CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 140

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16140T140IT6938InonsynaCaaTa14906149050.99993321076-21078
ORF1ab/nsp16140T140IT6938InonsynaCAaTC1490610.000067087121076-21078
ORF1ab/nsp16140T140KT6938KnonsynaCaaAa2772750.9927821076-21078
ORF1ab/nsp16140T140KT6938KnonsynaCAaAG27720.0072202221076-21078
ORF1ab/nsp16140T140TT6938TsynacAacG2121340.63207521076-21078
ORF1ab/nsp16140T140TT6938TsynacAacC212440.20754721076-21078
ORF1ab/nsp16140T140TT6938TsynacAacT212340.16037721076-21078
ORF1ab/nsp16140T140AT6938AnonsynAcaGca150150121076-21078
ORF1ab/nsp16140T140RT6938RnonsynaCaaGa84820.9761921076-21078
ORF1ab/nsp16140T140RT6938RnonsynaCAaGG8420.023809521076-21078
ORF1ab/nsp16140T140del1T6938del1delacAac-48430.89583321076-21078
ORF1ab/nsp16140T140del1T6938del1delaCaa-a4830.062521076-21078
ORF1ab/nsp16140T140del1T6938del1delaCAa-N4810.020833321076-21078
ORF1ab/nsp16140T140del1T6938del1delAca-ca4810.020833321076-21078
ORF1ab/nsp16140T140delT6938deldelACA---4747121076-21078
ORF1ab/nsp16140T140ST6938SnonsynAcaTca650.83333321076-21078
ORF1ab/nsp16140T140ST6938SnonsynAcATcT610.16666721076-21078
ORF1ab/nsp16140T140PT6938PnonsynAcaCca22121076-21078
ORF1ab/nsp16140T140del2T6938del2delaCAa--22121076-21078
ORF1ab/nsp16140T140MT6938MnonsynaCAaTG22121076-21078
ORF1ab/nsp16140T140QT6938QnonsynACaCAa11121076-21078
ORF1ab/nsp16140T140NT6938NnonsynaCAaAC11121076-21078
ORF1ab/nsp16140T140VT6938VnonsynACaGTa11121076-21078

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16140T140IaCaaTa1490514906All0.002851
ORF1ab/nsp16140T140IaCAaTC114906All0
ORF1ab/nsp16140T140IaCaaTa82948294B.1.1.70.007425
ORF1ab/nsp16140T140IaCaaTa10791079AY.360.159923
ORF1ab/nsp16140T140IaCaaTa578578B.1.1.700.197135
ORF1ab/nsp16140T140IaCaaTa418418B.1.1.5190.016599
ORF1ab/nsp16140T140IaCaaTa414414B.1.617.20.001559
ORF1ab/nsp16140T140IaCaaTa325325AY.40.000506
ORF1ab/nsp16140T140IaCaaTa292292B.1.20.002571
ORF1ab/nsp16140T140KaCaaAa275277All0.000053
ORF1ab/nsp16140T140KaCAaAG2277All0
ORF1ab/nsp16140T140IaCaaTa252252P.10.00397
ORF1ab/nsp16140T140TacAacG134212All0.000026
ORF1ab/nsp16140T140TacAacC44212All0.000008
ORF1ab/nsp16140T140TacAacT34212All0.000007
ORF1ab/nsp16140T140AAcaGca150150All0.000029
ORF1ab/nsp16140T140IaCaaTa140140AY.440.000852
ORF1ab/nsp16140T140IaCaaTa140140B.1.1770.001843
ORF1ab/nsp16140T140IaCaaTa130130AY.430.000576
ORF1ab/nsp16140T140IaCaaTa120120B.1.6210.010622
ORF1ab/nsp16140T140IaCaaTa117117AY.250.000704
ORF1ab/nsp16140T140IaCaaTa112112B.1.1600.003493
ORF1ab/nsp16140T140IaCaaTa101101AY.4.20.002191
ORF1ab/nsp16140T140IaCaaTa9192B.10.000834
ORF1ab/nsp16140T140IaCAaTC192B.10.000009
ORF1ab/nsp16140T140IaCaaTa9090AY.1020.002386
ORF1ab/nsp16140T140IaCaaTa8787AY.1030.00054
ORF1ab/nsp16140T140IaCaaTa8585B.1.4290.002
ORF1ab/nsp16140T140RaCaaGa8284All0.000016
