CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp16 : CodonNum = 116 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp16116A116SA6914SnonsynGcaTca566656590.99876521004-21006

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp16116A116SGcaTca56595666All0.001082
ORF1ab/nsp16116A116SGcaTca11851185AZ.20.972906
ORF1ab/nsp16116A116SGcaTca11501150AZ.10.997398
ORF1ab/nsp16116A116SGcaTca626626AZ.30.951368
ORF1ab/nsp16116A116SGcaTca526526B.1.1.70.000471
ORF1ab/nsp16116A116SGcaTca223223AY.40.000347
ORF1ab/nsp16116A116SGcaTca182182B.1.20.001603
ORF1ab/nsp16116A116SGcaTca176176B.1.617.20.000663
ORF1ab/nsp16116A116SGcaTca148148B.1.1.3180.044659
ORF1ab/nsp16116A116SGcaTca123123P.1.140.00588
ORF1ab/nsp16116A116SGcaTca122122AZ.2.10.99187
ORF1ab/nsp16116A116SGcaTca111111P.1.70.035441
ORF1ab/nsp16116A116SGcaTca9999AY.430.000439
ORF1ab/nsp16116A116SGcaTca9292AY.260.002605
ORF1ab/nsp16116A116SGcaTca9191B.1.5250.010298
ORF1ab/nsp16116A116SGcaTca8282AY.440.000499
ORF1ab/nsp16116A116SGcaTca6969AY.1030.000428
ORF1ab/nsp16116A116SGcaTca4747B.1.10.000853
ORF1ab/nsp16116A116SGcaTca4040B.10.000366
ORF1ab/nsp16116A116SGcaTca3636AY.1180.002255
ORF1ab/nsp16116A116SGcaTca3232AY.1020.000848
ORF1ab/nsp16116A116SGcaTca2525AY.250.00015
ORF1ab/nsp16116A116SGcaTca2323B.1.1600.000717
ORF1ab/nsp16116A116SGcaTca2121AU.20.050847
ORF1ab/nsp16116A116SGcaTca1818AY.200.0007
ORF1ab/nsp16116A116SGcaTca1818AY.290.000284
ORF1ab/nsp16116A116SGcaTca1515AY.750.00084
ORF1ab/nsp16116A116SGcaTca1515B.1.1.5190.000596
ORF1ab/nsp16116A116SGcaTca1414B0.001789
ORF1ab/nsp16116A116SGcaTca1313B.1.4290.000306
ORF1ab/nsp16116A116SGcaTca1212B.1.1770.000158
ORF1ab/nsp16116A116SGcaTca1111A.290.058511
ORF1ab/nsp16116A116SGcaTca1111AY.390.000272
ORF1ab/nsp16116A116SGcaTca1010AY.1000.00046
ORF1ab/nsp16116A116SGcaTca490.222222
ORF1ab/nsp16116A116SGcaTca99AY.1190.000318
ORF1ab/nsp16116A116SGcaTca99AY.330.000601
ORF1ab/nsp16116A116SGcaTca99B.1.160.260.021792
ORF1ab/nsp16116A116SGcaTca88B.1.3110.002197
ORF1ab/nsp16116A116SGcaTca88B.1.4270.000404
ORF1ab/nsp16116A116SGcaTca88B.1.6300.041885
ORF1ab/nsp16116A116SGcaTca77AY.120.002212
ORF1ab/nsp16116A116SGcaTca77C.140.030303
ORF1ab/nsp16116A116SGcaTca77P.10.00011
ORF1ab/nsp16116A116SGcaTca66AY.30.00006
ORF1ab/nsp16116A116SGcaTca66AY.4.20.00013
ORF1ab/nsp16116A116SGcaTca66B.1.1.2910.004454
ORF1ab/nsp16116A116SGcaTca66B.1.5260.000141
ORF1ab/nsp16116A116SGcaTca66B.1.5960.000523
ORF1ab/nsp16116A116SGcaTca66N.50.010601
ORF1ab/nsp16116A116SGcaTca55AY.120.10.001605
ORF1ab/nsp16116A116SGcaTca55AY.420.000201
ORF1ab/nsp16116A116SGcaTca55AY.470.000156
ORF1ab/nsp16116A116SGcaTca55AY.540.000477
ORF1ab/nsp16116A116SGcaTca55B.1.360.00073
ORF1ab/nsp16116A116SGcaTca44AY.1210.000541
ORF1ab/nsp16116A116SGcaTca44AY.140.000352
ORF1ab/nsp16116A116SGcaTca44AY.46.40.000658
ORF1ab/nsp16116A116SGcaTca44AY.9.20.000147
ORF1ab/nsp16116A116SGcaTca44AY.920.001149
ORF1ab/nsp16116A116SGcaTca44B.1.1.2840.00043
ORF1ab/nsp16116A116SGcaTca24B.1.2210.000142
ORF1ab/nsp16116A116SGcaTca44B.1.2340.000528
ORF1ab/nsp16116A116SGcaTca44B.1.2580.000266
ORF1ab/nsp16116A116SGcaTca44B.1.6210.000354
ORF1ab/nsp16116A116SGcaTca33AY.1080.003308
ORF1ab/nsp16116A116SGcaTca33AY.1170.000254
ORF1ab/nsp16116A116SGcaTca33AY.1200.000112
ORF1ab/nsp16116A116SGcaTca33AY.370.000948
ORF1ab/nsp16116A116SGcaTca33AY.4.50.000322
ORF1ab/nsp16116A116SGcaTca33AY.720.004082
ORF1ab/nsp16116A116SGcaTca33AY.90.000203
