CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 116 & Codon = gTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16116A116VA6914VnonsyngCagTa292929240.99829321004-21006

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16116A116VgCagTa29242929All0.000559
ORF1ab/nsp16116A116VgCagTa537537B.1.1.70.000481
ORF1ab/nsp16116A116VgCagTa406406AY.330.027112
ORF1ab/nsp16116A116VgCagTa357357AY.40.000556
ORF1ab/nsp16116A116VgCagTa119119AY.290.001877
ORF1ab/nsp16116A116VgCagTa118118P.10.001859
ORF1ab/nsp16116A116VgCagTa117117AY.440.000712
ORF1ab/nsp16116A116VgCagTa106106AY.29.10.023374
ORF1ab/nsp16116A116VgCagTa9191B.1.617.20.000343
ORF1ab/nsp16116A116VgCagTa8080B.1.20.000704
ORF1ab/nsp16116A116VgCagTa6868B.10.000623
ORF1ab/nsp16116A116VgCagTa6262AY.430.000275
ORF1ab/nsp16116A116VgCagTa5757AY.1030.000354
ORF1ab/nsp16116A116VgCagTa5757B.1.1770.000751
ORF1ab/nsp16116A116VgCagTa5353AY.420.002132
ORF1ab/nsp16116A116VgCagTa4949B.1.10.000889
ORF1ab/nsp16116A116VgCagTa4545AY.1190.001589
ORF1ab/nsp16116A116VgCagTa4040B.1.4270.00202
ORF1ab/nsp16116A116VgCagTa3333D.20.002476
ORF1ab/nsp16116A116VgCagTa3131AY.250.000186
ORF1ab/nsp16116A116VgCagTa2929AY.30.000288
ORF1ab/nsp16116A116VgCagTa2323AY.1170.001944
ORF1ab/nsp16116A116VgCagTa2323B.1.1.5260.08156
ORF1ab/nsp16116A116VgCagTa2121B.1.5260.000494
ORF1ab/nsp16116A116VgCagTa1717B.1.930.015873
ORF1ab/nsp16116A116VgCagTa1414AY.46.60.001011
ORF1ab/nsp16116A116VgCagTa1111B.1.4970.003462
ORF1ab/nsp16116A116VgCagTa1111B.1.5160.021526
ORF1ab/nsp16116A116VgCagTa1010AY.270.000647
ORF1ab/nsp16116A116VgCagTa1010AY.470.000311
ORF1ab/nsp16116A116VgCagTa910B.1.2210.000639
ORF1ab/nsp16116A116VgCagTa99AY.1000.000414
ORF1ab/nsp16116A116VgCagTa99B.1.5960.000784
ORF1ab/nsp16116A116VgCagTa88B.1.2430.000557
ORF1ab/nsp16116A116VgCagTa77AY.390.000173
ORF1ab/nsp16116A116VgCagTa77AY.610.000733
ORF1ab/nsp16116A116VgCagTa260.111111
ORF1ab/nsp16116A116VgCagTa66AY.3.10.000512
ORF1ab/nsp16116A116VgCagTa66AY.4.20.00013
ORF1ab/nsp16116A116VgCagTa66AY.450.00073
ORF1ab/nsp16116A116VgCagTa66AY.460.000624
ORF1ab/nsp16116A116VgCagTa66AY.50.000124
ORF1ab/nsp16116A116VgCagTa66B0.000767
ORF1ab/nsp16116A116VgCagTa66B.1.1.630.002315
ORF1ab/nsp16116A116VgCagTa66B.1.438.10.000644
ORF1ab/nsp16116A116VgCagTa66Q.40.002729
ORF1ab/nsp16116A116VgCagTa55AY.1020.000133
ORF1ab/nsp16116A116VgCagTa55AY.1180.000313
ORF1ab/nsp16116A116VgCagTa55AY.260.000142
ORF1ab/nsp16116A116VgCagTa55AY.90.000338
ORF1ab/nsp16116A116VgCagTa55B.1.177.120.000758
ORF1ab/nsp16116A116VgCagTa55B.1.36.10.005701
ORF1ab/nsp16116A116VgCagTa55B.1.6370.000365