ORF1ab/nsp16140T140RaCAaGG284All0
ORF1ab/nsp16140T140KaCaaAa8484B.1.1770.001106
ORF1ab/nsp16140T140IaCaaTa8282AY.30.000816
ORF1ab/nsp16140T140IaCaaTa7676AY.260.002152
ORF1ab/nsp16140T140IaCaaTa7474B.1.3510.0022
ORF1ab/nsp16140T140IaCaaTa6868B.1.5260.001598
ORF1ab/nsp16140T140IaCaaTa6767AY.1210.009066
ORF1ab/nsp16140T140IaCaaTa6767C.370.007776
ORF1ab/nsp16140T140IaCaaTa6262P.1.140.002964
ORF1ab/nsp16140T140IaCaaTa5959B.1.10.00107
ORF1ab/nsp16140T140IaCaaTa5858AY.1000.002668
ORF1ab/nsp16140T140IaCaaTa5858Q.30.008412
ORF1ab/nsp16140T140RaCaaGa5757B.1.1.70.000051
ORF1ab/nsp16140T140KaCaaAa5151B.1.1.70.000046
ORF1ab/nsp16140T140IaCaaTa5151B.1.5250.005771
ORF1ab/nsp16140T140IaCaaTa4949AY.390.001211
ORF1ab/nsp16140T140del1acAac-4348All0.000008
ORF1ab/nsp16140T140del1aCaa-a348All0.000001
ORF1ab/nsp16140T140del1Aca-ca148All0
ORF1ab/nsp16140T140del1aCAa-N148All0
ORF1ab/nsp16140T140IaCaaTa4848B.1.4270.002424
ORF1ab/nsp16140T140delACA---4747All0.000009
ORF1ab/nsp16140T140IaCaaTa4141B.1.6161
ORF1ab/nsp16140T140IaCaaTa4040B.1.1.1740.135135
ORF1ab/nsp16140T140KaCaaAa3939AY.140.003432
ORF1ab/nsp16140T140IaCaaTa3838AY.1190.001342
ORF1ab/nsp16140T140AAcaGca3535B.1.20.000308
ORF1ab/nsp16140T140IaCaaTa3434Q.10.004295
ORF1ab/nsp16140T140IaCaaTa3232AY.50.000661
ORF1ab/nsp16140T140TacAacG3132B.1.20.000273
ORF1ab/nsp16140T140TacAacT132B.1.20.000009
ORF1ab/nsp16140T140AAcaGca3131AY.40.000048
ORF1ab/nsp16140T140TacAacC2828AY.140.002464
ORF1ab/nsp16140T140IaCaaTa2828Q.80.004617
ORF1ab/nsp16140T140IaCaaTa2626P.1.120.012585
ORF1ab/nsp16140T140IaCaaTa2626P.1.150.006041
ORF1ab/nsp16140T140IaCaaTa2525AY.470.000778
ORF1ab/nsp16140T140AAcaGca2525C.36.30.01418
ORF1ab/nsp16140T140KaCaaAa2424AY.430.000106
ORF1ab/nsp16140T140IaCaaTa2424AY.610.002515
ORF1ab/nsp16140T140IaCaaTa2323B.1.2210.001634
ORF1ab/nsp16140T140IaCaaTa2222AY.330.001469
ORF1ab/nsp16140T140IaCaaTa2222B.1.1.390.011213
ORF1ab/nsp16140T140IaCaaTa2121B.1.6230.011266
ORF1ab/nsp16140T140TacAacG1520B.1.1.70.000013
ORF1ab/nsp16140T140TacAacT520B.1.1.70.000004
ORF1ab/nsp16140T140IaCaaTa1919AY.750.001064
ORF1ab/nsp16140T140TacAacG1919B.1.4250.056886
ORF1ab/nsp16140T140IaCaaTa1919B.1.5960.001656
ORF1ab/nsp16140T140IaCaaTa1717AY.1200.000632
ORF1ab/nsp16140T140IaCaaTa1717B.1.177.810.003218
ORF1ab/nsp16140T140TacAacG1616AY.1180.001002
ORF1ab/nsp16140T140IaCaaTa1616AY.4.50.00172
ORF1ab/nsp16140T140IaCaaTa1616AY.730.010645
ORF1ab/nsp16140T140IaCaaTa1515AY.98.10.000726
ORF1ab/nsp16140T140IaCaaTa1515B.1.1.2970.033557
ORF1ab/nsp16140T140IaCaaTa1414AY.290.000221
ORF1ab/nsp16140T140KaCaaAa1414AY.4.20.000304
ORF1ab/nsp16140T140IaCaaTa1414AY.460.001457
ORF1ab/nsp16140T140TacAacT1414B.1.5260.000329
ORF1ab/nsp16140T140IaCaaTa1313AY.230.000907
ORF1ab/nsp16140T140IaCaaTa1313AY.9.20.000477
ORF1ab/nsp16140T140delACA---1313B.1.1.70.000012
ORF1ab/nsp16140T140IaCaaTa1313B.1.4990.013655
