | CGC | TAA | 2 | 4 | All | 0 |
ORF1ab/nsp16 | 216 | R216X | CgC | TgA | 2 | 4 | All | 0 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | AU.2 | 0.009685 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | AY.109 | 0.002959 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | AY.113 | 0.00057 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | AY.114 | 0.000924 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.119 | 0.000141 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.120.1 | 0.001284 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 4 | AY.38 | 0.000999 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 2 | 4 | AY.38 | 0.000999 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | AY.4.4 | 0.001637 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.41 | 0.001176 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | AY.46 | 0.000416 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | AY.46.2 | 0.002541 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.56 | 0.006421 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.72 | 0.005442 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.79 | 0.004843 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | AY.95 | 0.003044 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | AY.97 | 0.006803 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 4 | 4 | AY.99 | 0.004197 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | AZ.2 | 0.003284 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.1.288 | 0.007663 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.1.434 | 0.001394 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.1.526 | 0.014184 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | B.1.111 | 0.0047 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.177.53 | 0.009569 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 4 | 4 | B.1.177.57 | 0.001124 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.177.74 | 0.060606 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.243 | 0.000278 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | B.1.324 | 0.006421 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.346 | 0.005242 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.349 | 0.002859 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.381 | 0.03125 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.391 | 0.00451 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 4 | 4 | B.1.428 | 0.004082 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.551 | 0.005161 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | B.1.561 | 0.001588 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.564 | 0.001704 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.575.1 | 0.009756 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 4 | 4 | B.1.590 | 0.018182 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | B.1.623 | 0.002146 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | C.35 | 0.003096 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | C.38 | 0.032258 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 4 | 4 | P.6 | 0.012579 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | 0.166667 | |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | A.1 | 0.000846 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | A.2.5.1 | 0.014423 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | A.23.1 | 0.002113 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AD.2 | 0.000657 |
ORF1ab/nsp16 | 216 | R216del1 | cGc | c-c | 2 | 3 | All | 0 |
ORF1ab/nsp16 | 216 | R216del1 | CgC | Tg- | 1 | 3 | All | 0 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.105 | 0.001929 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | AY.120 | 0.000112 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.35 | 0.000699 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.35 | 0.000699 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | AY.46.1 | 0.00308 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.62 | 0.001307 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AY.76 | 0.014493 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.83 | 0.005172 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | AY.86 | 0.00249 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | AY.88 | 0.002653 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | AZ.4 | 0.010067 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 3 | B.1.1.161 | 0.007067 |
ORF1ab/nsp16 | 216 | R216C | CgC | TgT | 1 | 3 | B.1.1.161 | 0.003534 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.1.171 | 0.011029 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | B.1.1.241 | 0.006211 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | B.1.1.251 | 0.02381 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.1.301 | 0.003538 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.1.397 | 0.006757 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.1.434 | 0.001046 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.1.487 | 0.01676 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.111 | 0.003525 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.177.35 | 0.002073 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.177.79 | 0.007026 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.210 | 0.006397 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.221.1 | 0.008721 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.306 | 0.017143 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.336 | 0.007317 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.36.38 | 0.004926 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.400 | 0.001287 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.404 | 0.003906 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.497 | 0.000944 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.541 | 0.013274 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.569 | 0.043478 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | B.1.581 | 0.028302 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 3 | 3 | B.1.619 | 0.002613 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | B.1.623 | 0.001609 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 3 | 3 | Q.2 | 0.00184 |
ORF1ab/nsp16 | 216 | R216Q | cGC | cAA | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | A.2.3 | 0.009479 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | A.21 | 0.00554 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp16 | 216 | R216Q | cGC | cAA | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 216 | R216T | CGc | ACc | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.46.3 | 0.001867 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.63 | 0.000774 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 2 | AY.9.1 | 0.000084 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 2 | AY.9.1 | 0.000084 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.96 | 0.004149 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B | 0.000256 |
ORF1ab/nsp16 | 216 | R216F | CGc | TTc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.135 | 0.00939 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.1.141 | 0.004024 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 2 | 2 | B.1.1.192 | 0.004619 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.198 | 0.002937 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.1.210 | 0.011429 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 2 | B.1.1.220 | 0.001859 |
ORF1ab/nsp16 | 216 | R216P | cGC | cCG | 1 | 2 | B.1.1.220 | 0.001859 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.228 | 0.006098 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.236 | 0.013793 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.1.258 | 0.006515 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.269 | 0.002706 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.277 | 0.001517 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.297 | 0.004474 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.305 | 0.007722 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.329 | 0.007692 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.335 | 0.025974 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.1.354 | 0.008772 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.410 | 0.074074 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.1.420 | 0.002012 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.442 | 0.037037 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.507 | 0.017391 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.111 | 0.00235 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.12 | 0.016 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.126 | 0.002551 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.177.10 | 0.001756 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.177.11 | 0.003396 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 2 | B.1.177.12 | 0.000152 |