ORF1ab/nsp16116A116VgCagTa55Q.10.000632
ORF1ab/nsp16116A116VgCagTa44AY.1200.000149
ORF1ab/nsp16116A116VgCagTa44AY.9.20.000147
ORF1ab/nsp16116A116VgCagTa44B.1.1.3170.001647
ORF1ab/nsp16116A116VgCagTa44B.1.160.290.016878
ORF1ab/nsp16116A116VgCagTa44B.1.177.860.000734
ORF1ab/nsp16116A116VgCagTa44B.1.1950.020101
ORF1ab/nsp16116A116VgCagTa33AY.1210.000406
ORF1ab/nsp16116A116VgCagTa33AY.46.30.002801
ORF1ab/nsp16116A116VgCagTa33AY.99.20.000276
ORF1ab/nsp16116A116VgCagTa33B.1.1.280.000934
ORF1ab/nsp16116A116VgCagTa33B.1.1.2850.019608
ORF1ab/nsp16116A116VgCagTa33B.1.1.390.001529
ORF1ab/nsp16116A116VgCagTa33B.1.1600.000094
ORF1ab/nsp16116A116VgCagTa33B.1.177.210.000229
ORF1ab/nsp16116A116VgCagTa33B.1.3510.000089
ORF1ab/nsp16116A116VgCagTa33B.1.4290.000071
ORF1ab/nsp16116A116VgCagTa33B.30.002492
ORF1ab/nsp16116A116VgCagTa33P.1.70.000958
ORF1ab/nsp16116A116VgCagTa22AY.200.000078
ORF1ab/nsp16116A116VgCagTa22AY.350.000466
ORF1ab/nsp16116A116VgCagTa22AY.370.000632
ORF1ab/nsp16116A116VgCagTa22AY.480.00093
ORF1ab/nsp16116A116VgCagTa22AY.590.001059
ORF1ab/nsp16116A116VgCagTa22AY.850.000854
ORF1ab/nsp16116A116VgCagTa22AY.920.000575
ORF1ab/nsp16116A116VgCagTa22AY.940.000885
ORF1ab/nsp16116A116VgCagTa22AY.98.10.000097
ORF1ab/nsp16116A116VgCagTa22AZ.50.007018
ORF1ab/nsp16116A116VgCagTa22B.1.1.2770.001517
ORF1ab/nsp16116A116VgCagTa22B.1.1.3120.003824
ORF1ab/nsp16116A116VgCagTa22B.1.1.5190.000079
ORF1ab/nsp16116A116VgCagTa22B.1.177.690.002967
ORF1ab/nsp16116A116VgCagTa22B.1.177.810.000379
ORF1ab/nsp16116A116VgCagTa22B.1.360.000292
ORF1ab/nsp16116A116VgCagTa22B.1.3800.013245
ORF1ab/nsp16116A116VgCagTa22B.1.5510.002581
ORF1ab/nsp16116A116VgCagTa22B.1.6280.000705
ORF1ab/nsp16116A116VgCagTa22C.370.000232
ORF1ab/nsp16116A116VgCagTa22P.1.10.000635
ORF1ab/nsp16116A116VgCagTa22P.1.100.000539
ORF1ab/nsp16116A116VgCagTa22P.1.120.000968
ORF1ab/nsp16116A116VgCagTa22P.1.140.000096
ORF1ab/nsp16116A116VgCagTa22R.10.00018
ORF1ab/nsp16116A116VgCagTa11A0.000387
ORF1ab/nsp16116A116VgCagTa11A.10.000282
ORF1ab/nsp16116A116VgCagTa11A.2.50.000499
ORF1ab/nsp16116A116VgCagTa11A.210.00277
ORF1ab/nsp16116A116VgCagTa11A.23.10.000704
ORF1ab/nsp16116A116VgCagTa11A.270.001656
ORF1ab/nsp16116A116VgCagTa11AU.10.001266
ORF1ab/nsp16116A116VgCagTa11AY.1050.000643
ORF1ab/nsp16116A116VgCagTa11AY.1090.00074
ORF1ab/nsp16116A116VgCagTa11AY.1110.000183
ORF1ab/nsp16116A116VgCagTa11AY.1130.000142
ORF1ab/nsp16116A116VgCagTa11AY.116.10.000311
ORF1ab/nsp16116A116VgCagTa11AY.300.000396
ORF1ab/nsp16116A116VgCagTa11AY.34.10.00051
ORF1ab/nsp16116A116VgCagTa11AY.360.000148
ORF1ab/nsp16116A116VgCagTa11AY.380.000499