ORF1ab/nsp16140T140IaCaaTa1313P.20.002426
ORF1ab/nsp16140T140IaCaaTa1212AY.39.10.000475
ORF1ab/nsp16140T140IaCaaTa1212AY.60.000494
ORF1ab/nsp16140T140IaCaaTa1212B.1.2430.000835
ORF1ab/nsp16140T140IaCaaTa1212B.1.6370.000877
ORF1ab/nsp16140T140IaCaaTa1212P.1.70.003831
ORF1ab/nsp16140T140IaCaaTa1111AY.1170.00093
ORF1ab/nsp16140T140IaCaaTa1010AY.200.000389
ORF1ab/nsp16140T140IaCaaTa1010AY.380.004993
ORF1ab/nsp16140T140KaCaaAa1010AY.9.20.000367
ORF1ab/nsp16140T140IaCaaTa1010AY.99.20.000922
ORF1ab/nsp16140T140del1acAac-910B.1.20.000079
ORF1ab/nsp16140T140del1Aca-ca110B.1.20.000009
ORF1ab/nsp16140T140IaCaaTa99AY.1180.000564
ORF1ab/nsp16140T140KaCaaAa99AY.200.00035
ORF1ab/nsp16140T140IaCaaTa99AY.370.002845
ORF1ab/nsp16140T140IaCaaTa99B.1.1.2840.000967
ORF1ab/nsp16140T140IaCaaTa99B.1.1.330.003788
ORF1ab/nsp16140T140IaCaaTa99B.1.3620.013867
ORF1ab/nsp16140T140RaCaaGa99B.1.4290.000212
ORF1ab/nsp16140T140TacAacT99B.1.4290.000212
ORF1ab/nsp16140T140TacAacG88AY.1030.00005
ORF1ab/nsp16140T140IaCaaTa88AY.420.000322
ORF1ab/nsp16140T140IaCaaTa88AY.450.000973
ORF1ab/nsp16140T140AAcaGca88B.1.10.000145
ORF1ab/nsp16140T140IaCaaTa88B.1.617.10.001032
ORF1ab/nsp16140T140IaCaaTa88C.230.046512
ORF1ab/nsp16140T140IaCaaTa88P.1.170.001294
ORF1ab/nsp16140T140TacAacG67AY.440.000037
ORF1ab/nsp16140T140TacAacC17AY.440.000006
ORF1ab/nsp16140T140IaCaaTa77AY.680.001916
ORF1ab/nsp16140T140TacAacC77AY.980.000553
ORF1ab/nsp16140T140IaCaaTa77B.1.1.2140.000388
ORF1ab/nsp16140T140IaCaaTa77B.1.2580.000466
ORF1ab/nsp16140T140IaCaaTa77B.1.258.170.000728
ORF1ab/nsp16140T140TacAacG57B.1.617.20.000019
ORF1ab/nsp16140T140TacAacT17B.1.617.20.000004
ORF1ab/nsp16140T140TacAacC17B.1.617.20.000004
ORF1ab/nsp16140T140SAcaTca56All0.000001
ORF1ab/nsp16140T140SAcATcT16All0
ORF1ab/nsp16140T140AAcaGca66AY.1190.000212
ORF1ab/nsp16140T140del1acAac-66AY.120.10.001926
ORF1ab/nsp16140T140AAcaGca66AY.390.000148
ORF1ab/nsp16140T140del1acAac-66AY.440.000037
ORF1ab/nsp16140T140AAcaGca66AY.440.000037
ORF1ab/nsp16140T140IaCaaTa66AY.75.10.001082
ORF1ab/nsp16140T140IaCaaTa66B.1.177.210.000459
ORF1ab/nsp16140T140IaCaaTa66B.1.177.70.000989
ORF1ab/nsp16140T140IaCaaTa66B.1.466.20.002347
ORF1ab/nsp16140T140IaCaaTa66C.36.30.003403
ORF1ab/nsp16140T140AAcaGca55AY.250.00003
ORF1ab/nsp16140T140IaCaaTa55AY.340.000485
ORF1ab/nsp16140T140delACA---55AY.40.000008
ORF1ab/nsp16140T140IaCaaTa55AY.540.000477
ORF1ab/nsp16140T140IaCaaTa55AY.590.002648
ORF1ab/nsp16140T140KaCaaAa55AY.810.00996
ORF1ab/nsp16140T140IaCaaTa55AY.920.001436
ORF1ab/nsp16140T140del1acAac-55B.10.000046
ORF1ab/nsp16140T140IaCaaTa55B.1.1.2070.00591
ORF1ab/nsp16140T140IaCaaTa55B.1.1.280.001556
ORF1ab/nsp16140T140IaCaaTa55B.1.2180.025773
ORF1ab/nsp16140T140IaCaaTa55B.1.3240.008026
ORF1ab/nsp16140T140IaCaaTa55B.1.6200.00473
ORF1ab/nsp16140T140KaCAaAG240.111111
