CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp16 | 160 | K160R | K6958R | nonsyn | aAg | aGg | 89882 | 89882 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160K | K6958K | syn | aaG | aaA | 671 | 671 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160E | K6958E | nonsyn | Aag | Gag | 57 | 57 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160del | K6958del | del | AAG | --- | 37 | 37 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160N | K6958N | nonsyn | aaG | aaT | 17 | 15 | 0.882353 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160N | K6958N | nonsyn | aaG | aaC | 17 | 2 | 0.117647 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160M | K6958M | nonsyn | aAg | aTg | 8 | 8 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160Q | K6958Q | nonsyn | Aag | Cag | 7 | 7 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160X | K6958X | nonsyn | Aag | Tag | 3 | 3 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160G | K6958G | nonsyn | AAg | GGg | 2 | 2 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160del2 | K6958del2 | del | aAG | a-- | 1 | 1 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160S | K6958S | nonsyn | aAG | aGT | 1 | 1 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160I | K6958I | nonsyn | aAG | aTT | 1 | 1 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160L | K6958L | nonsyn | AAG | CTT | 1 | 1 | 1 | 21136-21138 |
ORF1ab/nsp16 | 160 | K160D | K6958D | nonsyn | AaG | GaT | 1 | 1 | 1 | 21136-21138 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 89882 | 89882 | All | 0.017191 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 44308 | 44308 | B.1.1.7 | 0.039666 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9333 | 9333 | B.1.617.2 | 0.035143 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4725 | 4725 | AY.102 | 0.125278 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3271 | 3271 | AY.4 | 0.005091 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2635 | 2635 | AY.39 | 0.065115 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1426 | 1426 | AY.3 | 0.014184 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1414 | 1414 | B.1.525 | 0.160009 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1392 | 1392 | AY.43 | 0.006167 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1283 | 1283 | AY.44 | 0.007809 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1254 | 1254 | AY.25 | 0.007543 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 884 | 884 | AY.120 | 0.032866 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 811 | 811 | Q.8 | 0.13374 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 796 | 796 | B.1.2 | 0.007009 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 684 | 684 | B.1 | 0.006265 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 671 | 671 | All | 0.000128 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 618 | 618 | B.1.429 | 0.014541 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 611 | 611 | AY.103 | 0.003794 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 584 | 584 | B.1.1 | 0.010594 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 495 | 495 | B.1.351 | 0.014715 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 493 | 493 | P.1 | 0.007767 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 467 | 467 | AY.47 | 0.014526 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 423 | 423 | B.1.240 | 0.091183 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 369 | 369 | AY.4.2 | 0.008003 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 360 | 360 | C.18 | 0.932642 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 311 | 311 | B.1.526 | 0.00731 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 295 | 295 | B.1.177 | 0.003884 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 289 | 289 | AY.33 | 0.019299 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 255 | 255 | B.1.469 | 0.920578 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 227 | 227 | AY.26 | 0.006426 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 206 | 206 | AY.5 | 0.004254 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 197 | 197 | AY.45 | 0.023972 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 197 | 197 | AY.99.2 | 0.018155 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 186 | 186 | AY.119 | 0.006567 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 181 | 181 | B.1.1.519 | 0.007188 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 177 | 177 | AY.46.4 | 0.029117 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 176 | 176 | AY.20 | 0.00684 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 175 | 175 | B.1.617.1 | 0.022569 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 168 | 168 | B.1.621 | 0.014871 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 162 | 162 | B.1.1.307 | 0.410127 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 157 | 157 | AY.29 | 0.002476 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 156 | 156 | AY.46 | 0.016236 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 143 | 143 | AY.79 | 0.173123 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 141 | 141 | AY.36 | 0.020898 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 135 | 135 | AY.107 | 0.062908 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 135 | 135 | B.1.1.222 | 0.02754 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 135 | 135 | B.1.637 | 0.009865 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 133 | 133 | AY.61 | 0.013935 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 127 | 127 | AY.84 | 0.055556 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 121 | 121 | B.1.311 | 0.033224 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 118 | 118 | B.1.427 | 0.005959 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 116 | 116 | AY.100 | 0.005337 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 109 | 109 | AY.117 | 0.009212 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 108 | 108 | AY.116 | 0.030972 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 108 | 108 | AY.42 | 0.004345 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 103 | 103 | AY.5.4 | 0.0285 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 101 | 101 | AY.37 | 0.031922 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 100 | 100 | AY.75 | 0.005602 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 93 | 93 | AY.54 | 0.008867 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 92 | 92 | B.1.416.1 | 0.14375 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 91 | 91 | C.37 | 0.010562 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 87 | 87 | AY.46.2 | 0.055273 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 87 | 87 | B.1.596 | 0.007581 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 