ORF1ab/nsp16116A116VgCagTa11AY.4.2.10.000149
ORF1ab/nsp16116A116VgCagTa11AY.400.000964
ORF1ab/nsp16116A116VgCagTa11AY.530.000288
ORF1ab/nsp16116A116VgCagTa11AY.60.000041
ORF1ab/nsp16116A116VgCagTa11AY.620.000436
ORF1ab/nsp16116A116VgCagTa11AY.710.000475
ORF1ab/nsp16116A116VgCagTa11AY.750.000056
ORF1ab/nsp16116A116VgCagTa11AY.820.001357
ORF1ab/nsp16116A116VgCagTa11AY.840.000437
ORF1ab/nsp16116A116VgCagTa11B.1.1.130.035714
ORF1ab/nsp16116A116VgCagTa11B.1.1.1640.005155
ORF1ab/nsp16116A116VgCagTa11B.1.1.1980.001468
ORF1ab/nsp16116A116VgCagTa11B.1.1.2070.001182
ORF1ab/nsp16116A116VgCagTa11B.1.1.2140.000055
ORF1ab/nsp16116A116VgCagTa11B.1.1.2220.000204
ORF1ab/nsp16116A116VgCagTa11B.1.1.2790.001121
ORF1ab/nsp16116A116VgCagTa11B.1.1.2840.000107
ORF1ab/nsp16116A116VgCagTa11B.1.1.3060.000438
ORF1ab/nsp16116A116VgCagTa11B.1.1.3220.008772
ORF1ab/nsp16116A116VgCagTa11B.1.1.3260.001761
ORF1ab/nsp16116A116VgCagTa11B.1.1.330.000421
ORF1ab/nsp16116A116VgCagTa11B.1.1.3480.000796
ORF1ab/nsp16116A116VgCagTa11B.1.1.370.000193
ORF1ab/nsp16116A116VgCagTa11B.1.1.4030.025641
ORF1ab/nsp16116A116VgCagTa11B.1.1.4340.000349
ORF1ab/nsp16116A116VgCagTa11B.1.1.500.000679
ORF1ab/nsp16116A116VgCagTa11B.1.110.30.000718
ORF1ab/nsp16116A116VgCagTa11B.1.1570.002985
ORF1ab/nsp16116A116VgCagTa11B.1.177.440.000519
ORF1ab/nsp16116A116VgCagTa11B.1.177.70.000165
ORF1ab/nsp16116A116VgCagTa11B.1.177.730.000566
ORF1ab/nsp16116A116VgCagTa11B.1.1890.004292
ORF1ab/nsp16116A116VgCagTa11B.1.2060.000816
ORF1ab/nsp16116A116VgCagTa11B.1.214.10.02
ORF1ab/nsp16116A116VgCagTa11B.1.214.20.0006
ORF1ab/nsp16116A116VgCagTa11B.1.2340.000132
ORF1ab/nsp16116A116VgCagTa11B.1.3360.002439
ORF1ab/nsp16116A116VgCagTa11B.1.3560.001727
ORF1ab/nsp16116A116VgCagTa11B.1.36.20.010753
ORF1ab/nsp16116A116VgCagTa11B.1.3690.000285
ORF1ab/nsp16116A116VgCagTa11B.1.3770.004566
ORF1ab/nsp16116A116VgCagTa11B.1.3810.007812
ORF1ab/nsp16116A116VgCagTa11B.1.3960.000706
ORF1ab/nsp16116A116VgCagTa11B.1.4220.000812
ORF1ab/nsp16116A116VgCagTa11B.1.4410.009615
ORF1ab/nsp16116A116VgCagTa11B.1.4620.007246
ORF1ab/nsp16116A116VgCagTa11B.1.5250.000113
ORF1ab/nsp16116A116VgCagTa11B.1.5650.00081
ORF1ab/nsp16116A116VgCagTa11B.1.5800.004065
ORF1ab/nsp16116A116VgCagTa11B.1.617.10.000129
ORF1ab/nsp16116A116VgCagTa11B.290.003509
ORF1ab/nsp16116A116VgCagTa11B.400.000364
ORF1ab/nsp16116A116VgCagTa11B.60.00091
ORF1ab/nsp16116A116VgCagTa11C.110.010638
ORF1ab/nsp16116A116VgCagTa11C.270.018519
ORF1ab/nsp16116A116VgCagTa11P.1.150.000232
ORF1ab/nsp16116A116VgCagTa11Q.70.001111
ORF1ab/nsp16116A116VgCagTa11Q.80.000165