ORF1ab/nsp16140T140RaCAaGG240.111111
ORF1ab/nsp16140T140RaCaaGa240.111111
ORF1ab/nsp16140T140KaCaaAa240.111111
ORF1ab/nsp16140T140IaCaaTa44AY.1110.000733
ORF1ab/nsp16140T140IaCaaTa44AY.140.000352
ORF1ab/nsp16140T140IaCaaTa44AY.160.001519
ORF1ab/nsp16140T140IaCaaTa44AY.16.10.00188
ORF1ab/nsp16140T140KaCaaAa44AY.40.000006
ORF1ab/nsp16140T140delACA---44AY.4.50.00043
ORF1ab/nsp16140T140IaCaaTa44AY.740.000463
ORF1ab/nsp16140T140TacAacG24B.10.000018
ORF1ab/nsp16140T140TacAacC14B.10.000009
ORF1ab/nsp16140T140TacAacT14B.10.000009
ORF1ab/nsp16140T140IaCaaTa44B.1.1.630.001543
ORF1ab/nsp16140T140IaCaaTa44B.1.177.600.000874
ORF1ab/nsp16140T140KaCaaAa44B.1.20.000035
ORF1ab/nsp16140T140IaCaaTa44B.1.2220.006768
ORF1ab/nsp16140T140IaCaaTa44B.1.3490.002859
ORF1ab/nsp16140T140IaCaaTa44B.1.36.310.007005
ORF1ab/nsp16140T140KaCaaAa44B.1.5260.000094
ORF1ab/nsp16140T140IaCaaTa44B.1.5610.001588
ORF1ab/nsp16140T140IaCaaTa44B.1.5950.001044
ORF1ab/nsp16140T140IaCaaTa44Q.40.001819
ORF1ab/nsp16140T140IaCaaTa44R.10.00036
ORF1ab/nsp16140T140IaCaaTa33A.2.50.001497
ORF1ab/nsp16140T140IaCaaTa33AE.80.001467
ORF1ab/nsp16140T140IaCaaTa33AU.30.006329
ORF1ab/nsp16140T140IaCaaTa33AY.1060.001005
ORF1ab/nsp16140T140IaCaaTa33AY.1140.000693
ORF1ab/nsp16140T140IaCaaTa33AY.270.000194
ORF1ab/nsp16140T140KaCaaAa33AY.340.000291
ORF1ab/nsp16140T140IaCaaTa33AY.46.40.000494
ORF1ab/nsp16140T140IaCaaTa33AY.480.001395
ORF1ab/nsp16140T140IaCaaTa33AY.5.30.001012
ORF1ab/nsp16140T140IaCaaTa33AY.5.40.00083
ORF1ab/nsp16140T140IaCaaTa33AY.530.000863
ORF1ab/nsp16140T140IaCaaTa33AY.650.001599
ORF1ab/nsp16140T140IaCaaTa33B.1.1.2220.000612
ORF1ab/nsp16140T140IaCaaTa33B.1.1.3180.000905
ORF1ab/nsp16140T140IaCaaTa33B.1.1.370.000579
ORF1ab/nsp16140T140TacAacG33B.1.1600.000094
ORF1ab/nsp16140T140IaCaaTa33B.1.1990.012397
ORF1ab/nsp16140T140IaCaaTa33B.1.2340.000396
ORF1ab/nsp16140T140IaCaaTa33B.1.36.290.001552
ORF1ab/nsp16140T140IaCaaTa33B.1.36.80.003
ORF1ab/nsp16140T140IaCaaTa33B.1.438.10.000322
ORF1ab/nsp16140T140AAcaGca33B.1.5260.000071
ORF1ab/nsp16140T140IaCaaTa33B.1.564.10.004732
ORF1ab/nsp16140T140IaCaaTa33B.1.5750.00091
ORF1ab/nsp16140T140IaCaaTa33B.1.5990.010949
ORF1ab/nsp16140T140IaCaaTa33B.1.60.051724
ORF1ab/nsp16140T140IaCaaTa33B.1.6090.001438
ORF1ab/nsp16140T140del1acAac-33B.1.617.20.000011
ORF1ab/nsp16140T140IaCaaTa33B.60.00273
ORF1ab/nsp16140T140delACA---33P.1.150.000697
ORF1ab/nsp16140T140del2aCAa--220.111111
ORF1ab/nsp16140T140delACA---220.111111
ORF1ab/nsp16140T140IaCaaTa22A.20.001324
ORF1ab/nsp16140T140IaCaaTa22A.2.5.30.020619
ORF1ab/nsp16140T140IaCaaTa22AD.20.000438
ORF1ab/nsp16140T140MaCAaTG22All0
ORF1ab/nsp16140T140PAcaCca22All0
ORF1ab/nsp16140T140del2aCAa--22All0
ORF1ab/nsp16140T140IaCaaTa22AP.10.003003
ORF1ab/nsp16140T140IaCaaTa22AY.1050.001286
ORF1ab/nsp16140T140IaCaaTa22AY.1160.000574
ORF1ab/nsp16140T140IaCaaTa22AY.120.000632