85 | 85 | B.1.466.2 | 0.033255 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 78 | 78 | AY.23 | 0.00544 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 78 | 78 | B.1.258 | 0.005191 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 78 | 78 | B.1.36 | 0.01138 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 77 | 77 | P.1.1 | 0.02446 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 75 | 75 | B.1.1.333 | 0.080732 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 75 | 75 | B.1.1.7 | 0.000067 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 74 | 74 | AY.106 | 0.024782 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 71 | 71 | AY.9.2 | 0.002608 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 70 | 70 | B.1.1.432 | 0.088608 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 69 | 69 | AY.9 | 0.004664 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 69 | 69 | B.1.575 | 0.020934 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 68 | 68 | B.1.1.111 | 1 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 66 | 66 | AY.98.1 | 0.003196 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 65 | 65 | AY.46.6 | 0.004693 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 64 | 64 | B.1.160 | 0.001996 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 64 | 64 | B.1.177.65 | 0.042582 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 63 | 63 | B.1.1.459 | 0.969231 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 63 | 63 | B.1.470 | 0.088483 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 61 | 61 | AY.92 | 0.017524 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 59 | 59 | B.1.463 | 0.475806 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 58 | 58 | B.1.1.253 | 0.145363 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 57 | 57 | All | 0.000011 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 57 | 57 | B.1.1.231 | 0.176471 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 57 | 57 | P.1.14 | 0.002725 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 56 | 56 | AY.118 | 0.003508 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 55 | 55 | B.1.234 | 0.007257 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 54 | 54 | B.1.337 | 0.301676 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 51 | 51 | AY.14 | 0.004489 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 51 | 51 | B.1.1.434 | 0.017776 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 50 | 50 | AY.39.1 | 0.001981 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 49 | 49 | B.1.1.50 | 0.033265 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 49 | 49 | B.1.221 | 0.003481 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 49 | 49 | B.1.243 | 0.00341 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 46 | 46 | R.1 | 0.00414 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 45 | 45 | AY.98 | 0.003555 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 43 | 43 | AY.111 | 0.007875 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 42 | 42 | AY.9.1 | 0.003516 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 42 | 42 | B.1.1.384 | 1 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 41 | 41 | B.1.1.28 | 0.012761 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 40 | 40 | AY.6 | 0.001645 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 40 | 40 | B.1.139 | 0.029326 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 39 | 39 | AY.113 | 0.005553 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 39 | 39 | AY.34 | 0.003782 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 38 | 38 | AY.3.1 | 0.00324 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 38 | 38 | AY.5.3 | 0.012821 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 38 | 38 | D.2 | 0.002852 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 37 | 37 | All | 0.000007 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 37 | 37 | B.1.1.284 | 0.003974 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 37 | 37 | B.1.177.86 | 0.006788 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 36 | 36 | P.2 | 0.006719 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 35 | 35 | B.1.1.306 | 0.015344 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 34 | 34 | AY.75.1 | 0.006131 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 34 | 34 | B.1.1.318 | 0.01026 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 33 | 33 | B.1.1.518 | 0.208861 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 33 | 33 | P.1.15 | 0.007667 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 32 | 32 | AY.34.1 | 0.016318 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 31 | 31 | AY.64 | 0.018452 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 31 | 31 | AY.68 | 0.008486 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 31 | 31 | B.1.628 | 0.010923 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 31 | 31 | Q.4 | 0.014097 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 30 | 30 | AM.3 | 1 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 30 | 30 | B.1.1.1 | 0.009801 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 29 | 29 | AY.105 | 0.01865 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 29 | 29 | AY.27 | 0.001877 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 29 | 29 | AY.88 | 0.025641 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 29 | 29 | B.1.36.29 | 0.015003 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 28 | 28 | AY.121 | 0.003789 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 28 | 28 | AY.22 | 0.058577 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 28 | 28 | AY.4 | 0.000044 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 28 | 28 | B.1.1.70 | 0.00955 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 28 | 28 | C.36 | 0.025501 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 27 | 27 | AY.85 | 0.011534 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 27 | 27 | B.1.1.33 | 0.011364 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 27 | 27 | B.1.429 | 0.000635 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 26 | 26 | AY.4.2.1 | 0.003874 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 26 | 26 | B.1.177.21 | 0.001988 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 26 | 26 | B.1.177.77 | 0.018882 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 24 | 24 | AY.114 | 0.005547 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 24 | 24 | AY.74 | 0.002776 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 24 | 24 | B.1.1.39 | 0.012232 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 24 | 24 | B.1.1.458 | 1 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 23 | 23 | AY.50 | 0.018385 