ORF1ab/nsp16116A116SGcaTca33B.1.1.3260.005282
ORF1ab/nsp16116A116SGcaTca33P.1.100.000808
ORF1ab/nsp16116A116SGcaTca22A.300.285714
ORF1ab/nsp16116A116SGcaTca22AY.230.000139
ORF1ab/nsp16116A116SGcaTca22AY.46.60.000144
ORF1ab/nsp16116A116SGcaTca22AY.550.001835
ORF1ab/nsp16116A116SGcaTca22AY.75.10.000361
ORF1ab/nsp16116A116SGcaTca22AY.9.10.000167
ORF1ab/nsp16116A116SGcaTca22B.1.1.2070.002364
ORF1ab/nsp16116A116SGcaTca22B.1.1.3170.000823
ORF1ab/nsp16116A116SGcaTca22B.1.1.330.000842
ORF1ab/nsp16116A116SGcaTca22B.1.1.3370.007194
ORF1ab/nsp16116A116SGcaTca22B.1.177.440.001038
ORF1ab/nsp16116A116SGcaTca22B.1.3510.000059
ORF1ab/nsp16116A116SGcaTca22C.160.002121
ORF1ab/nsp16116A116SGcaTca22C.370.000232
ORF1ab/nsp16116A116SGcaTca22C.380.016129
ORF1ab/nsp16116A116SGcaTca22D.20.00015
ORF1ab/nsp16116A116SGcaTca11A.10.000282
ORF1ab/nsp16116A116SGcaTca11A.280.002646
ORF1ab/nsp16116A116SGcaTca11AT.10.005128
ORF1ab/nsp16116A116SGcaTca11AY.1050.000643
ORF1ab/nsp16116A116SGcaTca11AY.1100.000113
ORF1ab/nsp16116A116SGcaTca11AY.1130.000142
ORF1ab/nsp16116A116SGcaTca11AY.120.2.10.000498
ORF1ab/nsp16116A116SGcaTca11AY.160.00038
ORF1ab/nsp16116A116SGcaTca11AY.23.10.000417
ORF1ab/nsp16116A116SGcaTca11AY.34.10.00051
ORF1ab/nsp16116A116SGcaTca11AY.350.000233
ORF1ab/nsp16116A116SGcaTca11AY.4.10.000737
ORF1ab/nsp16116A116SGcaTca11AY.410.000294
ORF1ab/nsp16116A116SGcaTca11AY.450.000122
ORF1ab/nsp16116A116SGcaTca11AY.460.000104
ORF1ab/nsp16116A116SGcaTca11AY.50.000021
ORF1ab/nsp16116A116SGcaTca11AY.5.20.002463
ORF1ab/nsp16116A116SGcaTca11AY.5.40.000277
ORF1ab/nsp16116A116SGcaTca11AY.530.000288
ORF1ab/nsp16116A116SGcaTca11AY.560.001605
ORF1ab/nsp16116A116SGcaTca11AY.740.000116
ORF1ab/nsp16116A116SGcaTca11AY.980.000079
ORF1ab/nsp16116A116SGcaTca11AY.98.10.000048
ORF1ab/nsp16116A116SGcaTca11B.1.1.10.000327
ORF1ab/nsp16116A116SGcaTca11B.1.1.1290.009174
ORF1ab/nsp16116A116SGcaTca11B.1.1.2160.00089
ORF1ab/nsp16116A116SGcaTca11B.1.1.280.000311
ORF1ab/nsp16116A116SGcaTca11B.1.1.3970.002252
ORF1ab/nsp16116A116SGcaTca11B.1.1470.000756
ORF1ab/nsp16116A116SGcaTca11B.1.160.300.002976
ORF1ab/nsp16116A116SGcaTca11B.1.160.330.004425
ORF1ab/nsp16116A116SGcaTca11B.1.177.170.000821
ORF1ab/nsp16116A116SGcaTca11B.1.177.210.000076
ORF1ab/nsp16116A116SGcaTca11B.1.177.40.000211
ORF1ab/nsp16116A116SGcaTca11B.1.177.530.002392
ORF1ab/nsp16116A116SGcaTca11B.1.2370.004975
ORF1ab/nsp16116A116SGcaTca11B.1.2430.00007
ORF1ab/nsp16116A116SGcaTca11B.1.2510.021739
ORF1ab/nsp16116A116SGcaTca11B.1.3060.005714
ORF1ab/nsp16116A116SGcaTca11B.1.36.290.000517
ORF1ab/nsp16116A116SGcaTca11B.1.36.80.001
ORF1ab/nsp16116A116SGcaTca11B.1.3960.000706
ORF1ab/nsp16116A116SGcaTca11B.1.466.20.000391
ORF1ab/nsp16116A116SGcaTca11B.1.5300.007143
ORF1ab/nsp16116A116SGcaTca11B.1.5430.01
ORF1ab/nsp16116A116SGcaTca11B.1.5600.00463
ORF1ab/nsp16116A116SGcaTca11B.1.5610.000397
ORF1ab/nsp16116A116SGcaTca11B.1.5650.00081
ORF1ab/nsp16116A116SGcaTca11B.1.5730.006098
ORF1ab/nsp16116A116SGcaTca11B.1.5760.000907
ORF1ab/nsp16116A116SGcaTca11B.1.5970.00463
ORF1ab/nsp16116A116SGcaTca11B.1.6030.010638
ORF1ab/nsp16116A116SGcaTca11B.1.617.10.000129
ORF1ab/nsp16116A116SGcaTca11B.1.6180.004032
ORF1ab/nsp16116A116SGcaTca11B.1.6200.000946
ORF1ab/nsp16116A116SGcaTca11P.1.160.000374
ORF1ab/nsp16116A116SGcaTca11P.1.80.004785
ORF1ab/nsp16116A116SGcaTca11Q.20.000613
ORF1ab/nsp16116A116SGcaTca11Q.80.000165