ORF1ab/nsp16140T140IaCaaTa22AY.130.000322
ORF1ab/nsp16140T140IaCaaTa22AY.29.10.000441
ORF1ab/nsp16140T140RaCaaGa22AY.30.00002
ORF1ab/nsp16140T140IaCaaTa22AY.34.10.00102
ORF1ab/nsp16140T140TacAacG22AY.40.000003
ORF1ab/nsp16140T140IaCaaTa22AY.400.001929
ORF1ab/nsp16140T140KaCaaAa22AY.420.00008
ORF1ab/nsp16140T140TacAacG22AY.430.000009
ORF1ab/nsp16140T140IaCaaTa22AY.46.60.000144
ORF1ab/nsp16140T140TacAacG22AY.50.000041
ORF1ab/nsp16140T140IaCaaTa22AY.520.001629
ORF1ab/nsp16140T140IaCaaTa22AY.550.001835
ORF1ab/nsp16140T140IaCaaTa22AY.620.000871
ORF1ab/nsp16140T140IaCaaTa22AY.670.000929
ORF1ab/nsp16140T140del1acAac-22AY.750.000112
ORF1ab/nsp16140T140IaCaaTa22AY.770.002255
ORF1ab/nsp16140T140IaCaaTa22AY.780.003082
ORF1ab/nsp16140T140IaCaaTa22AY.80.001212
ORF1ab/nsp16140T140IaCaaTa22AY.850.000854
ORF1ab/nsp16140T140IaCaaTa22AY.870.001665
ORF1ab/nsp16140T140IaCaaTa22AY.90.000135
ORF1ab/nsp16140T140IaCaaTa22AY.900.001369
ORF1ab/nsp16140T140IaCaaTa22B0.000256
ORF1ab/nsp16140T140KaCaaAa22B.10.000018
ORF1ab/nsp16140T140AAcaGca22B.10.000018
ORF1ab/nsp16140T140TacAacG12B.1.10.000018
ORF1ab/nsp16140T140TacAacC12B.1.10.000018
ORF1ab/nsp16140T140AAcaGca22B.1.1.10.000653
ORF1ab/nsp16140T140IaCaaTa22B.1.1.2200.003717
ORF1ab/nsp16140T140IaCaaTa22B.1.1.2910.001485
ORF1ab/nsp16140T140IaCaaTa22B.1.1.2940.002532
ORF1ab/nsp16140T140IaCaaTa22B.1.1.3110.000716
ORF1ab/nsp16140T140IaCaaTa22B.1.1.3170.000823
ORF1ab/nsp16140T140IaCaaTa22B.1.1.4320.002532
ORF1ab/nsp16140T140IaCaaTa22B.1.1.4340.000697
ORF1ab/nsp16140T140AAcaGca22B.1.1.70.000002
ORF1ab/nsp16140T140del1acAac-12B.1.1.70.000001
ORF1ab/nsp16140T140del1aCaa-a12B.1.1.70.000001
ORF1ab/nsp16140T140IaCaaTa22B.1.1.870.133333
ORF1ab/nsp16140T140IaCaaTa22B.1.177.150.001262
ORF1ab/nsp16140T140IaCaaTa22B.1.177.860.000367
ORF1ab/nsp16140T140IaCaaTa22B.1.177.870.001456
ORF1ab/nsp16140T140MaCAaTG22B.1.20.000018
ORF1ab/nsp16140T140IaCaaTa22B.1.2360.004107
ORF1ab/nsp16140T140IaCaaTa22B.1.2650.002541
ORF1ab/nsp16140T140RaCaaGa22B.1.3110.000549
ORF1ab/nsp16140T140IaCaaTa22B.1.3200.002491
ORF1ab/nsp16140T140SAcATcT12B.1.3510.00003
ORF1ab/nsp16140T140SAcaTca12B.1.3510.00003
ORF1ab/nsp16140T140IaCaaTa22B.1.351.20.000605
ORF1ab/nsp16140T140TacAacG22B.1.362.20.009434
ORF1ab/nsp16140T140IaCaaTa22B.1.3770.009132
ORF1ab/nsp16140T140IaCaaTa22B.1.4000.000858
ORF1ab/nsp16140T140IaCaaTa22B.1.4700.002809
ORF1ab/nsp16140T140IaCaaTa22B.1.5090.001732
ORF1ab/nsp16140T140TacAacG22B.1.5250.000226
ORF1ab/nsp16140T140IaCaaTa22B.1.6120.005305
ORF1ab/nsp16140T140KaCaaAa22B.1.617.20.000008
ORF1ab/nsp16140T140AAcaGca22B.1.617.20.000008
ORF1ab/nsp16140T140delACA---22B.1.617.20.000008
ORF1ab/nsp16140T140IaCaaTa22B.4.70.020202
ORF1ab/nsp16140T140RaCaaGa22C.370.000232
ORF1ab/nsp16140T140IaCaaTa22D.20.00015
ORF1ab/nsp16140T140IaCaaTa22N.30.011628
ORF1ab/nsp16140T140IaCaaTa22N.50.003534