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 23 | 23 | AY.82 | 0.031208 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 23 | 23 | B.1.517 | 0.009821 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 23 | 23 | B.40 | 0.008379 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 22 | 22 | AY.3 | 0.000219 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 22 | 22 | AY.4.1 | 0.016224 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 21 | 21 | AY.12 | 0.006637 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 21 | 21 | AY.46.1 | 0.021561 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 21 | 21 | AY.73 | 0.013972 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 20 | 20 | AY.16 | 0.007593 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 20 | 20 | AY.29.1 | 0.00441 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 20 | 20 | AY.43 | 0.000089 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 20 | 20 | B.1.1.219 | 0.1 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 20 | 20 | B.1.177.60 | 0.004369 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 19 | 19 | AY.35 | 0.004428 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 19 | 19 | B.1.1.301 | 0.022406 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 18 | 18 | AY.110 | 0.002028 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 18 | 18 | AY.13 | 0.002898 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 18 | 18 | AY.52 | 0.014658 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 18 | 18 | B.1.595 | 0.004697 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 18 | 18 | P.1.7 | 0.005747 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 15 | 17 | All | 0.000003 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaC | 2 | 17 | All | 0 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 17 | 17 | B | 0.002173 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 17 | 17 | B.1.177.82 | 0.008115 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 17 | 17 | B.1.239 | 0.020757 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 17 | 17 | B.1.561 | 0.006749 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 16 | 16 | AY.30 | 0.006332 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 16 | 16 | B.1.177.52 | 0.02812 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 16 | 16 | C.36.3 | 0.009075 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | AY.24 | 0.006466 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | AY.4.5 | 0.001612 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | AY.60 | 0.014071 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | AY.65 | 0.007996 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | B.1.1.265 | 0.047319 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | B.1.168 | 0.405405 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | B.1.396 | 0.010586 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 15 | 15 | B.1.577 | 0.010309 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 14 | 14 | AY.32 | 0.007455 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 14 | 14 | B.1 | 0.000128 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 14 | 14 | B.1.1.113 | 0.097902 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 14 | 14 | B.1.2 | 0.000123 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 14 | 14 | B.1.564.1 | 0.022082 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 13 | 13 | A.2.5 | 0.006487 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 13 | 13 | AY.56 | 0.020867 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 13 | 13 | AY.59 | 0.006886 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 13 | 13 | AY.94 | 0.005755 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 13 | 13 | Q.1 | 0.001642 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | A.27 | 0.019868 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | AY.16.1 | 0.005639 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | AY.53 | 0.00345 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | AY.57 | 0.007874 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | AY.87 | 0.009992 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | AY.89 | 0.058824 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | B.1.1.416 | 0.01086 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | B.1.232 | 0.006448 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 12 | 12 | B.1.400 | 0.005148 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 12 | 12 | B.1.617.2 | 0.000045 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | AD.2 | 0.002409 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | AY.19 | 0.012543 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | AY.70 | 0.002294 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | AY.71 | 0.005226 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | AY.86 | 0.009129 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.1.279 | 0.012332 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 11 | 11 | B.1.177.75 | 0.011446 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.177.81 | 0.002083 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.214.2 | 0.006595 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.258.17 | 0.001144 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.258.22 | 0.029333 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.351.2 | 0.003328 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.36.18 | 0.004622 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.36.26 | 0.031429 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 11 | 11 | B.1.438.1 | 0.00118 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | AY.10 | 0.005299 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | AY.108 | 0.011025 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | AY.77 | 0.011274 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | AY.97 | 0.017007 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.1.207 | 0.01182 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.1.291 | 0.007424 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.1.312 | 0.01912 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.1.317 | 0.004117 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.474 | 0.019011 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | B.1.626 | 0.057143 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | N.5 | 0.017668 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | P.1.12 | 0.00484 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 10 | 10 | Q.3 | 0.00145 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AL.1 | 0.116883 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.116.1 | 0.002803 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.4.3 | 0.007576 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.55 | 0.008257 