ORF1ab/nsp16 | 216 | R216S | CgC | AgT | 1 | 2 | B.1.177.12 | 0.000152 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.43 | 0.002954 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.177.75 | 0.002081 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.177.8 | 0.001505 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.177.83 | 0.002963 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp16 | 216 | R216del1 | cGc | c-c | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 216 | R216del1 | CgC | Tg- | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.221.3 | 0.001667 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.258.24 | 0.021505 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.258.3 | 0.00335 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.289 | 0.005319 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.305 | 0.004301 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.336 | 0.004878 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.337 | 0.011173 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.36.36 | 0.001204 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.36.8 | 0.002 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.361 | 0.002577 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.370 | 0.016 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.378 | 0.013699 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.395 | 0.014085 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.399 | 0.003868 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.516 | 0.003914 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.525 | 0.000226 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.546 | 0.007407 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.550 | 0.027397 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 2 | 2 | B.1.567 | 0.006667 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.587 | 0.003795 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.589 | 0.015152 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.602 | 0.013072 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.616 | 0.04878 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | B.1.617.1 | 0.000258 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | B.1.631 | 0.006734 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | B.1.70 | 0.04878 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | B.1.78 | 0.017094 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | B.46 | 0.041667 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | C.2 | 0.032258 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | D.5 | 0.00995 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | P.1.6 | 0.003891 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 2 | 2 | P.1.8 | 0.009569 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | A.28 | 0.002646 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AA.8 | 0.022222 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp16 | 216 | R216del2 | cGC | c-- | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AV.1 | 0.005051 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp16 | 216 | R216T | CGc | ACc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.5.1 | 0.003759 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 216 | R216del1 | cGc | c-c | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.111 | 0.014706 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.158 | 0.012195 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.160 | 0.02381 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.175 | 0.076923 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.186 | 0.003436 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.230 | 0.009174 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.243 | 0.004082 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.261 | 0.008621 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.334 | 0.016393 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.343 | 0.020833 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.355 | 0.015385 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.384 | 0.02381 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.387 | 0.058824 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.407 | 0.041667 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.421 | 0.030303 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgG | 1 | 1 | B.1.1.422 | 0.045455 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.424 | 0.045455 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.429 | 0.004608 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.462 | 0.008621 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.5 | 0.008333 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.1.514 | 0.038462 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.518 | 0.006329 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp16 | 216 | R216H | cGC | cAT | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp16 | 216 | R216del2 | cGC | c-- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.1.74 | 0.00431 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.1.74 | 0.00431 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.74 | 0.00431 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.1.95 | 0.019608 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.103 | 0.019231 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.106 | 0.03125 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.160.8 | 0.001289 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.160.9 | 0.007194 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.177.31 | 0.011494 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.48 | 0.003125 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.177.59 | 0.016129 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 216 | R216T | CGc | ACc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.247 | 0.014925 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.248 | 0.029412 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.258.21 | 0.007752 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.258.6 | 0.019608 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.258.9 | 0.005 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 1 | B.1.284 | 0.013158 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.308 | 0.034483 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.310 | 0.047619 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.330 | 0.028571 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.35 | 0.008475 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.380 | 0.006623 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.403 | 0.003268 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.423 | 0.010204 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.424 | 0.008065 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.437 | 0.020833 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.473 | 0.019231 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.474 | 0.001901 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.476 | 0.1 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.499.1 | 0.111111 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.537 | 0.02 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.539 | 0.017544 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.543 | 0.01 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.547 | 0.02439 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.556 | 0.007519 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.575.1 | 0.002439 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.592 | 0.04 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.593 | 0.01087 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.595.2 | 0.04 |
ORF1ab/nsp16 | 216 | R216Y | CGc | TAc | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.605 | 0.005952 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.611 | 0.04 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp16 | 216 | R216L | cGc | cTc | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.632 | 0.006711 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.1.70 | 0.02439 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.81 | 0.021277 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | C.26 | 0.007353 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp16 | 216 | R216G | Cgc | Ggc | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | C.5 | 0.090909 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgA | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp16 | 216 | R216P | cGc | cCc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | P.1.17.1 | 0.000875 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp16 | 216 | R216del | CGC | --- | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp16 | 216 | R216N | CGc | AAc | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp16 | 216 | R216H | cGc | cAc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | Q.2 | 0.000613 |
ORF1ab/nsp16 | 216 | R216R | cgC | cgT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | Q.5 | 0.016949 |
ORF1ab/nsp16 | 216 | R216S | Cgc | Agc | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp16 | 216 | R216C | Cgc | Tgc | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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