ORF1ab/nsp16140T140TacAacG22P.10.000032
ORF1ab/nsp16140T140AAcaGca22P.10.000032
ORF1ab/nsp16140T140AAcaGca22P.1.10.000635
ORF1ab/nsp16140T140IaCaaTa22P.1.130.001797
ORF1ab/nsp16140T140IaCaaTa22Q.20.001227
ORF1ab/nsp16140T140IaCaaTa11A0.000387
ORF1ab/nsp16140T140del1acAac-11A0.000387
ORF1ab/nsp16140T140AAcaGca11A.2.40.003367
ORF1ab/nsp16140T140IaCaaTa11A.2.40.003367
ORF1ab/nsp16140T140TacAacG11A.2.40.003367
ORF1ab/nsp16140T140IaCaaTa11AL.10.012987
ORF1ab/nsp16140T140QACaCAa11All0
ORF1ab/nsp16140T140NaCAaAC11All0
ORF1ab/nsp16140T140VACaGTa11All0
ORF1ab/nsp16140T140IaCaaTa11AY.100.00053
ORF1ab/nsp16140T140TacAacG11AY.1020.000027
ORF1ab/nsp16140T140AAcaGca11AY.1020.000027
ORF1ab/nsp16140T140delACA---11AY.1030.000006
ORF1ab/nsp16140T140del1acAac-11AY.1030.000006
ORF1ab/nsp16140T140AAcaGca11AY.1030.000006
ORF1ab/nsp16140T140TacAacG11AY.1040.001984
ORF1ab/nsp16140T140IaCaaTa11AY.1100.000113
ORF1ab/nsp16140T140KaCaaAa11AY.1130.000142
ORF1ab/nsp16140T140IaCaaTa11AY.116.10.000311
ORF1ab/nsp16140T140TacAacG11AY.1190.000035
ORF1ab/nsp16140T140KaCaaAa11AY.1200.000037
ORF1ab/nsp16140T140delACA---11AY.1200.000037
ORF1ab/nsp16140T140IaCaaTa11AY.20.000356
ORF1ab/nsp16140T140TacAacG11AY.230.00007
ORF1ab/nsp16140T140AAcaGca11AY.230.00007
ORF1ab/nsp16140T140IaCaaTa11AY.23.10.000417
ORF1ab/nsp16140T140AAcaGca11AY.23.10.000417
ORF1ab/nsp16140T140IaCaaTa11AY.240.000431
ORF1ab/nsp16140T140RaCaaGa11AY.250.000006
ORF1ab/nsp16140T140TacAacT11AY.260.000028
ORF1ab/nsp16140T140TacAacG11AY.290.000016
ORF1ab/nsp16140T140KaCaaAa11AY.30.00001
ORF1ab/nsp16140T140TacAacG11AY.30.00001
ORF1ab/nsp16140T140IaCaaTa11AY.300.000396
ORF1ab/nsp16140T140delACA---11AY.330.000067
ORF1ab/nsp16140T140KaCaaAa11AY.330.000067
ORF1ab/nsp16140T140TacAacC11AY.380.000499
ORF1ab/nsp16140T140RaCaaGa11AY.390.000025
ORF1ab/nsp16140T140IaCaaTa11AY.4.10.000737
ORF1ab/nsp16140T140TacAacG11AY.4.20.000022
ORF1ab/nsp16140T140IaCaaTa11AY.4.30.000842
ORF1ab/nsp16140T140AAcaGca11AY.430.000004
ORF1ab/nsp16140T140delACA---11AY.430.000004
ORF1ab/nsp16140T140AAcaGca11AY.450.000122
ORF1ab/nsp16140T140TacAacG11AY.460.000104
ORF1ab/nsp16140T140KaCaaAa11AY.46.50.000198
ORF1ab/nsp16140T140del1acAac-11AY.470.000031
ORF1ab/nsp16140T140KaCaaAa11AY.470.000031
ORF1ab/nsp16140T140PAcaCca11AY.470.000031
ORF1ab/nsp16140T140RaCaaGa11AY.50.000021
ORF1ab/nsp16140T140IaCaaTa11AY.510.000909
ORF1ab/nsp16140T140del1acAac-11AY.540.000095
ORF1ab/nsp16140T140TacAacC11AY.540.000095
ORF1ab/nsp16140T140TacAacG11AY.550.000917
ORF1ab/nsp16140T140TacAacC11AY.610.000105
ORF1ab/nsp16140T140IaCaaTa11AY.690.000187
ORF1ab/nsp16140T140IaCaaTa11AY.7.10.000113
ORF1ab/nsp16140T140AAcaGca11AY.750.000056
ORF1ab/nsp16140T140IaCaaTa11AY.820.001357
ORF1ab/nsp16140T140IaCaaTa11AY.830.001724
ORF1ab/nsp16140T140IaCaaTa11AY.840.000437
ORF1ab/nsp16140T140AAcaGca11AY.840.000437
ORF1ab/nsp16140T140IaCaaTa11AY.860.00083