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.8 | 0.005455 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.91 | 0.006574 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | AY.95 | 0.006849 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | B.1.177.12 | 0.001365 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | B.1.177.54 | 0.005458 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 9 | 9 | B.1.623 | 0.004828 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | A.1 | 0.002255 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 8 | 8 | All | 0.000002 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | AY.120.1 | 0.002568 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | AY.41 | 0.002352 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | AY.48 | 0.003721 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | AY.58 | 0.00726 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.1.244 | 0.123077 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 8 | 8 | B.1.1.519 | 0.000318 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.336 | 0.019512 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.351.5 | 0.004796 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.404 | 0.010417 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.499 | 0.008403 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.588 | 0.007279 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.599 | 0.029197 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 8 | 8 | B.1.609 | 0.003835 |
ORF1ab/nsp16 | 160 | K160Q | Aag | Cag | 7 | 7 | All | 0.000001 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | AY.109 | 0.005178 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | AY.2 | 0.002493 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | AY.51 | 0.006364 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | AY.90 | 0.004791 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | AY.99 | 0.007345 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.1.174 | 0.023649 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.1.216 | 0.006233 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.1.232 | 0.012704 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.1.63 | 0.002701 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.177.51 | 0.031963 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.177.72 | 0.023729 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.462 | 0.050725 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.565 | 0.005673 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | B.1.606 | 0.042169 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | C.35 | 0.005418 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 7 | 7 | P.3 | 0.011164 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | A.2.5.1 | 0.028846 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.1 | 0.002374 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 6 | 6 | AY.25 | 0.000036 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 6 | 6 | AY.34 | 0.000582 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.40 | 0.005786 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.46.5 | 0.00119 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.66 | 0.006417 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.7.1 | 0.000676 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | AY.96 | 0.012448 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 6 | 6 | B.1.1.121 | 0.014563 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.153 | 0.006572 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.189 | 0.009077 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.263 | 0.009346 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.326 | 0.010563 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.37 | 0.001157 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.1.526 | 0.021277 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.110.3 | 0.00431 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.126 | 0.007653 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.349 | 0.004289 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.416 | 0.007614 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | B.1.551 | 0.007742 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | C.11 | 0.06383 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 6 | 6 | P.1.17 | 0.000971 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | A | 0.001935 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 5 | 5 | A.23.1 | 0.003521 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | A.23.1 | 0.003521 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | AY.104 | 0.009921 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 5 | 5 | AY.44 | 0.00003 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | AY.78 | 0.007704 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | AY.83 | 0.008621 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.220 | 0.009294 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.277 | 0.003794 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.294 | 0.006329 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.300 | 0.053763 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.348 | 0.003981 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.448 | 0.010163 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.1.58 | 0.026882 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.160.10 | 0.040323 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.177.4 | 0.001055 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.177.57 | 0.001405 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.177.73 | 0.002831 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.214.3 | 0.035714 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.265 | 0.006353 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.279 | 0.002568 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.36.17 | 0.00247 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.497 | 0.001574 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.523 | 0.012255 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.617.3 | 0.014925 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | B.1.632 | 0.033557 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | P.1.10 | 0.001347 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 5 | 5 | P.1.5 | 0.384615 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | A.2 | 0.002647 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AP.1 | 0.006006 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 4 | 4 | AY.13 | 0.000644 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AY.23.1 | 0.001669 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AY.62 | 0.001743 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AY.67 | 0.001857 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AY.7 | 0.000784 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AY.80 | 0.004515 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | AZ.1 | 0.003469 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.1.118 | 0.040816 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.1.214 | 0.000222 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.1.34 | 0.052632 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 4 | 4 | B.1.1.372 | 0.002755 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.1.53 | 0.054795 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.1.56 | 0.071429 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.146 | 0.016949 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.177.35 | 0.002764 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.177.44 | 0.002076 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.243.2 | 0.057971 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.305 | 0.008602 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.320 | 0.004981 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.36.1 | 0.004561 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.36.22 | 0.004831 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.362 | 0.006163 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.362.2 | 0.018868 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.369 | 0.001141 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.1.582 | 0.001963 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | B.6 | 0.00364 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | N.4 | 0.017021 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 4 | 4 | N.9 | 0.02381 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | A.2.4 | 0.010101 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | AE.8 | 0.001467 |
ORF1ab/nsp16 | 160 | K160X | Aag | Tag | 3 | 3 | All | 0.000001 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | AY.11 | 0.004016 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | AY.38 | 0.001498 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | AY.99.1 | 0.004658 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.125 | 0.030612 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.172 | 0.054545 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.176 | 0.001318 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.192 | 0.006928 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.243 | 0.012245 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.25 | 0.001706 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.286 | 0.008696 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.372 | 0.002066 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.1.389 | 0.018182 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.160.14 | 0.006356 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.160.26 | 0.007264 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.162 | 0.015075 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp16 | 160 | K160Q | Aag | Cag | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.16 | 0.001993 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.19 | 0.004292 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.53 | 0.007177 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 3 | 3 | B.1.177.60 | 0.000655 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.68 | 0.045455 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.8 | 0.002257 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.177.87 | 0.002183 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.179 | 0.011278 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.258.5 | 0.026316 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.36.31 | 0.005254 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.399 | 0.005803 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.426 | 0.003027 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.465 | 0.011407 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.509 | 0.002597 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 3 | 3 | B.1.526 | 0.000071 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.574 | 0.006452 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.587 | 0.005693 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.619.1 | 0.001924 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | B.1.621.1 | 0.001517 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 3 | 3 | P.1.8 | 0.014354 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | A.29 | 0.010638 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | A.3 | 0.004193 |
ORF1ab/nsp16 | 160 | K160G | AAg | GGg | 2 | 2 | All | 0 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AM.4 | 0.007143 |
ORF1ab/nsp16 | 160 | K160Q | Aag | Cag | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AY.63 | 0.000774 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | AZ.2 | 0.001642 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.141 | 0.004024 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.186 | 0.006873 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.258 | 0.006515 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.261 | 0.017241 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.305 | 0.007722 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.368 | 0.006173 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.396 | 0.090909 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.462 | 0.017241 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.487 | 0.011173 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.500 | 0.04 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.507 | 0.017391 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.51 | 0.003436 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.523 | 0.003125 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.525 | 0.010929 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.1.59 | 0.012987 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp16 | 160 | K160Q | Aag | Cag | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.143 | 0.042553 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.177.10 | 0.001756 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.177.24 | 0.002591 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.177.42 | 0.001789 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.210 | 0.004264 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.214.1 | 0.04 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.218 | 0.010309 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.221.4 | 0.008333 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.23 | 0.012121 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.251 | 0.043478 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.346 | 0.002621 