ORF1ab/nsp16140T140KaCaaAa11AY.9.10.000084
ORF1ab/nsp16140T140del1acAac-11AY.9.20.000037
ORF1ab/nsp16140T140IaCaaTa11AY.910.00073
ORF1ab/nsp16140T140IaCaaTa11AY.930.000273
ORF1ab/nsp16140T140IaCaaTa11AY.980.000079
ORF1ab/nsp16140T140del1acAac-11B0.000128
ORF1ab/nsp16140T140SAcaTca11B.10.000009
ORF1ab/nsp16140T140PAcaCca11B.10.000009
ORF1ab/nsp16140T140NaCAaAC11B.10.000009
ORF1ab/nsp16140T140del1acAac-11B.1.10.000018
ORF1ab/nsp16140T140IaCaaTa11B.1.1.1330.008475
ORF1ab/nsp16140T140AAcaGca11B.1.1.1410.002012
ORF1ab/nsp16140T140IaCaaTa11B.1.1.1760.000439
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2290.005747
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2310.003096
ORF1ab/nsp16140T140TacAacG11B.1.1.2410.00207
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2650.003155
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2790.001121
ORF1ab/nsp16140T140TacAacC11B.1.1.280.000311
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2800.003086
ORF1ab/nsp16140T140KaCaaAa11B.1.1.2840.000107
ORF1ab/nsp16140T140IaCaaTa11B.1.1.2980.000862
ORF1ab/nsp16140T140IaCaaTa11B.1.1.3040.002809
ORF1ab/nsp16140T140delACA---11B.1.1.3110.000358
ORF1ab/nsp16140T140TacAacG11B.1.1.3160.000925
ORF1ab/nsp16140T140IaCaaTa11B.1.1.3260.001761
ORF1ab/nsp16140T140RaCaaGa11B.1.1.3680.003086
ORF1ab/nsp16140T140IaCaaTa11B.1.1.3690.000446
ORF1ab/nsp16140T140IaCaaTa11B.1.1.4330.001425
ORF1ab/nsp16140T140IaCaaTa11B.1.1.4420.018519
ORF1ab/nsp16140T140del1acAac-11B.1.1.5190.00004
ORF1ab/nsp16140T140KaCaaAa11B.1.1.5190.00004
ORF1ab/nsp16140T140IaCaaTa11B.1.1.5250.005464
ORF1ab/nsp16140T140IaCaaTa11B.1.1.540.003021
ORF1ab/nsp16140T140delACA---11B.1.1.700.000341
ORF1ab/nsp16140T140IaCaaTa11B.1.1.80.003584
ORF1ab/nsp16140T140del1aCAa-N11B.1.1570.002985
ORF1ab/nsp16140T140KaCaaAa11B.1.1600.000031
ORF1ab/nsp16140T140IaCaaTa11B.1.160.200.008929
ORF1ab/nsp16140T140IaCaaTa11B.1.160.280.002924
ORF1ab/nsp16140T140TacAacG11B.1.1770.000013
ORF1ab/nsp16140T140delACA---11B.1.1770.000013
ORF1ab/nsp16140T140RaCaaGa11B.1.1770.000013
ORF1ab/nsp16140T140IaCaaTa11B.1.177.120.000152
ORF1ab/nsp16140T140IaCaaTa11B.1.177.170.000821
ORF1ab/nsp16140T140IaCaaTa11B.1.177.350.000691
ORF1ab/nsp16140T140AAcaGca11B.1.177.40.000211
ORF1ab/nsp16140T140IaCaaTa11B.1.177.40.000211
ORF1ab/nsp16140T140delACA---11B.1.177.40.000211
ORF1ab/nsp16140T140KaCaaAa11B.1.177.440.000519
ORF1ab/nsp16140T140SAcaTca11B.1.177.440.000519
ORF1ab/nsp16140T140IaCaaTa11B.1.177.510.004566
ORF1ab/nsp16140T140delACA---11B.1.177.540.000606
ORF1ab/nsp16140T140IaCaaTa11B.1.177.570.000281
ORF1ab/nsp16140T140delACA---11B.1.177.620.001192
ORF1ab/nsp16140T140delACA---11B.1.177.70.000165
ORF1ab/nsp16140T140IaCaaTa11B.1.177.770.000726
ORF1ab/nsp16140T140AAcaGca11B.1.177.80.000752
ORF1ab/nsp16140T140del1aCaa-a11B.1.177.830.001481
ORF1ab/nsp16140T140delACA---11B.1.177.90.001332
ORF1ab/nsp16140T140SAcaTca11B.1.20.000009
ORF1ab/nsp16140T140IaCaaTa11B.1.220.001318
ORF1ab/nsp16140T140KaCaaAa11B.1.2210.000071
ORF1ab/nsp16140T140AAcaGca11B.1.2210.000071
ORF1ab/nsp16140T140TacAacT11B.1.2210.000071
ORF1ab/nsp16140T140IaCaaTa11B.1.2390.001221
ORF1ab/nsp16140T140IaCaaTa11B.1.243.10.022222
ORF1ab/nsp16140T140delACA---11B.1.2580.000067
ORF1ab/nsp16140T140RaCaaGa11B.1.2580.000067
ORF1ab/nsp16140T140IaCaaTa11B.1.3110.000275
ORF1ab/nsp16140T140IaCaaTa11B.1.3130.006579
ORF1ab/nsp16140T140IaCaaTa11B.1.3460.001311
ORF1ab/nsp16140T140RaCaaGa11B.1.3510.00003
ORF1ab/nsp16140T140TacAacT11B.1.3510.00003
ORF1ab/nsp16140T140IaCaaTa11B.1.360.000146
ORF1ab/nsp16140T140delACA---11B.1.360.000146
ORF1ab/nsp16140T140IaCaaTa11B.1.36.180.00042
ORF1ab/nsp16140T140IaCaaTa11B.1.36.210.00216
ORF1ab/nsp16140T140KaCaaAa11B.1.36.220.001208
ORF1ab/nsp16140T140IaCaaTa11B.1.3690.000285
ORF1ab/nsp16140T140KaCaaAa11B.1.438.10.000107
ORF1ab/nsp16140T140IaCaaTa11B.1.4530.003236
ORF1ab/nsp16140T140IaCaaTa11B.1.4560.003268
ORF1ab/nsp16140T140KaCaaAa11B.1.466.20.000391
ORF1ab/nsp16140T140IaCaaTa11B.1.4710.002732
ORF1ab/nsp16140T140IaCaaTa11B.1.4980.020408
ORF1ab/nsp16140T140IaCaaTa11B.1.5030.002488
ORF1ab/nsp16140T140del1acAac-11B.1.5160.001957
ORF1ab/nsp16140T140delACA---11B.1.5250.000113
ORF1ab/nsp16140T140IaCaaTa11B.1.5300.007143
ORF1ab/nsp16140T140IaCaaTa11B.1.5400.009709
ORF1ab/nsp16140T140IaCaaTa11B.1.5600.00463
ORF1ab/nsp16140T140TacAacG11B.1.5610.000397
ORF1ab/nsp16140T140IaCaaTa11B.1.5640.000426
ORF1ab/nsp16140T140del1aCaa-a11B.1.5640.000426
ORF1ab/nsp16140T140IaCaaTa11B.1.5760.000907
ORF1ab/nsp16140T140IaCaaTa11B.1.5810.009434
ORF1ab/nsp16140T140del1acAac-11B.1.5890.007576
ORF1ab/nsp16140T140IaCaaTa11B.1.5890.007576
ORF1ab/nsp16140T140QACaCAa11B.1.5960.000087
ORF1ab/nsp16140T140TacAacG11B.1.5960.000087
ORF1ab/nsp16140T140VACaGTa11B.1.617.20.000004
ORF1ab/nsp16140T140IaCaaTa11B.1.6180.004032
ORF1ab/nsp16140T140delACA---11B.1.6200.000946
ORF1ab/nsp16140T140IaCaaTa11B.1.6270.00202
ORF1ab/nsp16140T140IaCaaTa11B.1.6280.000352
ORF1ab/nsp16140T140del1acAac-11B.1.6360.006711
ORF1ab/nsp16140T140IaCaaTa11B.1.930.000934
ORF1ab/nsp16140T140IaCaaTa11B.270.015385
ORF1ab/nsp16140T140KaCaaAa11B.290.003509
ORF1ab/nsp16140T140IaCaaTa11B.30.000831
ORF1ab/nsp16140T140TacAacG11B.310.003731
ORF1ab/nsp16140T140delACA---11B.340.013699
ORF1ab/nsp16140T140IaCaaTa11C.10.002392
ORF1ab/nsp16140T140IaCaaTa11C.270.018519
ORF1ab/nsp16140T140IaCaaTa11C.310.017857
ORF1ab/nsp16140T140IaCaaTa11C.360.000911
ORF1ab/nsp16140T140TacAacC11D.20.000075
ORF1ab/nsp16140T140RaCaaGa11P.10.000016
ORF1ab/nsp16140T140IaCaaTa11P.1.10.000318
ORF1ab/nsp16140T140SAcaTca11P.1.10.000318
ORF1ab/nsp16140T140IaCaaTa11P.1.160.000374
ORF1ab/nsp16140T140IaCaaTa11P.70.004367
ORF1ab/nsp16140T140delACA---11U.30.003861