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.350 | 0.005865 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.351.1 | 0.076923 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 2 | 2 | B.1.36.19 | 0.018519 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.36.28 | 0.011494 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.36.9 | 0.006431 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.378 | 0.013699 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.395 | 0.014085 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.471 | 0.005464 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.480 | 0.004975 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.538 | 0.016129 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.540 | 0.019417 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.544 | 0.012048 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.612 | 0.005305 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.625 | 0.004706 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.634 | 0.006849 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.9 | 0.012346 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.1.9.4 | 0.01227 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.28 | 0.006557 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.29 | 0.007018 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | C.14 | 0.008658 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | C.23 | 0.011628 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | C.26 | 0.014706 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 2 | 2 | C.37.1 | 0.005236 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | A.11 | 0.058824 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp16 | 160 | K160D | AaG | GaT | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | A.22 | 0.066667 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AH.1 | 0.142857 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AH.3 | 0.003802 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AK.1 | 0.012658 |
ORF1ab/nsp16 | 160 | K160L | AAG | CTT | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 160 | K160I | aAG | aTT | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 160 | K160D | AaG | GaT | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 160 | K160S | aAG | aGT | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 160 | K160del2 | aAG | a-- | 1 | 1 | All | 0 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AV.1 | 0.005051 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.115 | 0.005208 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp16 | 160 | K160G | AAg | GGg | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp16 | 160 | K160X | Aag | Tag | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 160 | K160del2 | aAG | a-- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.115 | 0.008929 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.213 | 0.021739 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.217 | 0.003636 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.225 | 0.007194 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.226 | 0.005814 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.234 | 0.012048 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.273 | 0.006757 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.3 | 0.008696 |
ORF1ab/nsp16 | 160 | K160S | aAG | aGT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.309 | 0.005848 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.310 | 0.015152 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.433 | 0.001425 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.436 | 0.025641 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp16 | 160 | K160G | AAg | GGg | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.134 | 0.005464 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.167 | 0.007812 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.2 | 0.004545 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.32 | 0.00135 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.85 | 0.005435 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.177.88 | 0.012346 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.238 | 0.014925 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.247 | 0.014925 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.256 | 0.017241 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.267 | 0.018519 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.281 | 0.021739 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.293 | 0.0125 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.310 | 0.047619 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.318 | 0.038462 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.35 | 0.008475 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaC | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp16 | 160 | K160L | AAG | CTT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.27 | 0.000763 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.34 | 0.021277 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.39 | 0.003906 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.417 | 0.028571 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.508 | 0.025641 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.545 | 0.014493 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.549 | 0.007194 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.572 | 0.025 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.589 | 0.007576 |
ORF1ab/nsp16 | 160 | K160X | Aag | Tag | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp16 | 160 | K160I | aAG | aTT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp16 | 160 | K160E | Aag | Gag | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.3.1 | 0.001658 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | C.31 | 0.017857 |
ORF1ab/nsp16 | 160 | K160M | aAg | aTg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | D.5 | 0.004975 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | L.3 | 0.003546 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | N.8 | 0.03125 |
ORF1ab/nsp16 | 160 | K160del | AAG | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp16 | 160 | K160N | aaG | aaT | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp16 | 160 | K160K | aaG | aaA | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp16 | 160 | K160X | Aag | Tag | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | Q.5 | 0.016949 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | Q.6 | 0.006623 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | U.3 | 0.003861 |
ORF1ab/nsp16 | 160 | K160R | aAg | aGg | 1 | 1 | V.2 | 0.032258 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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